ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479265.1| Oryza sativa (japonica cultivar-group), mRNA 180 3e-42
2gb|AY740016.1| Oryza sativa (japonica cultivar-group) SNARE 13 (... 180 3e-42
3dbj|AK067595.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
4ref|NM_184930.1| Oryza sativa (japonica cultivar-group), mRNA 139 1e-29
5gb|AY740015.1| Oryza sativa (japonica cultivar-group) SNARE 12 (... 139 1e-29
6dbj|AK064875.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
7gb|AY108420.1| Zea mays PCO101160 mRNA sequence 135 2e-28
8gb|AY108575.1| Zea mays PCO097136 mRNA sequence 111 2e-21
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
10dbj|AP003749.3| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 84 5e-13
12gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 84 5e-13
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
14gb|AY740014.1| Oryza sativa (japonica cultivar-group) SNARE 11 (... 52 0.002
15dbj|AK058743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
16gb|AY105466.1| Zea mays PCO148690 mRNA sequence 52 0.002
17ref|NM_129072.3| Arabidopsis thaliana NPSN11 (NOVEL PLANT SNARE ... 48 0.029
18gb|AY143839.1| Arabidopsis thaliana At2g35190/T4C15.14 mRNA, com... 48 0.029
19gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map... 48 0.029
20gb|AF439822.1|AF439822 Arabidopsis thaliana At2g35190/T4C15.14 m... 48 0.029
21emb|BX820006.1|CNS0A8FE Arabidopsis thaliana Full-length cDNA Co... 48 0.029
22emb|BX819205.1|CNS0A7Y3 Arabidopsis thaliana Full-length cDNA Co... 48 0.029
23gb|AY112317.1| Zea mays CL2771_1 mRNA sequence 44 0.45
24gb|AC104203.11| Mus musculus chromosome 5, clone RP24-301M6, com... 42 1.8
25emb|AL138897.10| Human DNA sequence from clone RP11-231D11 on ch... 42 1.8
26gb|AC149039.2| Medicago truncatula chromosome 7 BAC clone mth2-4... 40 7.0
27gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.0
28gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, com... 40 7.0
29ref|NG_000004.2| Homo sapiens cytochrome P450, family 3, subfami... 40 7.0
30gb|AC146392.5| Pan troglodytes BAC clone RP43-57L13 from 7, comp... 40 7.0
31gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 7.0
32ref|XM_451805.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B06039g ... 40 7.0
33emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 7.0
34emb|CR717340.2|CNS0GGG2 Tetraodon nigroviridis full-length cDNA 40 7.0
35emb|CR711472.2|CNS0GBX8 Tetraodon nigroviridis full-length cDNA 40 7.0
36emb|CR705472.2|CNS0G7AK Tetraodon nigroviridis full-length cDNA 40 7.0
37gb|AC073387.4| Homo sapiens BAC clone RP11-10E6 from 7, complete... 40 7.0
38gb|AC146586.2| Medicago truncatula clone mth2-71m12, complete se... 40 7.0
39gb|AC160107.2| Mus musculus BAC clone RP24-252N17 from chromosom... 40 7.0
40emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 7.0
41gb|AC146862.24| Medicago truncatula clone mth2-174p12, complete ... 40 7.0
42gb|AC162161.9| Medicago truncatula clone mth2-2g22, complete seq... 40 7.0
43gb|AC174352.7| Medicago truncatula clone mth2-7o1, complete sequ... 40 7.0
44gb|AC090858.6| Homo sapiens chromosome 11, clone RP11-676E14, co... 40 7.0
45gb|AC108460.5| Homo sapiens chromosome 11, clone CTD-2302A16, co... 40 7.0
46gb|AC021436.8| Homo sapiens chromosome , clone RP11-121C18, comp... 40 7.0
47emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, c... 40 7.0
48emb|BX294186.9| Zebrafish DNA sequence from clone DKEY-170O10 in... 40 7.0
49ref|XM_572068.1| Cryptococcus neoformans var. neoformans JEC21 c... 40 7.0
50dbj|AK040611.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 7.0
51gb|AF209389.1|AF209389 Homo sapiens cytochrome P450 IIIA4 (CYP3A... 40 7.0
52gb|AC069294.5|AC069294 Homo sapiens BAC clone RP11-757A13 from 7... 40 7.0
53dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
54gb|AF280107.1|AF280107 Homo sapiens cytochrome P450 polypeptide ... 40 7.0
55gb|DQ005611.1| Homo sapiens cytochrome P450, family 3, subfamily... 40 7.0
56gb|AF151172.1|AF151172 Ornithorhynchus anatinus mannose 6-phosph... 40 7.0
57dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
58emb|AL772135.14| Mouse DNA sequence from clone RP23-162G11 on ch... 40 7.0 
>ref|XM_479265.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1205

 Score =  180 bits (91), Expect = 3e-42
 Identities = 145/163 (88%)
 Strand = Plus / Minus

                                                                       
Query: 356 gcaggaggtgccagtcccgggatgtctggtatgcttttgttatgcgggttgacgatcttg 415
           ||||| ||||||||||| |||||||||   ||| | ||||| || |||||||| ||||| 
Sbjct: 880 gcaggtggtgccagtcctgggatgtctctgatgttcttgttgtgagggttgacaatctta 821

                                                                       
Query: 416 acaacaatgatggcaatcacaccacaaactatcaagaatagaaatgccatgatgcatttg 475
           ||||||||||| |||||||||||||| |||||||  ||||| ||||||||||||||||||
Sbjct: 820 acaacaatgattgcaatcacaccacagactatcagaaataggaatgccatgatgcatttg 761

                                                      
Query: 476 tcagttgcaacctgacgaccaatctctttcaccatttgactag 518
           |||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 760 tcagttgcaacctggcgaccaatctctttcaccatttggctag 718
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>gb|AY740016.1| Oryza sativa (japonica cultivar-group) SNARE 13 (NPSN13) mRNA,
           complete cds
          Length = 921

 Score =  180 bits (91), Expect = 3e-42
 Identities = 145/163 (88%)
 Strand = Plus / Minus

                                                                       
Query: 356 gcaggaggtgccagtcccgggatgtctggtatgcttttgttatgcgggttgacgatcttg 415
           ||||| ||||||||||| |||||||||   ||| | ||||| || |||||||| ||||| 
Sbjct: 860 gcaggtggtgccagtcctgggatgtctctgatgttcttgttgtgagggttgacaatctta 801

                                                                       
Query: 416 acaacaatgatggcaatcacaccacaaactatcaagaatagaaatgccatgatgcatttg 475
           ||||||||||| |||||||||||||| |||||||  ||||| ||||||||||||||||||
Sbjct: 800 acaacaatgattgcaatcacaccacagactatcagaaataggaatgccatgatgcatttg 741

                                                      
Query: 476 tcagttgcaacctgacgaccaatctctttcaccatttgactag 518
           |||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 740 tcagttgcaacctggcgaccaatctctttcaccatttggctag 698
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>dbj|AK067595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108F08, full
           insert sequence
          Length = 1205

 Score =  180 bits (91), Expect = 3e-42
 Identities = 145/163 (88%)
 Strand = Plus / Minus

                                                                       
Query: 356 gcaggaggtgccagtcccgggatgtctggtatgcttttgttatgcgggttgacgatcttg 415
           ||||| ||||||||||| |||||||||   ||| | ||||| || |||||||| ||||| 
Sbjct: 880 gcaggtggtgccagtcctgggatgtctctgatgttcttgttgtgagggttgacaatctta 821

                                                                       
Query: 416 acaacaatgatggcaatcacaccacaaactatcaagaatagaaatgccatgatgcatttg 475
           ||||||||||| |||||||||||||| |||||||  ||||| ||||||||||||||||||
Sbjct: 820 acaacaatgattgcaatcacaccacagactatcagaaataggaatgccatgatgcatttg 761

                                                      
Query: 476 tcagttgcaacctgacgaccaatctctttcaccatttgactag 518
           |||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 760 tcagttgcaacctggcgaccaatctctttcaccatttggctag 718
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>ref|NM_184930.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1213

 Score =  139 bits (70), Expect = 1e-29
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                       
Query: 392 ttgttatgcgggttgacgatcttgacaacaatgatggcaatcacaccacaaactatcaag 451
           |||||||| |||||||| ||||| |||||||| || ||||||||||||||||| ||||  
Sbjct: 885 ttgttatgtgggttgacaatcttaacaacaataattgcaatcacaccacaaacaatcaga 826

                                                                     
Query: 452 aatagaaatgccatgatgcatttgtcagttgcaacctgacgaccaatctctttcacca 509
           || || |||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 825 aaaagcaatgccataatgcatttgtcagttgcaacctgacggccaatctctttcacca 768
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>gb|AY740015.1| Oryza sativa (japonica cultivar-group) SNARE 12 (NPSN12) mRNA,
           complete cds
          Length = 986

 Score =  139 bits (70), Expect = 1e-29
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                       
Query: 392 ttgttatgcgggttgacgatcttgacaacaatgatggcaatcacaccacaaactatcaag 451
           |||||||| |||||||| ||||| |||||||| || ||||||||||||||||| ||||  
Sbjct: 807 ttgttatgtgggttgacaatcttaacaacaataattgcaatcacaccacaaacaatcaga 748

                                                                     
Query: 452 aatagaaatgccatgatgcatttgtcagttgcaacctgacgaccaatctctttcacca 509
           || || |||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 747 aaaagcaatgccataatgcatttgtcagttgcaacctgacggccaatctctttcacca 690
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>dbj|AK064875.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J14, full
           insert sequence
          Length = 1248

 Score =  139 bits (70), Expect = 1e-29
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                       
Query: 392 ttgttatgcgggttgacgatcttgacaacaatgatggcaatcacaccacaaactatcaag 451
           |||||||| |||||||| ||||| |||||||| || ||||||||||||||||| ||||  
Sbjct: 920 ttgttatgtgggttgacaatcttaacaacaataattgcaatcacaccacaaacaatcaga 861

                                                                     
Query: 452 aatagaaatgccatgatgcatttgtcagttgcaacctgacgaccaatctctttcacca 509
           || || |||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 860 aaaagcaatgccataatgcatttgtcagttgcaacctgacggccaatctctttcacca 803
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>gb|AY108420.1| Zea mays PCO101160 mRNA sequence
          Length = 1125

 Score =  135 bits (68), Expect = 2e-28
 Identities = 137/160 (85%)
 Strand = Plus / Minus

                                                                       
Query: 359 ggaggtgccagtcccgggatgtctggtatgcttttgttatgcgggttgacgatcttgaca 418
           |||||||| || ||||| ||||||   ||| | ||||||||||||||||| ||||| |||
Sbjct: 914 ggaggtgctaggcccggaatgtctctgatgttcttgttatgcgggttgacaatcttaaca 855

                                                                       
Query: 419 acaatgatggcaatcacaccacaaactatcaagaatagaaatgccatgatgcatttgtca 478
           ||||| || ||||| |||||||| || ||||  || || || ||||| ||||||||||||
Sbjct: 854 acaattattgcaatgacaccacagacaatcagaaacaggaacgccataatgcatttgtca 795

                                                   
Query: 479 gttgcaacctgacgaccaatctctttcaccatttgactag 518
           || ||||||||||| |||||||||||||||||||||||||
Sbjct: 794 gtagcaacctgacggccaatctctttcaccatttgactag 755
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>gb|AY108575.1| Zea mays PCO097136 mRNA sequence
          Length = 948

 Score =  111 bits (56), Expect = 2e-21
 Identities = 128/152 (84%)
 Strand = Plus / Minus

                                                                       
Query: 356 gcaggaggtgccagtcccgggatgtctggtatgcttttgttatgcgggttgacgatcttg 415
           ||||| || ||||| || || |||||| | ||| ||||||||| ||| | ||||||||| 
Sbjct: 557 gcaggcggggccagccctggaatgtctcgaatgtttttgttattcggatggacgatctta 498

                                                                       
Query: 416 acaacaatgatggcaatcacaccacaaactatcaagaatagaaatgccatgatgcatttg 475
           ||||||||||| |||||||||||  |||| ||||  || || ||||||||||| ||||||
Sbjct: 497 acaacaatgatagcaatcacacccaaaacgatcagaaagaggaatgccatgatacatttg 438

                                           
Query: 476 tcagttgcaacctgacgaccaatctctttcac 507
           ||||| |||||||| ||||||||||| |||||
Sbjct: 437 tcagtcgcaacctggcgaccaatctccttcac 406
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  107 bits (54), Expect = 4e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                            
Query: 416      acaacaatgatggcaatcacaccacaaactatcaagaatagaaatgccatgatgcatttg 475
                ||||||||||| |||||||||||||| |||||||  ||||| ||||||||||||||||||
Sbjct: 26449836 acaacaatgattgcaatcacaccacagactatcagaaataggaatgccatgatgcatttg 26449777

                              
Query: 476      tcagttgcaacctg 489
                ||||||||||||||
Sbjct: 26449776 tcagttgcaacctg 26449763



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 484      aacctgacgaccaatctctttcaccatttgactag 518
                |||||| ||||||||||||||||||||||| ||||
Sbjct: 26449600 aacctggcgaccaatctctttcaccatttggctag 26449566
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>dbj|AP003749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1136_D11
          Length = 109399

 Score =  107 bits (54), Expect = 4e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                          
Query: 416    acaacaatgatggcaatcacaccacaaactatcaagaatagaaatgccatgatgcatttg 475
              ||||||||||| |||||||||||||| |||||||  ||||| ||||||||||||||||||
Sbjct: 104076 acaacaatgattgcaatcacaccacagactatcagaaataggaatgccatgatgcatttg 104017

                            
Query: 476    tcagttgcaacctg 489
              ||||||||||||||
Sbjct: 104016 tcagttgcaacctg 104003



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 484    aacctgacgaccaatctctttcaccatttgactag 518
              |||||| ||||||||||||||||||||||| ||||
Sbjct: 103840 aacctggcgaccaatctctttcaccatttggctag 103806
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 416      acaacaatgatggcaatcacaccacaaactatcaagaatagaaatgccatgatgcatttg 475
                |||||||| || ||||||||||||||||| ||||  || || |||||||| |||||||||
Sbjct: 14353156 acaacaataattgcaatcacaccacaaacaatcagaaaaagcaatgccataatgcatttg 14353215

                              
Query: 476      tcagttgcaacctg 489
                ||||||||||||||
Sbjct: 14353216 tcagttgcaacctg 14353229



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 485      acctgacgaccaatctctttcacca 509
                |||||||| ||||||||||||||||
Sbjct: 14353308 acctgacggccaatctctttcacca 14353332
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>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
              sequence
          Length = 158714

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                          
Query: 416    acaacaatgatggcaatcacaccacaaactatcaagaatagaaatgccatgatgcatttg 475
              |||||||| || ||||||||||||||||| ||||  || || |||||||| |||||||||
Sbjct: 102385 acaacaataattgcaatcacaccacaaacaatcagaaaaagcaatgccataatgcatttg 102444

                            
Query: 476    tcagttgcaacctg 489
              ||||||||||||||
Sbjct: 102445 tcagttgcaacctg 102458



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 485    acctgacgaccaatctctttcacca 509
              |||||||| ||||||||||||||||
Sbjct: 102537 acctgacggccaatctctttcacca 102561
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 416      acaacaatgatggcaatcacaccacaaactatcaagaatagaaatgccatgatgcatttg 475
                |||||||| || ||||||||||||||||| ||||  || || |||||||| |||||||||
Sbjct: 14348131 acaacaataattgcaatcacaccacaaacaatcagaaaaagcaatgccataatgcatttg 14348190

                              
Query: 476      tcagttgcaacctg 489
                ||||||||||||||
Sbjct: 14348191 tcagttgcaacctg 14348204



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 485      acctgacgaccaatctctttcacca 509
                |||||||| ||||||||||||||||
Sbjct: 14348283 acctgacggccaatctctttcacca 14348307
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>gb|AY740014.1| Oryza sativa (japonica cultivar-group) SNARE 11 (NPSN11) mRNA,
           complete cds
          Length = 880

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 476 tcagttgcaacctgacgaccaatctctttcaccatttg 513
           |||||||||||||| | |||||| ||||||||||||||
Sbjct: 689 tcagttgcaacctgcctaccaatttctttcaccatttg 652
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>dbj|AK058743.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-G10, full
           insert sequence
          Length = 1308

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 476 tcagttgcaacctgacgaccaatctctttcaccatttg 513
           |||||||||||||| | |||||| ||||||||||||||
Sbjct: 897 tcagttgcaacctgcctaccaatttctttcaccatttg 860
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>gb|AY105466.1| Zea mays PCO148690 mRNA sequence
          Length = 937

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 461 gccatgatgcatttgtcagttgcaacctgacgaccaatctctttcaccatttga 514
           ||||||||||||   |||||||||||||| ||||| || |||||||||| ||||
Sbjct: 451 gccatgatgcatcgatcagttgcaacctgtcgaccgatttctttcaccaattga 398
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>ref|NM_129072.3| Arabidopsis thaliana NPSN11 (NOVEL PLANT SNARE 11); protein
            transporter AT2G35190 (NPSN11) mRNA, complete cds
          Length = 1599

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 455  agaaatgccatgatgcatttgtcagttgcaacctgacgaccaat 498
            ||||||||||| || ||||||||||| |||||||| | ||||||
Sbjct: 1120 agaaatgccataatacatttgtcagtggcaacctgcctaccaat 1077
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>gb|AY143839.1| Arabidopsis thaliana At2g35190/T4C15.14 mRNA, complete cds
          Length = 798

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 455 agaaatgccatgatgcatttgtcagttgcaacctgacgaccaat 498
           ||||||||||| || ||||||||||| |||||||| | ||||||
Sbjct: 659 agaaatgccataatacatttgtcagtggcaacctgcctaccaat 616
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>gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map ve016, complete
             sequence
          Length = 91863

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 455   agaaatgccatgatgcatttgtcagttgcaacctga 490
             ||||||||||| || ||||||||||| |||||||||
Sbjct: 37055 agaaatgccataatacatttgtcagtggcaacctga 37090
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>gb|AF439822.1|AF439822 Arabidopsis thaliana At2g35190/T4C15.14 mRNA, complete cds
          Length = 1534

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 455  agaaatgccatgatgcatttgtcagttgcaacctgacgaccaat 498
            ||||||||||| || ||||||||||| |||||||| | ||||||
Sbjct: 1058 agaaatgccataatacatttgtcagtggcaacctgcctaccaat 1015
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>emb|BX820006.1|CNS0A8FE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS5ZF08 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1482

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 455  agaaatgccatgatgcatttgtcagttgcaacctgacgaccaat 498
            ||||||||||| || ||||||||||| |||||||| | ||||||
Sbjct: 1033 agaaatgccataatacatttgtcagtggcaacctgcctaccaat 990
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>emb|BX819205.1|CNS0A7Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB57ZA11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1466

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 455  agaaatgccatgatgcatttgtcagttgcaacctgacgaccaat 498
            ||||||||||| || ||||||||||| |||||||| | ||||||
Sbjct: 1029 agaaatgccataatacatttgtcagtggcaacctgcctaccaat 986
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>gb|AY112317.1| Zea mays CL2771_1 mRNA sequence
          Length = 601

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 495 caatctctttcaccatttgact 516
           ||||||||||||||||||||||
Sbjct: 557 caatctctttcaccatttgact 536
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>gb|AC104203.11| Mus musculus chromosome 5, clone RP24-301M6, complete sequence
          Length = 174779

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 179    caatcaaagaaaattacatac 199
              |||||||||||||||||||||
Sbjct: 105602 caatcaaagaaaattacatac 105582
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>emb|AL138897.10| Human DNA sequence from clone RP11-231D11 on chromosome 10, complete
             sequence
          Length = 59779

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 296   aatgttcagagcattcggaaa 316
             |||||||||||||||||||||
Sbjct: 19034 aatgttcagagcattcggaaa 19054
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>gb|AC149039.2| Medicago truncatula chromosome 7 BAC clone mth2-4g23, complete sequence
          Length = 103199

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 404   ttgacgatcttgacaacaatgatg 427
             ||||| ||||||||||||||||||
Sbjct: 26267 ttgacaatcttgacaacaatgatg 26244
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
               sequence
          Length = 1347793

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 347     gcaggaggtgcaggaggtgc 366
               ||||||||||||||||||||
Sbjct: 1016372 gcaggaggtgcaggaggtgc 1016353
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>gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, complete sequence
          Length = 203574

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     ggacaacattcacatgctca 23
             ||||||||||||||||||||
Sbjct: 26829 ggacaacattcacatgctca 26810
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>ref|NG_000004.2| Homo sapiens cytochrome P450, family 3, subfamily A (CYP3A) on chromosome
              7
          Length = 428605

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    taaaagcaatcaaagaaaat 192
              ||||||||||||||||||||
Sbjct: 161623 taaaagcaatcaaagaaaat 161604
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>gb|AC146392.5| Pan troglodytes BAC clone RP43-57L13 from 7, complete sequence
          Length = 170470

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    taaaagcaatcaaagaaaat 192
              ||||||||||||||||||||
Sbjct: 149523 taaaagcaatcaaagaaaat 149504
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 347     gcaggaggtgcaggaggtgc 366
               ||||||||||||||||||||
Sbjct: 1385475 gcaggaggtgcaggaggtgc 1385456
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>ref|XM_451805.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B06039g predicted mRNA
          Length = 1770

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 347  gcaggaggtgcaggaggtgc 366
            ||||||||||||||||||||
Sbjct: 1148 gcaggaggtgcaggaggtgc 1129
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 283     acttccatttccgaatgttc 302
               ||||||||||||||||||||
Sbjct: 2219985 acttccatttccgaatgttc 2220004
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>emb|CR717340.2|CNS0GGG2 Tetraodon nigroviridis full-length cDNA
          Length = 655

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 233 gttgacatcgtgtgttttgg 252
           ||||||||||||||||||||
Sbjct: 649 gttgacatcgtgtgttttgg 630
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>emb|CR711472.2|CNS0GBX8 Tetraodon nigroviridis full-length cDNA
          Length = 656

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 233 gttgacatcgtgtgttttgg 252
           ||||||||||||||||||||
Sbjct: 649 gttgacatcgtgtgttttgg 630
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>emb|CR705472.2|CNS0G7AK Tetraodon nigroviridis full-length cDNA
          Length = 656

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 233 gttgacatcgtgtgttttgg 252
           ||||||||||||||||||||
Sbjct: 649 gttgacatcgtgtgttttgg 630
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>gb|AC073387.4| Homo sapiens BAC clone RP11-10E6 from 7, complete sequence
          Length = 153300

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    atgtacaagcaagcaccaat 226
              ||||||||||||||||||||
Sbjct: 148730 atgtacaagcaagcaccaat 148711
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>gb|AC146586.2| Medicago truncatula clone mth2-71m12, complete sequence
          Length = 109629

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 169 aagctaaaagcaatcaaagaaaattaca 196
           ||||||| ||||| ||||||||||||||
Sbjct: 448 aagctaacagcaaacaaagaaaattaca 421
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>gb|AC160107.2| Mus musculus BAC clone RP24-252N17 from chromosome 13, complete sequence
          Length = 178725

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      ggacaacattcacatgctca 23
              ||||||||||||||||||||
Sbjct: 149086 ggacaacattcacatgctca 149067
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>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1320834

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    gcaggaggtgcaggaggtgc 366
              ||||||||||||||||||||
Sbjct: 539686 gcaggaggtgcaggaggtgc 539667
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>gb|AC146862.24| Medicago truncatula clone mth2-174p12, complete sequence
          Length = 114731

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 59/72 (81%)
 Strand = Plus / Plus

                                                                       
Query: 419 acaatgatggcaatcacaccacaaactatcaagaatagaaatgccatgatgcatttgtca 478
           ||||| ||||||||||||||||| || || |  || |||||   ||||||||| ||||| 
Sbjct: 287 acaataatggcaatcacaccacagacgataagaaacagaaaaagcatgatgcacttgtct 346

                       
Query: 479 gttgcaacctga 490
           || |||||||||
Sbjct: 347 gtagcaacctga 358
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>gb|AC162161.9| Medicago truncatula clone mth2-2g22, complete sequence
          Length = 109841

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 169   aagctaaaagcaatcaaagaaaattaca 196
             ||||||| ||||| ||||||||||||||
Sbjct: 23031 aagctaacagcaaacaaagaaaattaca 23058
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>gb|AC174352.7| Medicago truncatula clone mth2-7o1, complete sequence
          Length = 121626

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 419   acaatgatggcaatcacaccacaaactatcaagaatagaaatgccatgatgcatttgtca 478
             ||||| ||||||||||||||||| || || |  || |||||   ||||||||| ||||| 
Sbjct: 48241 acaataatggcaatcacaccacagacgataagaaacagaaaaagcatgatgcacttgtct 48182

                         
Query: 479   gttgcaacctga 490
             || |||||||||
Sbjct: 48181 gtagcaacctga 48170
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>gb|AC090858.6| Homo sapiens chromosome 11, clone RP11-676E14, complete sequence
          Length = 168906

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 493    accaatctctttcaccattt 512
              ||||||||||||||||||||
Sbjct: 158734 accaatctctttcaccattt 158753
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>gb|AC108460.5| Homo sapiens chromosome 11, clone CTD-2302A16, complete sequence
          Length = 149148

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 493  accaatctctttcaccattt 512
            ||||||||||||||||||||
Sbjct: 3074 accaatctctttcaccattt 3093
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>gb|AC021436.8| Homo sapiens chromosome , clone RP11-121C18, complete sequence
          Length = 180765

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 493   accaatctctttcaccattt 512
             ||||||||||||||||||||
Sbjct: 63473 accaatctctttcaccattt 63492
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>emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, complete sequence
          Length = 135717

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 216   caagcaccaatggaacagttgaca 239
             |||||||||||||||| |||||||
Sbjct: 27949 caagcaccaatggaactgttgaca 27926
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>emb|BX294186.9| Zebrafish DNA sequence from clone DKEY-170O10 in linkage group 5,
              complete sequence
          Length = 143396

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    gaccaatctctttcaccatt 511
              ||||||||||||||||||||
Sbjct: 102696 gaccaatctctttcaccatt 102715
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>ref|XM_572068.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 5937

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 347  gcaggaggtgcaggaggtgc 366
            ||||||||||||||||||||
Sbjct: 2540 gcaggaggtgcaggaggtgc 2521
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>dbj|AK040611.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430109D20 product:myeloid ecotropic
           viral integration site-related gene 1, full insert
           sequence
          Length = 5501

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 caagaaggccaggcaattta 134
           ||||||||||||||||||||
Sbjct: 487 caagaaggccaggcaattta 468
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>gb|AF209389.1|AF209389 Homo sapiens cytochrome P450 IIIA4 (CYP3A4) gene, exons 1 through 13
             and complete cds
          Length = 26502

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   taaaagcaatcaaagaaaat 192
             ||||||||||||||||||||
Sbjct: 12743 taaaagcaatcaaagaaaat 12724
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>gb|AC069294.5|AC069294 Homo sapiens BAC clone RP11-757A13 from 7, complete sequence
          Length = 123778

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   taaaagcaatcaaagaaaat 192
             ||||||||||||||||||||
Sbjct: 47939 taaaagcaatcaaagaaaat 47920
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 204      ataatgtacaagcaagcaccaatg 227
                ||||||||| ||||||||||||||
Sbjct: 13219893 ataatgtactagcaagcaccaatg 13219916
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>gb|AF280107.1|AF280107 Homo sapiens cytochrome P450 polypeptide 43 (CYP3A43) gene, partial
             cds; cytochrome P450 polypeptide 4 (CYP3A4) and cytochrome
             P450 polypeptide 7 (CYP3A7) genes, complete cds; and
             cytochrome P450 polypeptide 5 (CYP3A5) gene, partial cds
          Length = 174832

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   taaaagcaatcaaagaaaat 192
             ||||||||||||||||||||
Sbjct: 74661 taaaagcaatcaaagaaaat 74642
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>gb|DQ005611.1| Homo sapiens cytochrome P450, family 3, subfamily A, polypeptide 4
             (CYP3A4) gene, complete cds
          Length = 30035

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   taaaagcaatcaaagaaaat 192
             ||||||||||||||||||||
Sbjct: 14660 taaaagcaatcaaagaaaat 14641
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>gb|AF151172.1|AF151172 Ornithorhynchus anatinus mannose 6-phosphate/insulin-like growth
           factor 2 receptor (M6p/Igf2r) mRNA, complete cds
          Length = 9024

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 347 gcaggaggtgcaggaggtgc 366
           ||||||||||||||||||||
Sbjct: 95  gcaggaggtgcaggaggtgc 114
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>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0055N01
          Length = 154783

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 204   ataatgtacaagcaagcaccaatg 227
             ||||||||| ||||||||||||||
Sbjct: 41327 ataatgtactagcaagcaccaatg 41350
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>emb|AL772135.14| Mouse DNA sequence from clone RP23-162G11 on chromosome 2, complete
              sequence
          Length = 230161

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    caagaaggccaggcaattta 134
              ||||||||||||||||||||
Sbjct: 166303 caagaaggccaggcaattta 166322


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,247,998
Number of Sequences: 3902068
Number of extensions: 4247998
Number of successful extensions: 92873
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 92626
Number of HSP's gapped (non-prelim): 249
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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