ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TAB3_XENLA (Q7ZXH3) Mitogen-activated protein kinase kinase kina... 30 3.0
2SWAP_CAEEL (Q10580) Protein SWAP (Suppressor of white apricot pr... 29 6.6
3MURG_MYCTU (O06224) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe... 29 8.6
4MURG_MYCBO (Q7VEP8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe... 29 8.6
5E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ET... 29 8.6
6E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ET... 29 8.6

>TAB3_XENLA (Q7ZXH3) Mitogen-activated protein kinase kinase kinase|
           7-interacting protein 3 homolog
          Length = 692

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 221 RLPFDVLRSPPTSVGSSPFDLPRHRI 298
           ++P    RSPPTS  +SP+  P+H++
Sbjct: 262 QIPQSAFRSPPTSQCTSPYSSPQHQV 287



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>SWAP_CAEEL (Q10580) Protein SWAP (Suppressor of white apricot protein homolog)|
          Length = 749

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 41  ANEIFSLHNQTRRWAERRHRLPCPGDAAQRV 133
           A+ IF    Q+   AE RH +PC GD   RV
Sbjct: 24  ASTIFPNDYQSEHIAEERHTVPCLGDPENRV 54



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>MURG_MYCTU (O06224) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 410

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 281 LPRHRICGGLPLPPRARQRVRLV 349
           LP +    GLPLPPR R+R+ +V
Sbjct: 140 LPAYLAARGLPLPPRRRRRIPVV 162



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>MURG_MYCBO (Q7VEP8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 410

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 281 LPRHRICGGLPLPPRARQRVRLV 349
           LP +    GLPLPPR R+R+ +V
Sbjct: 140 LPAYLAARGLPLPPRRRRRIPVV 162



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>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related|
           protein E74B)
          Length = 883

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 149 HPQLHPRAAPHRRGTVAGAAARPIVS 72
           HP  HP A  H   T+A AAA    S
Sbjct: 679 HPHSHPHAGQHTHSTIAAAAAAAAAS 704



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>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related|
           protein E74A)
          Length = 829

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 149 HPQLHPRAAPHRRGTVAGAAARPIVS 72
           HP  HP A  H   T+A AAA    S
Sbjct: 625 HPHSHPHAGQHTHSTIAAAAAAAAAS 650


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,542,579
Number of Sequences: 219361
Number of extensions: 831911
Number of successful extensions: 3452
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3452
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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