ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
2gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
6emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa... 52 0.002
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
8dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
9ref|XM_483413.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
10gb|AC140189.3| Mus musculus BAC clone RP24-370G18 from chromosom... 44 0.42
11emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 44 0.42
12dbj|AK139130.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 44 0.42
13gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Can... 44 0.42
14ref|NM_007737.2| Mus musculus procollagen, type V, alpha 2 (Col5... 44 0.42
15ref|XM_308314.2| Anopheles gambiae str. PEST ENSANGP00000009384 ... 44 0.42
16gb|L11647.1|STMGLGEN Streptomyces aureofaciens glycogen branchin... 44 0.42
17emb|AJ245406.1|DME245406 Drosophila melanogaster partial kettin ... 42 1.7
18emb|AJ271740.1|DME271740 Drosophila melanogaster D-Titin gene, e... 42 1.7
19gb|AC010034.7| Drosophila melanogaster 3L BAC RP98-4A21 (Roswell... 42 1.7
20gb|AC091222.3| Drosophila melanogaster 3L BAC RP98-11G24 (Roswel... 42 1.7
21ref|NM_144448.2| Drosophila melanogaster sallimus CG1915-RC, tra... 42 1.7
22ref|NM_079937.2| Drosophila melanogaster sallimus CG1915-RA, tra... 42 1.7
23dbj|AK135392.1| Mus musculus 12 days embryo female mullerian duc... 42 1.7
24gb|AC104083.3| Homo sapiens BAC clone RP11-588K22 from 4, comple... 42 1.7
25gb|AC155930.3| Mus musculus BAC clone RP23-412K9 from chromosome... 42 1.7
26tpg|BK000146.1| TPA: TPA_exp: Drosophila melanogaster TITIN mRNA... 42 1.7
27dbj|AP003387.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.7
28gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 ... 42 1.7
29dbj|AP003384.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.7
30dbj|AB026845.2| Drosophila melanogaster mRNA for kettin, complet... 42 1.7
31gb|AY350740.1| Bubalus bubalis solute carrier family 26 member 2... 40 6.5
32ref|XM_360203.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.5
33gb|AC129188.3| Mus musculus BAC clone RP23-446G23 from chromosom... 40 6.5
34ref|XM_845107.1| PREDICTED: Canis familiaris similar to retinal ... 40 6.5
35emb|AL024509.1|HS522P13 Human DNA sequence from clone RP3-522P13... 40 6.5
36emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 40 6.5
37emb|BX927204.6| Zebrafish DNA sequence from clone CH211-103B12 i... 40 6.5
38gb|AC109133.2| Homo sapiens chromosome 5 clone RP11-109B6, compl... 40 6.5
39dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.5
40gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, co... 40 6.5
41gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.5
42emb|BX322549.5| Zebrafish DNA sequence from clone DKEYP-9D12 in ... 40 6.5
43gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.5
44gb|AC016591.6|AC016591 Homo sapiens chromosome 5 clone CTD-2003D... 40 6.5
45gb|AC008214.4|AC008214 Drosophila melanogaster, chromosome 3R, r... 40 6.5
46emb|CR356233.12| Zebrafish DNA sequence from clone CH211-262N1, ... 40 6.5
47gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94... 40 6.5 
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0019D02, complete sequence
          Length = 154692

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                          
Query: 352    ccggcgagcacgagcttgcccttggcatccaggttctcctgcgcgaacgcgtgcttggcc 411
              |||||||||  |||| |||||||||| |||||||||||||||||||||||||||||   |
Sbjct: 150558 ccggcgagcgagagcctgcccttggcgtccaggttctcctgcgcgaacgcgtgcttcatc 150499

                                                                      
Query: 412    ggcaccccgttggccaccgcggaccccacctgccagatgtggttcacggactccat 467
              ||||| |||  ||  |||| ||| || |||||||||||||||||||| | ||||||
Sbjct: 150498 ggcacgccgccggtgaccgtggagccgacctgccagatgtggttcaccgtctccat 150443
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>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBb0004A05, complete sequence
          Length = 157913

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                         
Query: 352   ccggcgagcacgagcttgcccttggcatccaggttctcctgcgcgaacgcgtgcttggcc 411
             |||||||||  |||| |||||||||| |||||||||||||||||||||||||||||   |
Sbjct: 35232 ccggcgagcgagagcctgcccttggcgtccaggttctcctgcgcgaacgcgtgcttcatc 35173

                                                                     
Query: 412   ggcaccccgttggccaccgcggaccccacctgccagatgtggttcacggactccat 467
             ||||| |||  ||  |||| ||| || |||||||||||||||||||| | ||||||
Sbjct: 35172 ggcacgccgccggtgaccgtggagccgacctgccagatgtggttcaccgtctccat 35117
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 99/116 (85%)
 Strand = Plus / Minus

                                                                            
Query: 352      ccggcgagcacgagcttgcccttggcatccaggttctcctgcgcgaacgcgtgcttggcc 411
                |||||||||  |||| |||||||||| |||||||||||||||||||||||||||||   |
Sbjct: 19105273 ccggcgagcgagagcctgcccttggcgtccaggttctcctgcgcgaacgcgtgcttcatc 19105214

                                                                        
Query: 412      ggcaccccgttggccaccgcggaccccacctgccagatgtggttcacggactccat 467
                ||||| |||  ||  |||| ||| || |||||||||||||||||||| | ||||||
Sbjct: 19105213 ggcacgccgccggtgaccgtggagccgacctgccagatgtggttcaccgtctccat 19105158
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                          
Query: 427      accgcggaccccacctgccagatgtggttcacggactccatgcccttgggcagctgca 484
                |||| |||||| |||||||||||||||||||| | |||||| || |  ||||||||||
Sbjct: 15360493 accgtggacccgacctgccagatgtggttcaccgtctccatcccgtgaggcagctgca 15360550
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                          
Query: 427      accgcggaccccacctgccagatgtggttcacggactccatgcccttgggcagctgca 484
                |||| |||||| |||||||||||||||||||| | |||||| || |  ||||||||||
Sbjct: 15314776 accgtggacccgacctgccagatgtggttcaccgtctccatcccgtgaggcagctgca 15314833
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>emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa0036B12 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 151541

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                        
Query: 427    accgcggaccccacctgccagatgtggttcacggactccatgcccttgggcagctgca 484
              |||| |||||| |||||||||||||||||||| | |||||| || |  ||||||||||
Sbjct: 135886 accgtggacccgacctgccagatgtggttcaccgtctccatcccgtgaggcagctgca 135943
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 146      atcatacaatcgccaagaaaccaaccaa 173
                |||||||||||||||||||||| |||||
Sbjct: 26080182 atcatacaatcgccaagaaacccaccaa 26080155
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>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1191_A10
          Length = 140643

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 146   atcatacaatcgccaagaaaccaaccaa 173
             |||||||||||||||||||||| |||||
Sbjct: 24113 atcatacaatcgccaagaaacccaccaa 24086
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>ref|XM_483413.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 792

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 147 tcatacaatcgccaagaaaccaaccaa 173
           ||||||||||||||||||||| |||||
Sbjct: 792 tcatacaatcgccaagaaacccaccaa 766
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>gb|AC140189.3| Mus musculus BAC clone RP24-370G18 from chromosome 1, complete sequence
          Length = 182590

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 36     aaaaataaacaagaacaggaaa 57
              ||||||||||||||||||||||
Sbjct: 132938 aaaaataaacaagaacaggaaa 132917
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>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 253   gacggcgtgggcgacgacggcg 274
             ||||||||||||||||||||||
Sbjct: 67018 gacggcgtgggcgacgacggcg 67039
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>dbj|AK139130.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730041E01 product:procollagen,
            type V, alpha 2, full insert sequence
          Length = 5901

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 36   aaaaataaacaagaacaggaaa 57
            ||||||||||||||||||||||
Sbjct: 5462 aaaaataaacaagaacaggaaa 5441
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>gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 202745

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 36     aaaaataaacaagaacaggaaagata 61
              ||||||||||||||| ||||||||||
Sbjct: 102862 aaaaataaacaagaataggaaagata 102837
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>ref|NM_007737.2| Mus musculus procollagen, type V, alpha 2 (Col5a2), mRNA
          Length = 6615

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 36   aaaaataaacaagaacaggaaa 57
            ||||||||||||||||||||||
Sbjct: 5887 aaaaataaacaagaacaggaaa 5866
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>ref|XM_308314.2| Anopheles gambiae str. PEST ENSANGP00000009384 (ENSANGG00000007024),
             partial mRNA
          Length = 17172

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 462   ctccatgcccttgggcagctgc 483
             ||||||||||||||||||||||
Sbjct: 10332 ctccatgcccttgggcagctgc 10311
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>gb|L11647.1|STMGLGEN Streptomyces aureofaciens glycogen branching enzyme (glgB) gene,
            complete cds
          Length = 2557

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 211  gtggtggacgccgctcccgccg 232
            ||||||||||||||||||||||
Sbjct: 2298 gtggtggacgccgctcccgccg 2277
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>emb|AJ245406.1|DME245406 Drosophila melanogaster partial kettin gene
          Length = 37107

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 462   ctccatgcccttgggcagctg 482
             |||||||||||||||||||||
Sbjct: 14655 ctccatgcccttgggcagctg 14635
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>emb|AJ271740.1|DME271740 Drosophila melanogaster D-Titin gene, exons 1-37
          Length = 70398

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 462   ctccatgcccttgggcagctg 482
             |||||||||||||||||||||
Sbjct: 16410 ctccatgcccttgggcagctg 16390
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>gb|AC010034.7| Drosophila melanogaster 3L BAC RP98-4A21 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 154234

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 462  ctccatgcccttgggcagctg 482
            |||||||||||||||||||||
Sbjct: 2338 ctccatgcccttgggcagctg 2358
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>gb|AC091222.3| Drosophila melanogaster 3L BAC RP98-11G24 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 144056

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 462   ctccatgcccttgggcagctg 482
             |||||||||||||||||||||
Sbjct: 76314 ctccatgcccttgggcagctg 76334
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>ref|NM_144448.2| Drosophila melanogaster sallimus CG1915-RC, transcript variant C (sls),
             mRNA
          Length = 54815

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 462   ctccatgcccttgggcagctg 482
             |||||||||||||||||||||
Sbjct: 10917 ctccatgcccttgggcagctg 10897
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>ref|NM_079937.2| Drosophila melanogaster sallimus CG1915-RA, transcript variant A (sls),
             mRNA
          Length = 15272

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 462   ctccatgcccttgggcagctg 482
             |||||||||||||||||||||
Sbjct: 10917 ctccatgcccttgggcagctg 10897
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>dbj|AK135392.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820413G24 product:unclassifiable, full
            insert sequence
          Length = 3531

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 40   ataaacaagaacaggaaagatatat 64
            |||||||||||||||||||| ||||
Sbjct: 2243 ataaacaagaacaggaaagaaatat 2219
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>gb|AC104083.3| Homo sapiens BAC clone RP11-588K22 from 4, complete sequence
          Length = 196537

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 331    gcggcctccggcgcgccggca 351
              |||||||||||||||||||||
Sbjct: 111982 gcggcctccggcgcgccggca 112002
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>gb|AC155930.3| Mus musculus BAC clone RP23-412K9 from chromosome 7, complete sequence
          Length = 187418

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 40    ataaacaagaacaggaaagatatat 64
             |||||||||||||||||||| ||||
Sbjct: 75106 ataaacaagaacaggaaagaaatat 75130
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>tpg|BK000146.1| TPA: TPA_exp: Drosophila melanogaster TITIN mRNA, complete cds
          Length = 53712

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 462   ctccatgcccttgggcagctg 482
             |||||||||||||||||||||
Sbjct: 15438 ctccatgcccttgggcagctg 15418
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>dbj|AP003387.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-700F9, complete
             sequence
          Length = 185017

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 26    caacccagacaaaaataaacaagaa 50
             ||||||||||||||||||| |||||
Sbjct: 48285 caacccagacaaaaataaaaaagaa 48261
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>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete
              sequence
          Length = 315108

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 462    ctccatgcccttgggcagctg 482
              |||||||||||||||||||||
Sbjct: 258277 ctccatgcccttgggcagctg 258297
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>dbj|AP003384.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-35N19, complete
              sequence
          Length = 156712

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 26     caacccagacaaaaataaacaagaa 50
              ||||||||||||||||||| |||||
Sbjct: 128405 caacccagacaaaaataaaaaagaa 128381
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>dbj|AB026845.2| Drosophila melanogaster mRNA for kettin, complete cds
          Length = 15244

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 462   ctccatgcccttgggcagctg 482
             |||||||||||||||||||||
Sbjct: 10889 ctccatgcccttgggcagctg 10869
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>gb|AY350740.1| Bubalus bubalis solute carrier family 26 member 2 (SLC26a2) gene,
            exons 4, 5 and complete cds
          Length = 7446

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  ttggcatccaggttctcctg 392
            ||||||||||||||||||||
Sbjct: 5812 ttggcatccaggttctcctg 5831
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>ref|XM_360203.1| Magnaporthe grisea 70-15 hypothetical protein (MG05577.4) partial
           mRNA
          Length = 1755

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 tgacttcttcccaccggacg 256
           ||||||||||||||||||||
Sbjct: 490 tgacttcttcccaccggacg 471
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>gb|AC129188.3| Mus musculus BAC clone RP23-446G23 from chromosome 19, complete
             sequence
          Length = 175245

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    cagacaaaaataaacaagaa 50
             ||||||||||||||||||||
Sbjct: 65645 cagacaaaaataaacaagaa 65664
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>ref|XM_845107.1| PREDICTED: Canis familiaris similar to retinal degeneration B2
           homolog (LOC484155), mRNA
          Length = 1137

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 actccatgcccttgggcagc 480
           ||||||||||||||||||||
Sbjct: 436 actccatgcccttgggcagc 417
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>emb|AL024509.1|HS522P13 Human DNA sequence from clone RP3-522P13 on chromosome 6p21.31-22.3
              Contains a 60S Ribosomal Protein L21 pseudogene, a
              heterogeneous nuclear ribonucleoprotein A3 (HNRPA3) (FBRNP,
              D10S102) pseudogene, two novel genes and a CpG island,
              complete sequence
          Length = 150024

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 27     aacccagacaaaaataaacaagaa 50
              |||||||||||||||||| |||||
Sbjct: 139252 aacccagacaaaaataaagaagaa 139229
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>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    cggcgtgggcgacgacggcg 274
              ||||||||||||||||||||
Sbjct: 241117 cggcgtgggcgacgacggcg 241098
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>emb|BX927204.6| Zebrafish DNA sequence from clone CH211-103B12 in linkage group 23,
              complete sequence
          Length = 165759

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     ataataaaactagctcgatc 99
              ||||||||||||||||||||
Sbjct: 116922 ataataaaactagctcgatc 116903
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>gb|AC109133.2| Homo sapiens chromosome 5 clone RP11-109B6, complete sequence
          Length = 168606

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 34     acaaaaataaacaagaacaggaaa 57
              |||||||||||||| |||||||||
Sbjct: 160914 acaaaaataaacaaaaacaggaaa 160937
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 219     cgccgctcccgccggcgatg 238
               ||||||||||||||||||||
Sbjct: 4473240 cgccgctcccgccggcgatg 4473221
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>gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, complete sequence
          Length = 186031

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 27    aacccagacaaaaataaacaagaa 50
             |||||||||||||||||| |||||
Sbjct: 17414 aacccagacaaaaataaaaaagaa 17437
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 360     cacgagcttgcccttggcatccag 383
               ||||| ||||||||||||||||||
Sbjct: 3052687 cacgatcttgcccttggcatccag 3052710
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>emb|BX322549.5| Zebrafish DNA sequence from clone DKEYP-9D12 in linkage group 24,
             complete sequence
          Length = 62252

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     caatgcagcaatcactttta 22
             ||||||||||||||||||||
Sbjct: 24340 caatgcagcaatcactttta 24321
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 342     cgcgccggcaccggcgagca 361
               ||||||||||||||||||||
Sbjct: 2526742 cgcgccggcaccggcgagca 2526723
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>gb|AC016591.6|AC016591 Homo sapiens chromosome 5 clone CTD-2003D5, complete sequence
          Length = 137366

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    acaaaaataaacaagaacaggaaa 57
             |||||||||||||| |||||||||
Sbjct: 93382 acaaaaataaacaaaaacaggaaa 93359
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>gb|AC008214.4|AC008214 Drosophila melanogaster, chromosome 3R, region 97B-97C, BAC clone
             BACR13P17, complete sequence
          Length = 170403

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ataaacaagaacaggaaaga 59
             ||||||||||||||||||||
Sbjct: 75304 ataaacaagaacaggaaaga 75285
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>emb|CR356233.12| Zebrafish DNA sequence from clone CH211-262N1, complete sequence
          Length = 146900

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     ccaacccagacaaaaataaa 44
              ||||||||||||||||||||
Sbjct: 143713 ccaacccagacaaaaataaa 143732



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     ccaacccagacaaaaataaa 44
              ||||||||||||||||||||
Sbjct: 143212 ccaacccagacaaaaataaa 143231
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>gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94 of 118 of the complete
              sequence
          Length = 322332

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     ataaacaagaacaggaaaga 59
              ||||||||||||||||||||
Sbjct: 319561 ataaacaagaacaggaaaga 319542


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,226,332
Number of Sequences: 3902068
Number of extensions: 4226332
Number of successful extensions: 99396
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98796
Number of HSP's gapped (non-prelim): 597
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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