ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CT2NL_MOUSE (Q99LJ0) CTTNBP2 N-terminal-like protein 29 7.3
2ZBT20_HUMAN (Q9HC78) Zinc finger and BTB domain-containing prote... 28 9.6

>CT2NL_MOUSE (Q99LJ0) CTTNBP2 N-terminal-like protein|
          Length = 638

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = +3

Query: 105 GCAAGKQERATMPPHAPESHDARQQDNDRPQEIVSTPTNTGXXXXSLL 248
           GC  G +   TMP H P S  +    +     + S+P ++      LL
Sbjct: 391 GCPVGTETPVTMPSHLPSSGSSLSPSSTASSSLTSSPCSSPVLTKRLL 438



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>ZBT20_HUMAN (Q9HC78) Zinc finger and BTB domain-containing protein 20 (Zinc|
           finger protein 288) (Dendritic-derived BTB/POZ zinc
           finger protein)
          Length = 741

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 73  KPLLLQTQHSTAAQQGNKKERPCPRTHQKVTTQDNKI 183
           +PL     HSTA+ QG KK   C   ++  T + N +
Sbjct: 558 QPLASSAGHSTASGQGEKKPYECTLCNKTFTAKQNYV 594


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,860,267
Number of Sequences: 219361
Number of extensions: 1160358
Number of successful extensions: 3095
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3093
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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