>SUHW1_HUMAN (P59817) Suppressor of hairy wing homolog 1 (3'OY11.1)|
          Length = 542

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = +1

Query: 73  MPQNEKPVQGDMDHNKWQRLSNYTRATPSSSSTRKVYHNCMYNAC*SKPID-ITKLAKYG 249
           M  N KPV  ++            R TP S+S RK  H   Y A  S+P + +T +AK  
Sbjct: 51  MISNSKPVVSNI----------LNRVTPGSNSRRKKGHFRQYPAHVSQPANHVTSMAK-- 98

Query: 250 PPGVLPAGALQHCRSTQSP*T 312
              ++P  +L   RST SP T
Sbjct: 99  --AIMPV-SLSEGRSTDSPVT 116

>S6A11_MOUSE (P31650) Sodium- and chloride-dependent GABA transporter 4 (GAT4)|
          Length = 627

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 214 WTSMHYTYSCGILYVSTMNWELPVCSLIGVAIC 116
           W       S GI ++  + WEL +C L G  IC
Sbjct: 202 WERRVLAISDGIEHIGNLRWELALCLLAGWTIC 234

>YR640_MIMIV (Q5UR92) Hypothetical protein R640|
          Length = 530

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 95  TGFSFCGIISILSCSFNVLSDVYD*IFILLP 3
           TG + CG    L+  +N   DVYD  FILLP
Sbjct: 336 TGVAICGCRVYLTDFYNQQIDVYDDKFILLP 366

>SCNNG_RABIT (Q28738) Amiloride-sensitive sodium channel gamma-subunit|
           (Epithelial Na+ channel gamma subunit) (Gamma ENaC)
           (Nonvoltage-gated sodium channel 1 gamma subunit)
           (SCNEG) (Gamma NaCH)
          Length = 653

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
 Frame = +1

Query: 190 CMYNAC*SKPIDITKLAKYGPPGVLPAGALQHCRSTQSP*TKTRDYR------QRPPGCI 351
           C+Y+   +K ++    A+Y  P  LP  A  +C   Q P      Y+      Q   GC 
Sbjct: 398 CLYSCFQTKMVEKCGCAQYSQP--LPPAA-NYCNYQQHPNWMYCYYQLYQAFVQEELGCQ 454

Query: 352 SQLRLFCSLKD*LTSAGLAGWQPCNSSTHFYP 447
           S  +  CS K+   +  LA W    S     P
Sbjct: 455 SVCKQSCSFKEWALTTSLAQWPSAVSEKWLLP 486


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,417,766
Number of Sequences: 219361
Number of extensions: 1681589
Number of successful extensions: 3941
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3940
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)