ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187664.1| Oryza sativa (japonica cultivar-group), predic... 204 2e-49
2dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
3gb|AY108960.1| Zea mays PCO105999 mRNA sequence 174 2e-40
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 155 2e-34
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome... 155 2e-34
7ref|XM_479184.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
8ref|XM_506479.1| PREDICTED Oryza sativa (japonica cultivar-group... 46 0.11
9gb|AC154805.2| Mus musculus BAC clone RP24-511O23 from chromosom... 46 0.11
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
11dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
12dbj|AK071567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
13dbj|AK059824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
14ref|XM_450931.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.44
15dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
16dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
17dbj|AK102696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
18ref|XM_365412.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.7
19gb|BC052880.1| Mus musculus solute carrier family 39 (zinc trans... 40 6.8
20gb|AC116452.9| Mus musculus chromosome 1, clone RP24-287C2, comp... 40 6.8
21gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cance... 40 6.8
22gb|BC059214.1| Mus musculus solute carrier family 39 (zinc trans... 40 6.8
23emb|AL139260.19| Human DNA sequence from clone RP5-864K19 on chr... 40 6.8
24gb|BC062918.1| Mus musculus solute carrier family 39 (zinc trans... 40 6.8
25gb|AC103745.2| Homo sapiens chromosome 15, clone RP11-249A12, co... 40 6.8
26dbj|AK136117.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 6.8
27dbj|AK049099.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 6.8
28ref|NM_172653.2| Mus musculus solute carrier family 39 (zinc tra... 40 6.8
29gb|AC135350.6| Homo sapiens chromosome 15, clone RP13-946E15, co... 40 6.8
30gb|AC127511.7| Homo sapiens chromosome 15, clone RP13-188P24, co... 40 6.8
31dbj|AK122483.1| Mus musculus mRNA for mKIAA1265 protein 40 6.8
32gb|DQ322691.1| Glycine max WRKY21 mRNA, complete cds 40 6.8 
>ref|NM_187664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 795

 Score =  204 bits (103), Expect = 2e-49
 Identities = 217/255 (85%)
 Strand = Plus / Minus

                                                                       
Query: 249 gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 308
           |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 776 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 717

                                                                       
Query: 309 aaccaagactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 368
           |||||  |||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 716 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 657

                                                                       
Query: 369 ctgctcgttgaaggattaactgacctcagctgggctagcgggatggcaaccttgtaatag 428
           ||||||||||||||||| ||||| ||||| ||||   | || ||| ||||||| || |||
Sbjct: 656 ctgctcgttgaaggattcactgatctcagttgggtgtggggaatgacaaccttatagtag 597

                                                                       
Query: 429 ctccactcatttttatccccaaccttgtaggcaagtgggttatcactgcagaaggccaac 488
           |||||||||| ||| || ||||||||||| |||||||| ||||| || ||||| |||| |
Sbjct: 596 ctccactcatctttgtctccaaccttgtaagcaagtggattatcgctacagaatgccagc 537

                          
Query: 489 tttacattggacagg 503
           |||  ||||||||||
Sbjct: 536 tttttattggacagg 522
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>dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C18, full
           insert sequence
          Length = 1136

 Score =  204 bits (103), Expect = 2e-49
 Identities = 217/255 (85%)
 Strand = Plus / Minus

                                                                       
Query: 249 gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 308
           |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 927 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 868

                                                                       
Query: 309 aaccaagactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 368
           |||||  |||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 867 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 808

                                                                       
Query: 369 ctgctcgttgaaggattaactgacctcagctgggctagcgggatggcaaccttgtaatag 428
           ||||||||||||||||| ||||| ||||| ||||   | || ||| ||||||| || |||
Sbjct: 807 ctgctcgttgaaggattcactgatctcagttgggtgtggggaatgacaaccttatagtag 748

                                                                       
Query: 429 ctccactcatttttatccccaaccttgtaggcaagtgggttatcactgcagaaggccaac 488
           |||||||||| ||| || ||||||||||| |||||||| ||||| || ||||| |||| |
Sbjct: 747 ctccactcatctttgtctccaaccttgtaagcaagtggattatcgctacagaatgccagc 688

                          
Query: 489 tttacattggacagg 503
           |||  ||||||||||
Sbjct: 687 tttttattggacagg 673
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>gb|AY108960.1| Zea mays PCO105999 mRNA sequence
          Length = 1111

 Score =  174 bits (88), Expect = 2e-40
 Identities = 269/328 (82%), Gaps = 1/328 (0%)
 Strand = Plus / Minus

                                                                       
Query: 177 agtataccacaactgta-tgtataatgcatgctagtccaaacctatagacatcactaagc 235
           |||||| |||||||||| |||||||  ||||||||| | || | ||  ||||||||||||
Sbjct: 937 agtatatcacaactgtaatgtataagacatgctagttccaatccatgaacatcactaagc 878

                                                                       
Query: 236 ttgcaaaatacgggcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagta 295
             | ||| |  | |||||||| |||||||||||||| | ||| || ||| |||| |||||
Sbjct: 877 acgtaaattctgagcctcctgaagtgcttcctgcagattcttcaccgcactgtcatagta 818

                                                                       
Query: 296 cacaaagcccatgaaccaagactcgtgattatcgacagagaccacctggatgtatttctc 355
            || |||||||| |||||| |||| || ||||| ||||| |||||||| |||||||||||
Sbjct: 817 aacgaagcccataaaccaaaactcatggttatcaacagaaaccacctgaatgtatttctc 758

                                                                       
Query: 356 agctgcgtttgttctgctcgttgaaggattaactgacctcagctgggctagcgggatggc 415
            ||||| ||||||||||| ||||| | ||||| ||| | ||| || || || |||||| |
Sbjct: 757 tgctgcatttgttctgcttgttgatgaattaattgatcgcagttgagcaagggggatgac 698

                                                                       
Query: 416 aaccttgtaatagctccactcatttttatccccaaccttgtaggcaagtgggttatcact 475
            |||||||| || ||||||||| |||| || ||||||| ||| |||||||||||||||||
Sbjct: 697 caccttgtagtaactccactcagttttgtctccaacctggtatgcaagtgggttatcact 638

                                       
Query: 476 gcagaaggccaactttacattggacagg 503
            || || ||||  |||||||||||||||
Sbjct: 637 acaaaatgccagttttacattggacagg 610
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  155 bits (78), Expect = 2e-34
 Identities = 135/154 (87%)
 Strand = Plus / Minus

                                                                           
Query: 249     gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 308
               |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 4576261 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 4576202

                                                                           
Query: 309     aaccaagactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 368
               |||||  |||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 4576201 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 4576142

                                                 
Query: 369     ctgctcgttgaaggattaactgacctcagctggg 402
               ||||||||||||||||| ||||| ||||| ||||
Sbjct: 4576141 ctgctcgttgaaggattcactgatctcagttggg 4576108



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                           
Query: 417     accttgtaatagctccactcatttttatccccaaccttgtaggcaagtgggttatcactg 476
               ||||| || ||||||||||||| ||| || ||||||||||| |||||||| ||||| || 
Sbjct: 4575795 accttatagtagctccactcatctttgtctccaaccttgtaagcaagtggattatcgcta 4575736

                                          
Query: 477     cagaaggccaactttacattggacagg 503
               ||||| |||| ||||  ||||||||||
Sbjct: 4575735 cagaatgccagctttttattggacagg 4575709
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  155 bits (78), Expect = 2e-34
 Identities = 135/154 (87%)
 Strand = Plus / Minus

                                                                           
Query: 249     gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 308
               |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 4576376 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 4576317

                                                                           
Query: 309     aaccaagactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 368
               |||||  |||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 4576316 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 4576257

                                                 
Query: 369     ctgctcgttgaaggattaactgacctcagctggg 402
               ||||||||||||||||| ||||| ||||| ||||
Sbjct: 4576256 ctgctcgttgaaggattcactgatctcagttggg 4576223



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                           
Query: 417     accttgtaatagctccactcatttttatccccaaccttgtaggcaagtgggttatcactg 476
               ||||| || ||||||||||||| ||| || ||||||||||| |||||||| ||||| || 
Sbjct: 4575910 accttatagtagctccactcatctttgtctccaaccttgtaagcaagtggattatcgcta 4575851

                                          
Query: 477     cagaaggccaactttacattggacagg 503
               ||||| |||| ||||  ||||||||||
Sbjct: 4575850 cagaatgccagctttttattggacagg 4575824
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>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09,
             complete sequence
          Length = 148894

 Score =  155 bits (78), Expect = 2e-34
 Identities = 135/154 (87%)
 Strand = Plus / Minus

                                                                         
Query: 249   gcctcctggagtgcttcctgcaggtgctttacagcattgtcgtagtacacaaagcccatg 308
             |||||||| |||||||||||||| | |||||| ||  |||| |||||||| |||||||||
Sbjct: 17216 gcctcctgaagtgcttcctgcagattctttacggcgctgtcatagtacacgaagcccatg 17157

                                                                         
Query: 309   aaccaagactcgtgattatcgacagagaccacctggatgtatttctcagctgcgtttgtt 368
             |||||  |||| |||||||| || || |||||||||||||||||||||| ||| ||||||
Sbjct: 17156 aaccagaactcatgattatcaacggaaaccacctggatgtatttctcagatgcatttgtt 17097

                                               
Query: 369   ctgctcgttgaaggattaactgacctcagctggg 402
             ||||||||||||||||| ||||| ||||| ||||
Sbjct: 17096 ctgctcgttgaaggattcactgatctcagttggg 17063



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                         
Query: 417   accttgtaatagctccactcatttttatccccaaccttgtaggcaagtgggttatcactg 476
             ||||| || ||||||||||||| ||| || ||||||||||| |||||||| ||||| || 
Sbjct: 16750 accttatagtagctccactcatctttgtctccaaccttgtaagcaagtggattatcgcta 16691

                                        
Query: 477   cagaaggccaactttacattggacagg 503
             ||||| |||| ||||  ||||||||||
Sbjct: 16690 cagaatgccagctttttattggacagg 16664
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>ref|XM_479184.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1000

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 287 gtcgtagtacacaaagcccatgaaccaagactcgtgattatcgacagagaccacctggat 346
           ||||||||  || ||||||||||||||  | || || || |||||||| |||||||||||
Sbjct: 690 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 631

              
Query: 347 gta 349
           |||
Sbjct: 630 gta 628
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>ref|XM_506479.1| PREDICTED Oryza sativa (japonica cultivar-group), P0594D10.123 mRNA
          Length = 1055

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 287 gtcgtagtacacaaagcccatgaaccaagactcgtgattatcgacagagaccacctggat 346
           ||||||||  || ||||||||||||||  | || || || |||||||| |||||||||||
Sbjct: 746 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 687

              
Query: 347 gta 349
           |||
Sbjct: 686 gta 684
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>gb|AC154805.2| Mus musculus BAC clone RP24-511O23 from chromosome 14, complete
             sequence
          Length = 151445

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 247   gggcctcctggagtgcttcctgc 269
             |||||||||||||||||||||||
Sbjct: 52270 gggcctcctggagtgcttcctgc 52248
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                            
Query: 287      gtcgtagtacacaaagcccatgaaccaagactcgtgattatcgacagagaccacctggat 346
                ||||||||  || ||||||||||||||  | || || || |||||||| |||||||||||
Sbjct: 25625913 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 25625854

                   
Query: 347      gta 349
                |||
Sbjct: 25625853 gta 25625851
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>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0594D10
          Length = 143200

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                         
Query: 287   gtcgtagtacacaaagcccatgaaccaagactcgtgattatcgacagagaccacctggat 346
             ||||||||  || ||||||||||||||  | || || || |||||||| |||||||||||
Sbjct: 79886 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 79827

                
Query: 347   gta 349
             |||
Sbjct: 79826 gta 79824
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>dbj|AK071567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100G12, full
           insert sequence
          Length = 1055

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 287 gtcgtagtacacaaagcccatgaaccaagactcgtgattatcgacagagaccacctggat 346
           ||||||||  || ||||||||||||||  | || || || |||||||| |||||||||||
Sbjct: 746 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 687

              
Query: 347 gta 349
           |||
Sbjct: 686 gta 684
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>dbj|AK059824.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E06, full
           insert sequence
          Length = 1000

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 287 gtcgtagtacacaaagcccatgaaccaagactcgtgattatcgacagagaccacctggat 346
           ||||||||  || ||||||||||||||  | || || || |||||||| |||||||||||
Sbjct: 690 gtcgtagttgacgaagcccatgaaccagaagtcatggttgtcgacagaaaccacctggat 631

              
Query: 347 gta 349
           |||
Sbjct: 630 gta 628
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>ref|XM_450931.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1017

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 264 tcctgcaggtgctttacagcattgtcgtagtacacaaagcccatgaacca 313
           ||||||| |||||| || ||  ||||||||| |||||||||||| |||||
Sbjct: 674 tcctgcaagtgcttgaccgcgctgtcgtagttcacaaagcccatcaacca 625
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                  
Query: 264      tcctgcaggtgctttacagcattgtcgtagtacacaaagcccatgaacca 313
                ||||||| |||||| || ||  ||||||||| |||||||||||| |||||
Sbjct: 17640492 tcctgcaagtgcttgaccgcgctgtcgtagttcacaaagcccatcaacca 17640443
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>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1005_D12
          Length = 150588

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 264   tcctgcaggtgctttacagcattgtcgtagtacacaaagcccatgaacca 313
             ||||||| |||||| || ||  ||||||||| |||||||||||| |||||
Sbjct: 89214 tcctgcaagtgcttgaccgcgctgtcgtagttcacaaagcccatcaacca 89165
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>dbj|AK102696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103F22, full
           insert sequence
          Length = 1016

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 264 tcctgcaggtgctttacagcattgtcgtagtacacaaagcccatgaacca 313
           ||||||| |||||| || ||  ||||||||| |||||||||||| |||||
Sbjct: 674 tcctgcaagtgcttgaccgcgctgtcgtagttcacaaagcccatcaacca 625
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>ref|XM_365412.1| Magnaporthe grisea 70-15 hypothetical protein (MG02114.4) partial
            mRNA
          Length = 2439

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 411  atggcaaccttgtaatagctc 431
            |||||||||||||||||||||
Sbjct: 2195 atggcaaccttgtaatagctc 2175
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>gb|BC052880.1| Mus musculus solute carrier family 39 (zinc transporter), member 10,
            mRNA (cDNA clone MGC:60701 IMAGE:30045566), complete cds
          Length = 3079

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   gatagatatgatgccacaga 82
            ||||||||||||||||||||
Sbjct: 1412 gatagatatgatgccacaga 1393
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>gb|AC116452.9| Mus musculus chromosome 1, clone RP24-287C2, complete sequence
          Length = 171792

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     gatagatatgatgccacaga 82
              ||||||||||||||||||||
Sbjct: 103260 gatagatatgatgccacaga 103279
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>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 178502

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aggaagcaaaatgaaaattc 22
             ||||||||||||||||||||
Sbjct: 55423 aggaagcaaaatgaaaattc 55442
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>gb|BC059214.1| Mus musculus solute carrier family 39 (zinc transporter), member
           10, mRNA (cDNA clone IMAGE:6417451), complete cds
          Length = 3865

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  gatagatatgatgccacaga 82
           ||||||||||||||||||||
Sbjct: 182 gatagatatgatgccacaga 163
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>emb|AL139260.19| Human DNA sequence from clone RP5-864K19 on chromosome 1p32.3-34.1
             Contains the MYCBP gene for c-myc binding protein, the
             GJA10 gene for gap junction protein alpha 10, the RHBDL2
             gene for rhomboid veinlet-like 2 (Drosophila), a novel
             gene and the RRAGC gene for Ras-related GTP binding C,
             complete sequence
          Length = 155138

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   tggagtgcttcctgcaggtg 274
             ||||||||||||||||||||
Sbjct: 54441 tggagtgcttcctgcaggtg 54422
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>gb|BC062918.1| Mus musculus solute carrier family 39 (zinc transporter), member 10,
            mRNA (cDNA clone MGC:65685 IMAGE:6833098), complete cds
          Length = 5003

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   gatagatatgatgccacaga 82
            ||||||||||||||||||||
Sbjct: 1298 gatagatatgatgccacaga 1279
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>gb|AC103745.2| Homo sapiens chromosome 15, clone RP11-249A12, complete sequence
          Length = 82642

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     aggaagcaaaatgaaaattc 22
             ||||||||||||||||||||
Sbjct: 36721 aggaagcaaaatgaaaattc 36702
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>dbj|AK136117.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420458L22 product:solute carrier
            family 39 (zinc transporter), member 10, full insert
            sequence
          Length = 2375

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   gatagatatgatgccacaga 82
            ||||||||||||||||||||
Sbjct: 1010 gatagatatgatgccacaga 991
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>dbj|AK049099.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
          enriched library, clone:C230098N10 product:weakly
          similar to CDNA FLJ32338 FIS, CLONE PROST2005919,
          MODERATELY SIMILAR TO HUMAN BREAST CANCER, ESTROGEN
          REGULATED LIV-1 PROTEIN (LIV-1) MRNA [Homo sapiens],
          full insert sequence
          Length = 3706

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 63 gatagatatgatgccacaga 82
          ||||||||||||||||||||
Sbjct: 44 gatagatatgatgccacaga 25
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>ref|NM_172653.2| Mus musculus solute carrier family 39 (zinc transporter), member 10
            (Slc39a10), mRNA
          Length = 5003

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   gatagatatgatgccacaga 82
            ||||||||||||||||||||
Sbjct: 1298 gatagatatgatgccacaga 1279
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>gb|AC135350.6| Homo sapiens chromosome 15, clone RP13-946E15, complete sequence
          Length = 158316

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      aggaagcaaaatgaaaattc 22
              ||||||||||||||||||||
Sbjct: 132686 aggaagcaaaatgaaaattc 132705
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>gb|AC127511.7| Homo sapiens chromosome 15, clone RP13-188P24, complete sequence
          Length = 201949

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    aggaagcaaaatgaaaattc 22
            ||||||||||||||||||||
Sbjct: 8131 aggaagcaaaatgaaaattc 8150
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>dbj|AK122483.1| Mus musculus mRNA for mKIAA1265 protein
          Length = 4395

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  gatagatatgatgccacaga 82
           ||||||||||||||||||||
Sbjct: 732 gatagatatgatgccacaga 713
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>gb|DQ322691.1| Glycine max WRKY21 mRNA, complete cds
          Length = 591

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 310 accaagactcgtgattatcgacag 333
           |||||||||| |||||||||||||
Sbjct: 145 accaagactcttgattatcgacag 122


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,995,487
Number of Sequences: 3902068
Number of extensions: 3995487
Number of successful extensions: 70836
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70717
Number of HSP's gapped (non-prelim): 117
length of query: 503
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 481
effective length of database: 17,147,199,772
effective search space: 8247803090332
effective search space used: 8247803090332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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