ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart39f07 |
|---|---|
| Clone Library Name | barley_pub |
>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (LeOPR1) Length = 376 Score = 145 bits (367), Expect = 4e-35 Identities = 66/98 (67%), Positives = 80/98 (81%) Frame = -1 Query: 473 VEPRMAIVDGRTQIPHGLLPFRKAFDGTFIAAGGYDREEGNKVVADDYADLVAYGRIFLA 294 VEPRM + + L+P RKA+ GTFI AGGYDRE+GN+ + +D ADLVAYGR+F++ Sbjct: 276 VEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAYGRLFIS 335 Query: 293 NPDLPKRFELNSALNKYDRNTFYTQDPIVGYTDYPFLE 180 NPDLPKRFELN+ LNKY+R+TFYT DPIVGYTDYPFLE Sbjct: 336 NPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFLE 373
>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (AtOPR1) (FS-AT-I) Length = 372 Score = 136 bits (342), Expect = 3e-32 Identities = 63/100 (63%), Positives = 77/100 (77%) Frame = -1 Query: 473 VEPRMAIVDGRTQIPHGLLPFRKAFDGTFIAAGGYDREEGNKVVADDYADLVAYGRIFLA 294 +E RM + PH L+P RKAF GTFI+AGG+ RE+GN+ V+ DLVAYGR FLA Sbjct: 272 IEARMKTMGEVHACPHTLMPMRKAFKGTFISAGGFTREDGNEAVSKGRTDLVAYGRWFLA 331 Query: 293 NPDLPKRFELNSALNKYDRNTFYTQDPIVGYTDYPFLEGS 174 NPDLPKRF++++ LNKYDR TFYT DP+VGYTDYPFLE + Sbjct: 332 NPDLPKRFQVDAPLNKYDRPTFYTSDPVVGYTDYPFLEST 371
>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase 2) (AtOPR2) Length = 374 Score = 135 bits (339), Expect = 7e-32 Identities = 63/100 (63%), Positives = 77/100 (77%) Frame = -1 Query: 473 VEPRMAIVDGRTQIPHGLLPFRKAFDGTFIAAGGYDREEGNKVVADDYADLVAYGRIFLA 294 +EPRM V H L+P R+AF GTFI+AGG+ RE+GN+ VA DLVAYGR FLA Sbjct: 274 IEPRMKTVGEIAACSHTLMPMREAFKGTFISAGGFTREDGNEAVAKGRTDLVAYGRWFLA 333 Query: 293 NPDLPKRFELNSALNKYDRNTFYTQDPIVGYTDYPFLEGS 174 NPDLPKRF+L++ LNKY+R+TFYT DP+VGYTDYP LE + Sbjct: 334 NPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYTDYPSLEST 373
>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)| (LeOPR2) Length = 355 Score = 134 bits (336), Expect = 2e-31 Identities = 57/92 (61%), Positives = 76/92 (82%) Frame = -1 Query: 455 IVDGRTQIPHGLLPFRKAFDGTFIAAGGYDREEGNKVVADDYADLVAYGRIFLANPDLPK 276 +++ R + LLP RKAF GT IA+GGY + +G K + ++YADL+++GR+FLANPDLPK Sbjct: 261 VMEPRETVNRSLLPIRKAFKGTLIASGGYGKSDGEKAIDENYADLISFGRMFLANPDLPK 320 Query: 275 RFELNSALNKYDRNTFYTQDPIVGYTDYPFLE 180 RFE+N+ LNKY+R+TFYT DPI+GYTDYPFLE Sbjct: 321 RFEVNAPLNKYNRSTFYTNDPIIGYTDYPFLE 352
>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) Length = 396 Score = 114 bits (285), Expect = 1e-25 Identities = 51/81 (62%), Positives = 65/81 (80%) Frame = -1 Query: 410 RKAFDGTFIAAGGYDREEGNKVVADDYADLVAYGRIFLANPDLPKRFELNSALNKYDRNT 231 R A+ GTFI +GGY RE G + VA ADLV+YGR+F++NPDL R +LN+ LNKY+R T Sbjct: 309 RNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKT 368 Query: 230 FYTQDPIVGYTDYPFLEGSNA 168 FYTQDP+VGYTDYPFL+G+ + Sbjct: 369 FYTQDPVVGYTDYPFLQGNGS 389
>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (Delayed dehiscence 1) (AtOPR3) Length = 391 Score = 107 bits (266), Expect = 2e-23 Identities = 46/76 (60%), Positives = 63/76 (82%) Frame = -1 Query: 410 RKAFDGTFIAAGGYDREEGNKVVADDYADLVAYGRIFLANPDLPKRFELNSALNKYDRNT 231 R A++GTF+++GG+++E G + V ADLV+YGR+F+ANPDL RF+++ LNKY+R T Sbjct: 310 RMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKT 369 Query: 230 FYTQDPIVGYTDYPFL 183 FYTQDP+VGYTDYPFL Sbjct: 370 FYTQDPVVGYTDYPFL 385
>OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like protein 1 (EC| 1.3.1.-) Length = 324 Score = 101 bits (252), Expect = 9e-22 Identities = 49/76 (64%), Positives = 56/76 (73%) Frame = -1 Query: 473 VEPRMAIVDGRTQIPHGLLPFRKAFDGTFIAAGGYDREEGNKVVADDYADLVAYGRIFLA 294 +EPRM V + L P R AF+GTFI AGGY RE+GNK VA+ DLVAYGR+FLA Sbjct: 249 IEPRMKTVSEIFECRESLTPMRNAFNGTFIVAGGYTREDGNKAVAEGRTDLVAYGRLFLA 308 Query: 293 NPDLPKRFELNSALNK 246 NPDLPKRFELN+ LNK Sbjct: 309 NPDLPKRFELNAPLNK 324
>OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 392 Score = 74.7 bits (182), Expect = 1e-13 Identities = 38/78 (48%), Positives = 51/78 (65%) Frame = -1 Query: 419 LPFRKAFDGTFIAAGGYDREEGNKVVADDYADLVAYGRIFLANPDLPKRFELNSALNKYD 240 L ++ + FI AGG+DR+ ++ A+ LVA+GR FL+NPDLP R + N LNK+D Sbjct: 305 LIYKNLWGDPFITAGGHDRDSAIQM-AEQENTLVAFGRYFLSNPDLPFRLKYNLPLNKWD 363 Query: 239 RNTFYTQDPIVGYTDYPF 186 R TFYT+ GY DYPF Sbjct: 364 RATFYTKMSPKGYIDYPF 381
>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 382 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/75 (49%), Positives = 49/75 (65%) Frame = -1 Query: 410 RKAFDGTFIAAGGYDREEGNKVVADDYADLVAYGRIFLANPDLPKRFELNSALNKYDRNT 231 +K + G FI AGGYD E + A++ LVA+GR F+ANPDL R + + LNK+DR++ Sbjct: 301 QKYWKGPFITAGGYDPETAVQA-ANERGVLVAFGRNFIANPDLVFRIKHHIPLNKWDRSS 359 Query: 230 FYTQDPIVGYTDYPF 186 FY GYTDYPF Sbjct: 360 FYLPKTEKGYTDYPF 374
>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)| Length = 399 Score = 66.2 bits (160), Expect = 4e-11 Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 7/105 (6%) Frame = -1 Query: 473 VEPRM---AIVDGRTQIPHGLLPFRKA-FDGTFIAAGGYDREEGNKVVADDYAD---LVA 315 VEPR+ ++V+G + G F + + G I AG Y +VV + D L+ Sbjct: 288 VEPRVTDPSLVEGEGEYSEGTNDFAYSIWKGPIIRAGNYALHP--EVVREQVKDPRTLIG 345 Query: 314 YGRIFLANPDLPKRFELNSALNKYDRNTFYTQDPIVGYTDYPFLE 180 YGR F++NPDL R E LNKYDR+TFYT GYTDYP E Sbjct: 346 YGRFFISNPDLVYRLEEGLPLNKYDRSTFYTMS-AEGYTDYPTYE 389
>OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yellow enzyme 2)| Length = 399 Score = 58.2 bits (139), Expect = 1e-08 Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 7/105 (6%) Frame = -1 Query: 473 VEPRMA---IVDGRTQIPHGLLPFRKA-FDGTFIAAGGYDREEGNKVVADDYAD---LVA 315 VEPR+ + +G + G F + + G I AG + +VV ++ D L+ Sbjct: 288 VEPRVTNPFLTEGEGEYNGGSNKFAYSIWKGPIIRAGNFALHP--EVVREEVKDPRTLIG 345 Query: 314 YGRIFLANPDLPKRFELNSALNKYDRNTFYTQDPIVGYTDYPFLE 180 YGR F++NPDL R E LNKYDR+TFY GY DYP E Sbjct: 346 YGRFFISNPDLVDRLEKGLPLNKYDRDTFYKMS-AEGYIDYPTYE 389
>OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 399 Score = 58.2 bits (139), Expect = 1e-08 Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 7/105 (6%) Frame = -1 Query: 473 VEPRMA---IVDGRTQIPHGLLPF-RKAFDGTFIAAGGYDREEGNKVVADDYAD---LVA 315 VEPR+ + +G + G F + G I AG + +VV ++ D L+ Sbjct: 288 VEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPVIRAGNFALHP--EVVREEVKDKRTLIG 345 Query: 314 YGRIFLANPDLPKRFELNSALNKYDRNTFYTQDPIVGYTDYPFLE 180 YGR F++NPDL R E LNKYDR+TFY Q GY DYP E Sbjct: 346 YGRFFISNPDLVDRLEKGLPLNKYDRDTFY-QMSAHGYIDYPTYE 389
>NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-ethylmaleimide| reducing enzyme) Length = 365 Score = 54.7 bits (130), Expect = 1e-07 Identities = 30/76 (39%), Positives = 39/76 (51%) Frame = -1 Query: 410 RKAFDGTFIAAGGYDREEGNKVVADDYADLVAYGRIFLANPDLPKRFELNSALNKYDRNT 231 R F G I AG Y E+ ++ D VA+GR ++ANPDL R + + LN + Sbjct: 291 RARFHGPIIGAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAES 350 Query: 230 FYTQDPIVGYTDYPFL 183 FY GYTDYP L Sbjct: 351 FY-GGGAEGYTDYPTL 365
>KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 398 Score = 54.3 bits (129), Expect = 2e-07 Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 19/119 (15%) Frame = -1 Query: 464 RMAIVDGRTQIPHGLLPFRKAFDGTFIAAGG-----YDREEGNKVVADDYA--------- 327 R+A VD P PF+ F+G + GG Y +GN + +YA Sbjct: 281 RLAYVD--LVEPRVTSPFQPEFEGWY--KGGTNEFVYSVWKGNVLRVGNYALDPDAAITD 336 Query: 326 -----DLVAYGRIFLANPDLPKRFELNSALNKYDRNTFYTQDPIVGYTDYPFLEGSNAE 165 L+ YGR F+ANPDL +R E LN+YDR +FY GY DYP E + A+ Sbjct: 337 SKNPNTLIGYGRAFIANPDLVERLEKGLPLNQYDRPSFYKMS-AEGYIDYPTYEEAVAK 394
>EBP1_CANAL (P43084) Probable NADPH dehydrogenase (EC 1.6.99.1)| (Estrogen-binding protein) (EBP) Length = 406 Score = 43.5 bits (101), Expect = 3e-04 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Frame = -1 Query: 407 KAFDGTFIAAGGY--DREEGNKVVADDYAD--LVAYGRIFLANPDLPKRFELNSALNKYD 240 K + G FI AG Y D E ++ D D ++ + R F +NPDL ++ +L LN Y+ Sbjct: 319 KIWKGNFIRAGNYTYDAPEFKTLINDLKNDRSIIGFSRFFTSNPDLVEKLKLGKPLNYYN 378 Query: 239 RNTFY 225 R FY Sbjct: 379 REEFY 383
>NADO_THEBR (P32382) NADH oxidase (EC 1.-.-.-)| Length = 651 Score = 30.8 bits (68), Expect = 1.9 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -1 Query: 362 EEGNKVVADDYADLVAYGRIFLANPDLPKR 273 E K++A+ AD VA GR +A+P+ PK+ Sbjct: 303 EFAEKIIAEGRADFVAVGRGLIADPEWPKK 332
>VG74_HHV8 (Q98146) G-protein coupled receptor homolog 74| Length = 342 Score = 30.8 bits (68), Expect = 1.9 Identities = 13/42 (30%), Positives = 26/42 (61%) Frame = -2 Query: 214 LSLATQIILFLKAQTPSSSSTRLELVTWLVYIICNDFSLVCL 89 +SL ++++FL S+ RLE+ + +Y+ + FS+VC+ Sbjct: 98 ISLLAEVLMFLFPNIISTGLCRLEIFFYYLYVYLDIFSVVCV 139
>HD_HUMAN (P42858) Huntingtin (Huntington disease protein) (HD protein)| Length = 3144 Score = 29.3 bits (64), Expect = 5.4 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -2 Query: 445 AARKYPTGSCPSEKHSTALSLLLEGMTERKATKWLPTTMLISLLMEGSFWLI 290 A R C S L L+++ +T R ++ WL T L+ L E F L+ Sbjct: 831 AVRNCVMSLCSSSYSELGLQLIIDVLTLRNSSYWLVRTELLETLAEIDFRLV 882
>PER60_ARATH (Q9FMR0) Peroxidase 60 precursor (EC 1.11.1.7) (Atperox P60)| (ATP14a) Length = 331 Score = 28.5 bits (62), Expect = 9.2 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +3 Query: 276 LRQIWISQKDPSISNEISIVVGNHFVAFLSVIPSSSNESAVECFSEG 416 LR + SQ ++ N +S VVG F+ S+ P+ +CFS G Sbjct: 28 LRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNG 74
>PCSK5_MOUSE (Q04592) Proprotein convertase subtilisin/kexin type 5 precursor (EC| 3.4.21.-) (Proprotein convertase PC5) (Subtilisin/kexin-like protease PC5) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) Length = 1877 Score = 28.5 bits (62), Expect = 9.2 Identities = 26/102 (25%), Positives = 43/102 (42%) Frame = -2 Query: 379 LEGMTERKATKWLPTTMLISLLMEGSFWLIQICLRDSSSIQP*TSTTATLSIHKILSLAT 200 +EG +A +++ SLL + W +QI +S QP S+ T + S T Sbjct: 1170 VEGKDWNEAVPTEKPSLVRSLLQDRRKWKVQIKRDATSQNQPCHSSCKTCNGSLCASCPT 1229 Query: 199 QIILFLKAQTPSSSSTRLELVTWLVYIICNDFSLVCLCTGMC 74 + L+L+A PS VT C++ + C +C Sbjct: 1230 GMYLWLQACVPSCPQGTWPSVTSGSCEKCSEDCVSCSGADLC 1271 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,580,183 Number of Sequences: 219361 Number of extensions: 1424078 Number of successful extensions: 3862 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 3798 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3861 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
