ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart39f02 |
|---|---|
| Clone Library Name | barley_pub |
>DFRA_DIACA (P51104) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 360 Score = 60.8 bits (146), Expect = 2e-09 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Frame = -2 Query: 498 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFA 319 +V++ D+ ++HI YE+P ANGRY D+ K++ E YPE+ VP K D Sbjct: 244 FVHLDDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVPTKFKDYKEDM 303 Query: 318 TIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFLTFESSH 190 Q S K+ LG E L+ +ES + KG L H Sbjct: 304 GQVQFSSKKLTDLGFEFKYGLKDMYTAAVESCRAKGLLPLSLEH 347
>DFRA_CALCH (P51103) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 364 Score = 55.8 bits (133), Expect = 7e-08 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 1/105 (0%) Frame = -2 Query: 498 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFA 319 +V++ D+ HI YE+P A GRY ++ L ++I + +PE+ VP + A Sbjct: 229 YVHLDDLCECHIFLYENPEAKGRYICSKQDATIHQLARMIKQKWPEYHVPTQFAGIDEEL 288 Query: 318 TIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFLTFESSHL 187 S K+ +G + LE K I+S KEKGFL + ++ + Sbjct: 289 PTVSFSSKKLIDMGFKFKYDLEDMFKGAIDSCKEKGFLPYSTNEV 333
>DFRA_GERHY (P51105) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 366 Score = 52.4 bits (124), Expect = 7e-07 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Frame = -2 Query: 498 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFA 319 +V++ D+ HI YE+P A GRY L KII + +PE+ +P K Sbjct: 229 YVHLDDLCECHIYLYENPKAKGRYICSSHDATIHQLAKIIKDKWPEYYIPTKFPGIDEEL 288 Query: 318 TIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFLTFES 196 I S K+ G E LE K I++ +EKG L + + Sbjct: 289 PIVSFSSKKLIDTGFEFKYNLEDMFKGAIDTCREKGLLPYST 330
>DFRA_PETHY (P14720) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 380 Score = 49.3 bits (116), Expect = 6e-06 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Frame = -2 Query: 498 WVNVKDVALAHILAYEDPSANGRY-CMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPF 322 +V++ D+ AHI YE P A+GR+ C I + D+ K++ E +PE+ VP + Sbjct: 238 YVHLDDLCEAHIFLYEHPKADGRFICSSHHAIIY-DVAKMVREKWPEYYVPTEFKGIDKD 296 Query: 321 ATIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFLTFES 196 + S K+ +G + LE K I++ ++K L F + Sbjct: 297 LPVVSFSSKKLTDMGFQFKYTLEDMYKGAIDTCRQKQLLPFST 339
>DFRA_ANTMA (P14721) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 446 Score = 49.3 bits (116), Expect = 6e-06 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Frame = -2 Query: 498 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFA 319 +V++ D+ HI +E P A GRY D+ K+I E +PE+ +PD+ Sbjct: 240 YVHLDDLCEGHIFLFEYPKAEGRYICSSHDATIYDIAKLITENWPEYHIPDEFEGIDKDI 299 Query: 318 TIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFLTFESSH 190 + S K+ +G LE ++ I++ +EKG L + + + Sbjct: 300 PVVSFSSKKMIGMGFIFKYTLEDMVRGAIDTCREKGMLPYSTKN 343
>DFRA_ARATH (P51102) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) (TRANSPARENT TESTA 3 protein) Length = 382 Score = 47.4 bits (111), Expect = 2e-05 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 1/104 (0%) Frame = -2 Query: 498 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFA 319 +V++ D+ AHI YE +A GRY + K + YPE+ VP Sbjct: 228 YVHLDDLCNAHIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPSTFEGVDENL 287 Query: 318 TIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFLTFESSH 190 + S K+ +G LE E+IE+ ++KGFL S+ Sbjct: 288 KSIEFSSKKLTDMGFNFKYSLEEMFIESIETCRQKGFLPVSLSY 331
>DFRA_VITVI (P51110) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 337 Score = 47.4 bits (111), Expect = 2e-05 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 1/98 (1%) Frame = -2 Query: 498 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFA 319 +V++ D+ AHI +E+P A GRY DL K++ E YPE+ +P + Sbjct: 228 FVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENL 287 Query: 318 TIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFL 208 S K+ LG E LE +++ + KG L Sbjct: 288 KSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLL 325
>DFRA_LYCES (P51107) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 379 Score = 45.1 bits (105), Expect = 1e-04 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Frame = -2 Query: 498 WVNVKDVALAHILAYEDPSANGRY-CMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPF 322 +V++ D+ AHI YE P A GR+ C I + D+ K++ + +PE+ VP + Sbjct: 237 YVHLDDLCEAHIFLYEHPKAEGRFICSSHHAIIY-DVAKMVRQKWPEYYVPTEFKGIDKD 295 Query: 321 ATIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFLTFES 196 + S K+ + + LE K IE+ ++K L F + Sbjct: 296 LALVSFSSKKLMDIKFQFKHTLEDMYKGAIETCRQKQLLPFST 338
>DFRA_MAIZE (P51108) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 357 Score = 40.8 bits (94), Expect = 0.002 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 2/98 (2%) Frame = -2 Query: 495 VNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFAT 316 +++ D+ A I +E+P+A GRY + L ++ + YPE+ VP + Sbjct: 234 IHLDDLCDAEIFLFENPAAAGRYVCSSHDVTIHGLAAMLRDRYPEYDVPQRFPGIQDDLQ 293 Query: 315 IYQVSKDKIRSLG--MELIPLETSLKETIESLKEKGFL 208 + S K++ LG LE I + +EKG + Sbjct: 294 PVRFSSKKLQDLGFTFRYKTLEDMFDAAIRTCQEKGLI 331
>YGP7_YEAST (P53111) Hypothetical protein YGL157W| Length = 347 Score = 37.7 bits (86), Expect = 0.019 Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Frame = -2 Query: 513 NFCFGWVNVKDVALAHILAYEDPSANG-RYCMVERVIHHSDLVKIIHEMYPE 361 N+C +++V+DV+ AH++A E P G R + E + ++V I++E +P+ Sbjct: 238 NYCGPFIDVRDVSKAHLVAIEKPECTGQRLVLSEGLFCCQEIVDILNEEFPQ 289
>DFRA_HORVU (P51106) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 354 Score = 35.4 bits (80), Expect = 0.092 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 1/97 (1%) Frame = -2 Query: 495 VNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFAT 316 V++ D+ A +E P ANGRY L +++ + +PE+ +P K A Sbjct: 229 VHLDDLCDAMTFLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDIPQKFAGVDDNLQ 288 Query: 315 IYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFL 208 S K+ G E I + ++KG + Sbjct: 289 PIHFSSKKLLDHGFSFRYTTEDMFDAAIHTCRDKGLI 325
>Y058_AQUAE (O66470) Hypothetical protein aq_058| Length = 116 Score = 34.3 bits (77), Expect = 0.20 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -2 Query: 393 LVKIIHEMYPEFPVPDKCADDAPFATIYQVSKD 295 L KI+ E++ E P P+K D++ + T+Y V KD Sbjct: 46 LSKIVEEVFKEIPNPEKKLDESLYTTLYSVLKD 78
>YGD9_YEAST (P53183) Hypothetical protein YGL039W| Length = 348 Score = 34.3 bits (77), Expect = 0.20 Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Frame = -2 Query: 513 NFCFGWVNVKDVALAHILAYEDPSANG-RYCMVERVIHHSDLVKIIHEMYPE 361 N+ +++V+DV+ AH+LA+E P G R + E + + + I++E +P+ Sbjct: 239 NYSGPFIDVRDVSKAHLLAFEKPECAGQRLFLCEDMFCSQEALDILNEEFPQ 290
>YAB2_SCHPO (Q09804) Hypothetical protein C2G11.02 in chromosome I| Length = 1318 Score = 33.9 bits (76), Expect = 0.27 Identities = 17/59 (28%), Positives = 30/59 (50%) Frame = +1 Query: 199 LKSQKSFLFQTLDSLLEARLQGNQLHAQTSYLVL*HLVDCGKRSVICTLVWHWKFRIHL 375 L +F + ++ LE + A+ S+L+L +VD GK ++ TL+ W +HL Sbjct: 589 LHEDTTFPMRVVNYALEYSSKALDKFAENSHLILLDMVDVGKPDLVLTLLCRWLHMVHL 647
>ATG27_ASHGO (Q757Z8) Autophagy-related protein 27 precursor| Length = 297 Score = 31.6 bits (70), Expect = 1.3 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = -2 Query: 357 PVPDKCADDAPFATIYQVSKDKIRSLGMELIPLETSLKETIESLKE 220 PVPDKC DDA F QV D + ++ + + + +E L++ Sbjct: 66 PVPDKCKDDAMFCHRQQVKLDDGKEYVTQVFDVPRNQEVDVEELRD 111
>GRE2_YEAST (Q12068) NADPH-dependent methylglyoxal reductase GRE2 (EC| 1.1.1.283) (Genes de respuesta a estres protein 2) Length = 342 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Frame = -2 Query: 501 GWVNVKDVALAHILAYEDPSANGRYCMV-ERVIHHSDLVKIIHEMYP 364 G+++V+DVA AH++A++ G+ +V E D++ I++E +P Sbjct: 238 GYIDVRDVAKAHLVAFQKRETIGQRLIVSEARFTMQDVLDILNEDFP 284
>PO152_SCHPO (O94385) Probable nucleoporin POM152-like| Length = 1250 Score = 30.0 bits (66), Expect = 3.9 Identities = 15/63 (23%), Positives = 31/63 (49%) Frame = +2 Query: 101 TMPRFISGAHKHVRIQRLPLVMPKQRKFHRWLDSKVRNPFSFKLSIVSLRLVSRGISSMP 280 T+P++I +H + + LV R + L S +NP +L + L+ RG+ ++ Sbjct: 190 TIPKYIQYSHVDLETKEETLVEVSGRSLRKLLSSSSKNPKEPRLQTIYLKTNKRGLYTLK 249 Query: 281 RLL 289 ++ Sbjct: 250 HVV 252
>TLR1_MOUSE (Q9EPQ1) Toll-like receptor 1 precursor (Toll/interleukin-1| receptor-like protein) (TIL) (CD281 antigen) Length = 795 Score = 30.0 bits (66), Expect = 3.9 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +2 Query: 131 KHVRIQRLPLVMPKQRKFHRWLDSKVRNPFSFKLSIVSLRLVSRGISSMPRLL 289 +HV + L +V P +R+F LD V +LS + L +G S R L Sbjct: 188 RHVSTETLHIVFPSKREFRFLLDVSVSTTIGLELSNIKCVLEDQGCSYFLRAL 240
>BAN_ARATH (Q9SEV0) Leucoanthocyanidin reductase (EC 1.3.1.77) (LAR) (Protein| BANYULS) (Anthocyanin spotted testa) (ast) Length = 340 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = -2 Query: 498 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPV 352 +V+V D+A AH+ E +A+GRY ++ + + YP++ V Sbjct: 241 FVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYPKYNV 289
>PMBA_BUCAP (Q8KA30) Protein pmbA homolog| Length = 447 Score = 29.3 bits (64), Expect = 6.6 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Frame = +2 Query: 170 KQRKFHRWLDSKVRNPFSFKLSIVSLRLVSRGISSMPRLLILS--FDTW*IVAKGASSAH 343 K+R F WL+ + NP K + S S G+S+ R +I + +TW + A Sbjct: 278 KKRIFPEWLNIE-ENPH-IKKGLGSKPFDSEGVSTTIRSIIKNGILETWLLNTYNARKLG 335 Query: 344 LSGTGNSGYIS 376 L+ TG+SG IS Sbjct: 336 LTTTGHSGGIS 346
>POL_FENV1 (P31792) Pol polyprotein [Contains: Reverse| transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] (Fragment) Length = 1046 Score = 29.3 bits (64), Expect = 6.6 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 Query: 402 HSDLVKIIHEMYPEFPVPDKCADDAPFATIYQVSKDKIRSLGM 274 H KI+ E++P F +P D A + QVS+ R+LG+ Sbjct: 804 HMVAKKILEEIFPRFGLPKVIGSDNGPAFVSQVSQGLARTLGI 846
>ENGC_STAES (Q8CSV8) Probable GTPase engC (EC 3.6.1.-)| Length = 291 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = -1 Query: 319 HNLPSVKGQDKKSGHGADSPGDEPQGDYREFERERISDF*VE 194 H V+ D+K G+ AD+PG D+ E+E++ DF ++ Sbjct: 197 HTTRHVELYDRKGGYIADTPGFSAL-DFNHIEKEQLKDFFID 237
>ENGC_STAEQ (Q5HPX0) Probable GTPase engC (EC 3.6.1.-)| Length = 291 Score = 29.3 bits (64), Expect = 6.6 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = -1 Query: 319 HNLPSVKGQDKKSGHGADSPGDEPQGDYREFERERISDF*VE 194 H V+ D+K G+ AD+PG D+ E+E++ DF ++ Sbjct: 197 HTTRHVELYDRKGGYIADTPGFSAL-DFNHIEKEQLKDFFID 237 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,801,019 Number of Sequences: 219361 Number of extensions: 1638946 Number of successful extensions: 4337 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4232 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4336 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
