>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score =  129 bits (323), Expect = 7e-30
 Identities = 67/130 (51%), Positives = 79/130 (60%), Gaps = 7/130 (5%)
 Frame = -3

Query: 530 NAGPRFFNARLKEVVARLRVALPEAAFTYVDLYAAMYKLMSEAKKFGFGDPLRVCCGYGG 351
           N   + FN +LKE+VA+LR  LP A F +VD+Y+  Y L SE +K GF  PL  CCGY G
Sbjct: 251 NEVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGFEFPLITCCGY-G 309

Query: 350 GQYNFDKNIRCGDPVLGGK-------SCVDPSKSVSWDGVHLTEAAYKFIFDQIVDGALS 192
           G+YNF     CGD V           SC  PS  V+WDG H TEAA ++ FDQI  GA S
Sbjct: 310 GKYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQISTGAFS 369

Query: 191 DPPVPLRRAC 162
           DPPVPL  AC
Sbjct: 370 DPPVPLNMAC 379

>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score =  102 bits (253), Expect = 9e-22
 Identities = 54/111 (48%), Positives = 69/111 (62%), Gaps = 7/111 (6%)
 Frame = -3

Query: 512 FNARLKEVVARLRVALPEAAFTYVDLYAAMYKLMSEAKKFGFGDPLRVCCGYGGGQYNFD 333
           FN  LK+ V  LR +L EAA TYVD+Y+  ++L   A+  GF   L  CCG+ GG+YN++
Sbjct: 255 FNHALKQAVIELRSSLSEAAITYVDVYSLKHELFVHAQGHGFKGSLVSCCGH-GGKYNYN 313

Query: 332 KNIRC-------GDPVLGGKSCVDPSKSVSWDGVHLTEAAYKFIFDQIVDG 201
           K I C       G  V  GK C +P K+V WDGVH T+AA KFIFD+I  G
Sbjct: 314 KGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKFIFDKIAPG 364

>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 30/103 (29%), Positives = 49/103 (47%)
 Frame = -3

Query: 530 NAGPRFFNARLKEVVARLRVALPEAAFTYVDLYAAMYKLMSEAKKFGFGDPLRVCCGYGG 351
           N   + FN++L  ++ +L   LP + F Y+D+Y  + +++     +GF +  + CC  G 
Sbjct: 424 NYASQLFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTG- 482

Query: 350 GQYNFDKNIRCGDPVLGGKSCVDPSKSVSWDGVHLTEAAYKFI 222
                     C       K C + S  + WDGVH T+ AYK I
Sbjct: 483 ---LLSAGALCKKST--SKICPNTSSYLFWDGVHPTQRAYKTI 520

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
 Frame = -3

Query: 530 NAGPRFFNARLKEVVARLRVALPEAAFTYVDLYAAMYKLMSEAKKFGFGDPLRVCCGYG- 354
           N   + FN++L  ++ +L   LP +   Y D+Y+   K++   + +GF +  + CC  G 
Sbjct: 341 NYAAQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGL 400

Query: 353 --GGQYNFDKNIRCGDPVLGGKSCVDPSKSVSWDGVHLTEAAYK 228
             GG +  ++ +         K+  + S  + WDG+H ++ AY+
Sbjct: 401 TKGGVFCKERTL---------KNMSNASSYLFWDGLHPSQRAYE 435

>CI066_HUMAN (Q5T8R8) Protein C9orf66|
          Length = 295

 Score = 36.2 bits (82), Expect = 0.058
 Identities = 26/65 (40%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = -2

Query: 363 RVRRRPIQLRQEHPVWRSGPGGEVVRGPVQE-RELGWGALDRSGLQVYLRPDRGRRSLRP 187
           RVR R    R  HP WR+G GG   RGP  E     WG           R   G   LRP
Sbjct: 197 RVRARSSDGRLRHPAWRAGSGGRGGRGPSAELASRYWGR---------RRALPGAADLRP 247

Query: 186 SGAFA 172
            GA A
Sbjct: 248 KGARA 252

>HHIP_HUMAN (Q96QV1) Hedgehog-interacting protein precursor (HHIP) (HIP)|
          Length = 700

 Score = 32.3 bits (72), Expect = 0.83
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
 Frame = -3

Query: 509 NARLKEVVARLRVALPEAAFTYVDLYAAMYKLMSEAKKFGFGDPLRVCCGYGGGQYNFDK 330
           N +L ++V   R  +PE     V     +    S   + G+  P   CC   G + +F +
Sbjct: 576 NGKLYKIVDPKRPLMPEECRATVQPAQTLTSECSRLCRNGYCTPTGKCCCSPGWEGDFCR 635

Query: 329 NIRCGDPVLGGKSCVDPSKSVSWDGV----------HLTEAAYKFIFDQIVD 204
             +C      G  CV P+K +   G           ++       I DQI+D
Sbjct: 636 TAKCEPACRHGGVCVRPNKCLCKKGYLGPQCEQVDRNIRRVTRAGILDQIID 687

>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)|
          Length = 1285

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 286 THDFPPRTGSPHRMFLSKLYWPPPYPQHTRR 378
           T DF P  GS  R+    + WP P P H+ R
Sbjct: 501 TSDFNPNAGSDQRVVNGGVPWPSPCPSHSSR 531

>NOC2L_HUMAN (Q9Y3T9) Nucleolar complex protein 2 homolog (NOC2 protein homolog)|
          Length = 749

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 17/130 (13%)
 Frame = +1

Query: 100 RKKSYIRSLINEHHVHCPLPWQARRKGTGGSERAPSTIWSKINL*AASVKCTPS------ 261
           RKK   +S+ N  +VHC   W       G SE     ++    +    +K  P+      
Sbjct: 395 RKKETYQSVYNWQYVHCLFLWCRVLSTAGPSEALQPLVYPLAQVIIGCIKLIPTARFYPL 454

Query: 262 ------QLTLLDGSTHDFPPRTGSPHRMFLSKLYWPPPYPQHTRRGSPKP-NFLASL--- 411
                  LTLL GS+  F      P   F+ +++    + +   R S KP NF   L   
Sbjct: 455 RMHCIRALTLLSGSSGAF-----IPVLPFILEMFQQVDFNRKPGRMSSKPINFSVILKLS 509

Query: 412 -ISLYMAAYR 438
            ++L   AYR
Sbjct: 510 NVNLQEKAYR 519

>DNE23_AGRT5 (Q8U642) Error-prone DNA polymerase 3 (EC 2.7.7.7)|
          Length = 1087

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 31/109 (28%), Positives = 36/109 (33%)
 Frame = -2

Query: 390 FWGSSARVLRVRRRPIQLRQEHPVWRSGPGGEVVRGPVQERELGWGALDRSGLQVYLRPD 211
           F+    +V  VR  PIQ    HP  R   G E V  P  E E   G      L V L  +
Sbjct: 591 FYDLVVQVAIVRPGPIQGDMVHPYLRRREGKEAVEYPTPELEAVLG----KTLGVPLFQE 646

Query: 210 RGRRSLRPSGAFASGLPGQRAMNMMFIN*TADVGFFSDVRTPNKICNEY 64
              R       F  G   Q   +M     T  V  F D      + N Y
Sbjct: 647 SAMRVAMVCAGFTGGEADQLRKSMATFKFTGGVSQFKDKLVSGMVRNGY 695

>Y290_LAMBD (P03766) Hypothetical nin region protein ORF290|
          Length = 290

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -3

Query: 497 KEVVARLRVALPEAAFTYVDL-YAAMYKLMSEAKKFGFGDPLRVCCGYGGGQYNFD 333
           KE++ R R++L   A  Y +  Y A+Y+ M  AK+F  G      C   GGQ +FD
Sbjct: 230 KEIMYRGRMSLDGIAKMYSENDYQALYQDMVRAKRFDTGS-CSESCEIFGGQLDFD 284

>HHIP_MOUSE (Q7TN16) Hedgehog-interacting protein precursor (HHIP) (HIP)|
          Length = 700

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
 Frame = -3

Query: 509 NARLKEVVARLRVALPEAAFTYVDLYAAMYKLMSEAKKFGFGDPLRVCCGYGGGQYNFDK 330
           N +L ++V   R  +PE     V     +    S   + G+  P   CC   G + +F +
Sbjct: 576 NGKLYKIVDPKRPLMPEECRVTVQPAQPLTSDCSRLCRNGYYTPTGKCCCSPGWEGDFCR 635

Query: 329 NIRCGDPVLGGKSCVDPSKSVSWDGV----------HLTEAAYKFIFDQIVD 204
             +C      G  CV P+K +   G           ++       I DQI+D
Sbjct: 636 IAKCEPACRHGGVCVRPNKCLCKKGYLGPQCEQVDRNVRRVTRAGILDQIID 687

>TRUB_PROMM (P59881) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 320

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 258 WGALDRSGLQVYLRPDRGRRSLRPSGAFASGLPGQRA 148
           W  L+ + ++ YL P RGR   RP    A  + G+RA
Sbjct: 93  WPELNTAEIEAYLEPFRGRIQQRPPQVSAVHVQGERA 129

>DNE22_RHIME (Q92ZJ6) Error-prone DNA polymerase 2 (EC 2.7.7.7)|
          Length = 1087

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 32/109 (29%), Positives = 37/109 (33%)
 Frame = -2

Query: 390 FWGSSARVLRVRRRPIQLRQEHPVWRSGPGGEVVRGPVQERELGWGALDRSGLQVYLRPD 211
           F+    +V  VR  PIQ    HP  R   G E V  P  E E    A+    L V L  +
Sbjct: 591 FYDLVIQVAIVRPGPIQGDMVHPYLRRREGKEKVEYPTPELE----AVLHKTLGVPLFQE 646

Query: 210 RGRRSLRPSGAFASGLPGQRAMNMMFIN*TADVGFFSDVRTPNKICNEY 64
              R       F  G   Q   +M     T  V  F D      I N Y
Sbjct: 647 SAMRVAMVCAGFTGGEADQLRKSMATFKFTGGVSRFKDKLVNGMIRNGY 695

>DNE22_AGRT5 (Q8UKK2) Error-prone DNA polymerase 2 (EC 2.7.7.7)|
          Length = 1085

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 31/109 (28%), Positives = 36/109 (33%)
 Frame = -2

Query: 390 FWGSSARVLRVRRRPIQLRQEHPVWRSGPGGEVVRGPVQERELGWGALDRSGLQVYLRPD 211
           F+    +V  VR  PIQ    HP  R   G E V  P  E E   G      L V L  +
Sbjct: 591 FYDLVVQVAIVRPGPIQGDMVHPYLRRREGKEPVEYPTPELEAVLG----KTLGVPLFQE 646

Query: 210 RGRRSLRPSGAFASGLPGQRAMNMMFIN*TADVGFFSDVRTPNKICNEY 64
              R       F  G   Q   +M     T  V  F D      + N Y
Sbjct: 647 SAMRVAMVCAGFTGGEADQLRKSMATFKFTGGVSRFKDKLVSGMVKNGY 695

>T240L_HUMAN (Q71F56) Thyroid hormone receptor-associated protein 2 (Thyroid|
            hormone receptor-associated protein complex 240 kDa
            component-like)
          Length = 2210

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = +1

Query: 97   VRKKSYIRSLINEHHVHCPLPWQARRK----GTGGSERAPSTI 213
            ++KK   R+  N  HV  PL WQ   K    GT GSE +P  +
Sbjct: 1338 IQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPL 1380

>REP1_YEAST (P03871) Trans-acting factor B (REP1) (Protein Baker)|
          Length = 373

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 20/49 (40%), Positives = 24/49 (48%)
 Frame = -2

Query: 210 RGRRSLRPSGAFASGLPGQRAMNMMFIN*TADVGFFSDVRTPNKICNEY 64
           RG+   RP G F       R M   F+N T    FFS +R  NKI +EY
Sbjct: 123 RGKGIRRPKGVFF------RYMESPFVN-TKVTAFFSYLRDYNKIASEY 164

>RIP_RAT (Q4G2Y1) RPA-interacting protein|
          Length = 219

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 91  TDVRKKSYIRSLINEHHVHCP-LPWQARRKGTGGSERAPSTIWS 219
           T+ + ++ +   +NEH  HCP +P       TGG+E  PS + S
Sbjct: 168 TEQKLRACLEGNVNEHSAHCPHIP---EFSVTGGTEEKPSLLMS 208

>T240L_MOUSE (Q6JPI3) Thyroid hormone receptor-associated protein 2 (Thyroid|
            hormone receptor-associated protein complex 240 kDa
            component-like)
          Length = 2207

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = +1

Query: 97   VRKKSYIRSLINEHHVHCPLPWQARRK----GTGGSERAPSTI 213
            ++KK   R+  N  HV  PL WQ   K    GT GSE +P  +
Sbjct: 1337 IQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPL 1379

>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +1

Query: 280 GSTHDFPPRTGSPHRMFLSKLYWPPPYPQHTRRGSPKPN 396
           GS H  PP   SPH +    L   PP P H   G P P+
Sbjct: 420 GSGHPLPP--ASPHHV--PPLQQQPPPPPHVSAGGPPPS 454

>STK19_HUMAN (P49842) Serine/threonine-protein kinase 19 (EC 2.7.11.1) (Protein|
           RP1) (Protein G11)
          Length = 368

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 216 PDRGRRSLRPSGAFASGLPGQ 154
           P RGRR  RP G  A G PG+
Sbjct: 59  PIRGRRGARPGGGDAGGTPGE 79


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,171,547
Number of Sequences: 219361
Number of extensions: 1775172
Number of successful extensions: 5471
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5463
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)