ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK119619.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
2dbj|AK104751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
3dbj|AK104621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
4dbj|AK070684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 234 2e-58
6gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare str... 234 2e-58
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
8dbj|AK073387.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 8e-55
9ref|NM_194612.1| Oryza sativa (japonica cultivar-group) putative... 153 6e-34
10dbj|AK110804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 6e-34
11gb|AY108108.1| Zea mays PCO072542 mRNA sequence 153 6e-34
12gb|AY108047.1| Zea mays PCO103710 mRNA sequence 133 6e-28
13gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
14gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, c... 82 2e-12
15dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 82 2e-12
17gb|AF236109.1|AF236109 Phaseolus vulgaris putative purple acid p... 76 1e-10
18gb|AC117411.3| Homo sapiens 3 BAC RP11-55O2 (Roswell Park Cancer... 42 1.6
19gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome... 42 1.6
20gb|AF236107.1|AF236107 Ipomoea batatas putative purple acid phos... 42 1.6
21gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map M... 40 6.4
22gb|AY757038.1| Macrohasseltia macroterantha trnL-trnF intergenic... 40 6.4
23gb|AY756988.1| Azara salicifolia trnL-trnF intergenic spacer, pa... 40 6.4
24gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complet... 40 6.4
25emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chr... 40 6.4
26gb|AC114770.4| Homo sapiens BAC clone RP11-422D16 from 4, comple... 40 6.4
27gb|AC152401.6| Mus musculus chromosome 3, clone RP23-287A2, comp... 40 6.4
28gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8... 40 6.4
29gb|AC018867.5| Homo sapiens BAC clone RP11-66C4 from 2, complete... 40 6.4
30dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.4
31emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in... 40 6.4
32emb|CT823560.2| Human DNA sequence from clone XX-HCC1954_31G13, ... 40 6.4
33gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complet... 40 6.4
34dbj|AP003353.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.4

>dbj|AK119619.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H01, full
            insert sequence
          Length = 1198

 Score =  317 bits (160), Expect = 2e-83
 Identities = 256/288 (88%)
 Strand = Plus / Minus

                                                                        
Query: 186  cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 245
            |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 1074 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 1015

                                                                        
Query: 246  tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 305
            |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 1014 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 955

                                                                        
Query: 306  tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 365
            |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 954  tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 895

                                                                        
Query: 366  tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgttt 425
             ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| |
Sbjct: 894  aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtct 835

                                                            
Query: 426  ctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaag 473
            ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 834  ctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaag 787



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>dbj|AK104751.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F06, full
            insert sequence
          Length = 1187

 Score =  317 bits (160), Expect = 2e-83
 Identities = 256/288 (88%)
 Strand = Plus / Minus

                                                                        
Query: 186  cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 245
            |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 1063 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 1004

                                                                        
Query: 246  tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 305
            |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 1003 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 944

                                                                        
Query: 306  tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 365
            |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 943  tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 884

                                                                        
Query: 366  tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgttt 425
             ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| |
Sbjct: 883  aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtct 824

                                                            
Query: 426  ctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaag 473
            ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 823  ctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaag 776



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>dbj|AK104621.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G08, full
            insert sequence
          Length = 1187

 Score =  317 bits (160), Expect = 2e-83
 Identities = 256/288 (88%)
 Strand = Plus / Minus

                                                                        
Query: 186  cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 245
            |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 1063 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 1004

                                                                        
Query: 246  tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 305
            |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 1003 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 944

                                                                        
Query: 306  tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 365
            |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 943  tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 884

                                                                        
Query: 366  tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgttt 425
             ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| |
Sbjct: 883  aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtct 824

                                                            
Query: 426  ctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaag 473
            ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 823  ctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaag 776



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>dbj|AK070684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062L13, full
            insert sequence
          Length = 1399

 Score =  317 bits (160), Expect = 2e-83
 Identities = 256/288 (88%)
 Strand = Plus / Minus

                                                                        
Query: 186  cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 245
            |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 1088 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 1029

                                                                        
Query: 246  tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 305
            |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 1028 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 969

                                                                        
Query: 306  tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 365
            |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 968  tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 909

                                                                        
Query: 366  tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgttt 425
             ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| |
Sbjct: 908  aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtct 849

                                                            
Query: 426  ctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaag 473
            ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 848  ctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaag 801



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  234 bits (118), Expect = 2e-58
 Identities = 208/238 (87%)
 Strand = Plus / Minus

                                                                           
Query: 186     cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 245
               |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 7294468 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 7294409

                                                                           
Query: 246     tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 305
               |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 7294408 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 7294349

                                                                           
Query: 306     tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 365
               |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 7294348 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 7294289

                                                                         
Query: 366     tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgt 423
                ||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 7294288 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgt 7294231



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                     
Query: 420     ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaag 473
               |||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 7294117 ctgtctctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaag 7294064



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>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0060E18, from chromosome 3, complete sequence
          Length = 147983

 Score =  234 bits (118), Expect = 2e-58
 Identities = 208/238 (87%)
 Strand = Plus / Minus

                                                                         
Query: 186   cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 245
             |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 45724 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 45665

                                                                         
Query: 246   tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 305
             |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 45664 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 45605

                                                                         
Query: 306   tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 365
             |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 45604 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 45545

                                                                       
Query: 366   tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgt 423
              ||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 45544 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgt 45487



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                   
Query: 420   ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaag 473
             |||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 45373 ctgtctctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaag 45320



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  234 bits (118), Expect = 2e-58
 Identities = 208/238 (87%)
 Strand = Plus / Minus

                                                                           
Query: 186     cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 245
               |||||| || |||||| |||  |||||||||||| || ||||| ||||| |  | |||||
Sbjct: 7292363 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 7292304

                                                                           
Query: 246     tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 305
               |  |||||||  || ||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 7292303 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 7292244

                                                                           
Query: 306     tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 365
               |||||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||| 
Sbjct: 7292243 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 7292184

                                                                         
Query: 366     tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgt 423
                ||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 7292183 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgt 7292126



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                     
Query: 420     ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaag 473
               |||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 7292012 ctgtctctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaag 7291959



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>dbj|AK073387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043K11, full
            insert sequence
          Length = 2343

 Score =  222 bits (112), Expect = 8e-55
 Identities = 190/216 (87%)
 Strand = Plus / Plus

                                                                        
Query: 208  tggagggctggaagtggtttgttttgcgcgaggtccactcatacaagactttaccagaaa 267
            |||||||||||| || ||||| ||||| |  | ||||||  |||||||  || |||||||
Sbjct: 1633 tggagggctggaggtagtttgctttgctcttgctccacttgtacaagatgttcccagaaa 1692

                                                                        
Query: 268  catcataaaagatgaagtcagcttggtccttgtttagctggagggacatgaacccttgcc 327
            ||||| |||| ||||||||||||||||||| ||||| ||||||||||||||||||||| |
Sbjct: 1693 catcacaaaatatgaagtcagcttggtcctggtttatctggagggacatgaacccttgtc 1752

                                                                        
Query: 328  catcataaaagaactggagcttatcatcatttggctggtagactcccctccatgcttttg 387
            |||| |||||||||||||||||||||  |||||||||  ||||||| |||||||||||||
Sbjct: 1753 catcgtaaaagaactggagcttatcagaatttggctgcaagactcctctccatgcttttg 1812

                                                
Query: 388  aaccgcctccactagtgaagtattggattggactgt 423
            |||| |||||||| |||||||||||||| |||||||
Sbjct: 1813 aaccacctccacttgtgaagtattggataggactgt 1848



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                           
Query: 443  caggcagtggtcatgcccattgatgtagaag 473
            |||||||||||| ||||||||||||||||||
Sbjct: 1870 caggcagtggtcgtgcccattgatgtagaag 1900



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>ref|NM_194612.1| Oryza sativa (japonica cultivar-group) putative purple acid
           phosphatase (OSJNBa0023I19.10), mRNA
          Length = 1008

 Score =  153 bits (77), Expect = 6e-34
 Identities = 140/161 (86%)
 Strand = Plus / Minus

                                                                       
Query: 312 gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 371
           |||| ||||||||| |||||||| |||||||||||||| || || ||| | ||  | |  
Sbjct: 878 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 819

                                                                       
Query: 372 cccctccatgcttttgaaccgcctccactagtgaagtattggattggactgtttctgctg 431
           || |||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 818 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactgtttctgctg 759

                                                    
Query: 432 ctaatgtgttccaggcagtggtcatgcccattgatgtagaa 472
           || ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 758 ctgatgtgctccaggcagtgatcatgcccattgatgtagaa 718



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>dbj|AK110804.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-E10, full
           insert sequence
          Length = 1195

 Score =  153 bits (77), Expect = 6e-34
 Identities = 140/161 (86%)
 Strand = Plus / Minus

                                                                       
Query: 312 gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 371
           |||| ||||||||| |||||||| |||||||||||||| || || ||| | ||  | |  
Sbjct: 885 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 826

                                                                       
Query: 372 cccctccatgcttttgaaccgcctccactagtgaagtattggattggactgtttctgctg 431
           || |||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 825 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactgtttctgctg 766

                                                    
Query: 432 ctaatgtgttccaggcagtggtcatgcccattgatgtagaa 472
           || ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 765 ctgatgtgctccaggcagtgatcatgcccattgatgtagaa 725



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>gb|AY108108.1| Zea mays PCO072542 mRNA sequence
          Length = 1591

 Score =  153 bits (77), Expect = 6e-34
 Identities = 170/201 (84%)
 Strand = Plus / Minus

                                                                        
Query: 273  taaaagatgaagtcagcttggtccttgtttagctggagggacatgaacccttgcccatca 332
            |||||||| |||| ||| ||||| | ||| |||||||||||||||||||||||||| || 
Sbjct: 1214 taaaagataaagtgagcctggtcttggttcagctggagggacatgaacccttgcccgtcg 1155

                                                                        
Query: 333  taaaagaactggagcttatcatcatttggctggtagactcccctccatgcttttgaaccg 392
            || |||||  ||||||| || |  ||||| ||| ||||||| |||||||| || ||||||
Sbjct: 1154 tagaagaatcggagcttgtccttgtttggatggaagactcctctccatgccttggaaccg 1095

                                                                        
Query: 393  cctccactagtgaagtattggattggactgtttctgctgctaatgtgttccaggcagtgg 452
            ||||| || ||||| || |||| |||||||| ||||||||||||||| ||||| ||||| 
Sbjct: 1094 cctccgctcgtgaaatactggagtggactgtctctgctgctaatgtgctccagacagtga 1035

                                 
Query: 453  tcatgcccattgatgtagaag 473
            || || |||||||||||||||
Sbjct: 1034 tcgtgtccattgatgtagaag 1014



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>gb|AY108047.1| Zea mays PCO103710 mRNA sequence
          Length = 1513

 Score =  133 bits (67), Expect = 6e-28
 Identities = 145/171 (84%)
 Strand = Plus / Minus

                                                                        
Query: 302  tagctggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttgg 361
            |||||||||||||||||| |||||||| || || ||||||| ||| | ||| ||  | ||
Sbjct: 1039 tagctggagggacatgaagccttgcccgtcgtagaagaacttgaggtcatcttcggtggg 980

                                                                        
Query: 362  ctggtagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggact 421
             |  |  ||||| |||||||| || ||||||||||| || |||||||| |||||||| ||
Sbjct: 979  gttctgcactcctctccatgccttggaaccgcctccgcttgtgaagtactggattgggct 920

                                                               
Query: 422  gtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaa 472
            || ||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 919  gtctctgctgctgatgtgttccaggcagtggtcatgcccgttgatgtagaa 869



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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                    
Query: 420     ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaa 472
               |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1063495 ctgtttctgctgctgatgtgctccaggcagtgatcatgcccattgatgtagaa 1063443



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                           
Query: 312     gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 371
               |||| ||||||||| |||||||| |||||||||||||| || || ||| | ||  | |  
Sbjct: 1063682 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 1063623

                                                                  
Query: 372     cccctccatgcttttgaaccgcctccactagtgaagtattggattggactg 422
               || |||||||| ||||| |||||||||||||||||||| || |||||||||
Sbjct: 1063622 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactg 1063572



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>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence
          Length = 157450

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                  
Query: 420   ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaa 472
             |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 60948 ctgtttctgctgctgatgtgctccaggcagtgatcatgcccattgatgtagaa 60896



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                         
Query: 312   gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 371
             |||| ||||||||| |||||||| |||||||||||||| || || ||| | ||  | |  
Sbjct: 61135 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 61076

                                                                
Query: 372   cccctccatgcttttgaaccgcctccactagtgaagtattggattggactg 422
             || |||||||| ||||| |||||||||||||||||||| || |||||||||
Sbjct: 61075 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactg 61025



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                    
Query: 420     ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaa 472
               |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1063495 ctgtttctgctgctgatgtgctccaggcagtgatcatgcccattgatgtagaa 1063443



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                           
Query: 312     gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 371
               |||| ||||||||| |||||||| |||||||||||||| || || ||| | ||  | |  
Sbjct: 1063682 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 1063623

                                                                  
Query: 372     cccctccatgcttttgaaccgcctccactagtgaagtattggattggactg 422
               || |||||||| ||||| |||||||||||||||||||| || |||||||||
Sbjct: 1063622 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactg 1063572



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                    
Query: 420     ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaa 472
               |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1063492 ctgtttctgctgctgatgtgctccaggcagtgatcatgcccattgatgtagaa 1063440



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                           
Query: 312     gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 371
               |||| ||||||||| |||||||| |||||||||||||| || || ||| | ||  | |  
Sbjct: 1063679 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 1063620

                                                                  
Query: 372     cccctccatgcttttgaaccgcctccactagtgaagtattggattggactg 422
               || |||||||| ||||| |||||||||||||||||||| || |||||||||
Sbjct: 1063619 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactg 1063569



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>gb|AF236109.1|AF236109 Phaseolus vulgaris putative purple acid phosphatase (PAP) mRNA,
           complete cds
          Length = 996

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 376 tccatgcttttgaaccgcctccactagtgaagtattggattggactgtttctgctgctaa 435
           ||||||| |||||||| || ||||| || ||| |||||||| | ||| || |||| || |
Sbjct: 805 tccatgcctttgaacctccaccactggttaagaattggatttggctgcttgtgctactta 746

                                             
Query: 436 tgtgttccaggcagtggtcatgcccattgatgta 469
           ||||||||| |||||||||||||||||| |||||
Sbjct: 745 tgtgttccaagcagtggtcatgcccattaatgta 712



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>gb|AC117411.3| Homo sapiens 3 BAC RP11-55O2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 124524

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 24     tttattgtagacaattcacat 44
              |||||||||||||||||||||
Sbjct: 120370 tttattgtagacaattcacat 120390



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>gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome 14, complete sequence
          Length = 202303

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 420   ctgtttctgctgctaatgtgttcca 444
             |||||| ||||||||||||||||||
Sbjct: 20173 ctgtttttgctgctaatgtgttcca 20149



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>gb|AF236107.1|AF236107 Ipomoea batatas putative purple acid phosphatase precursor (PAP)
           mRNA, complete cds
          Length = 939

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 312 gacatgaacccttgcccatcataaaagaa 340
           |||||||| |||||||||||||| |||||
Sbjct: 890 gacatgaatccttgcccatcatagaagaa 862



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>gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map MAP_LOC, complete
             sequence
          Length = 73587

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   cacattcaattttttcacaa 142
             ||||||||||||||||||||
Sbjct: 38746 cacattcaattttttcacaa 38727



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>gb|AY757038.1| Macrohasseltia macroterantha trnL-trnF intergenic spacer, partial
           sequence; chloroplast
          Length = 307

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 cattcaattttttcacaaat 144
           ||||||||||||||||||||
Sbjct: 60  cattcaattttttcacaaat 79



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>gb|AY756988.1| Azara salicifolia trnL-trnF intergenic spacer, partial sequence;
           chloroplast
          Length = 111

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 cattcaattttttcacaaat 144
           ||||||||||||||||||||
Sbjct: 63  cattcaattttttcacaaat 82



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>gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complete sequence
          Length = 188205

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 178    tgcatgtccctcattctgcagtga 201
              ||||||||||||||||||| ||||
Sbjct: 122569 tgcatgtccctcattctgctgtga 122546



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>emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chromosome 9, complete
             sequence
          Length = 130718

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    caattcacatccagttcaatattt 58
             ||||||||||||||| ||||||||
Sbjct: 89901 caattcacatccagtgcaatattt 89878



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>gb|AC114770.4| Homo sapiens BAC clone RP11-422D16 from 4, complete sequence
          Length = 127953

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 197    agtgacataaatggagggctggaa 220
              ||||||| ||||||||||||||||
Sbjct: 117361 agtgacagaaatggagggctggaa 117384



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>gb|AC152401.6| Mus musculus chromosome 3, clone RP23-287A2, complete sequence
          Length = 217151

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 263    agaaacatcataaaagatgaagtcagct 290
              ||||||| ||||||| ||||||||||||
Sbjct: 177012 agaaacaacataaaacatgaagtcagct 177039



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>gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8, complete sequence
          Length = 186751

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    ttctgctgctaatgtgttcc 443
              ||||||||||||||||||||
Sbjct: 159102 ttctgctgctaatgtgttcc 159083



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>gb|AC018867.5| Homo sapiens BAC clone RP11-66C4 from 2, complete sequence
          Length = 78121

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     ccatactgatctctgctcct 24
             ||||||||||||||||||||
Sbjct: 62741 ccatactgatctctgctcct 62722



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>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete
              sequence
          Length = 190267

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    gggctggaagtggtttgttt 231
              ||||||||||||||||||||
Sbjct: 137014 gggctggaagtggtttgttt 136995



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>emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in linkage group 22,
              complete sequence
          Length = 209223

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    atggagggctggaagtggtt 226
              ||||||||||||||||||||
Sbjct: 125635 atggagggctggaagtggtt 125616



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>emb|CT823560.2| Human DNA sequence from clone XX-HCC1954_31G13, complete sequence
          Length = 134950

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   ttctgctgctaatgtgttcc 443
             ||||||||||||||||||||
Sbjct: 83657 ttctgctgctaatgtgttcc 83638



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>gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complete sequence
          Length = 210223

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 263  agaaacatcataaaagatgaagtcagct 290
            ||||||| ||||||| ||||||||||||
Sbjct: 9356 agaaacaacataaaacatgaagtcagct 9383



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>dbj|AP003353.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1491A8
          Length = 159490

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   ttctgctgctaatgtgttcc 443
             ||||||||||||||||||||
Sbjct: 35833 ttctgctgctaatgtgttcc 35814


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,615,235
Number of Sequences: 3902068
Number of extensions: 4615235
Number of successful extensions: 89234
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89049
Number of HSP's gapped (non-prelim): 185
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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