ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome... 84 4e-13
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 84 4e-13
4gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 76 1e-10
5gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P1... 64 4e-07
6dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
7dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
8dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
9dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.088
10gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
11emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p1... 42 1.4
12gb|AC099654.5| Homo sapiens BAC clone RP11-1217F2 from 7, comple... 42 1.4
13gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete se... 42 1.4
14emb|BX294123.12| Zebrafish DNA sequence from clone DKEYP-16G7 in... 42 1.4
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
16gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein... 42 1.4
17emb|BX088699.4| Zebrafish DNA sequence from clone CH211-192K19 i... 42 1.4
18gb|AY107519.1| Zea mays PCO078033 mRNA sequence 42 1.4
19gb|AC156998.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
20dbj|AP004972.1| Lotus japonicus genomic DNA, chromosome 3, clone... 42 1.4
21emb|AL935063.7| Zebrafish DNA sequence from clone CH211-165P5, c... 42 1.4
22ref|XM_629038.1| Dictyostelium discoideum hypothetical protein (... 40 5.4
23gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
24gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
25gb|AC004920.2| Homo sapiens PAC clone RP5-898O18 from 7, complet... 40 5.4
26gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete seq... 40 5.4
27gb|AC139526.22| Medicago truncatula clone mth2-9b23, complete se... 40 5.4
28gb|AC148239.7| Medicago truncatula clone mth2-5d7, complete sequ... 40 5.4
29gb|AC146865.11| Medicago truncatula clone mth2-36m14, complete s... 40 5.4
30emb|AL449188.2| Human DNA sequence from clone RP11-460G6 on chro... 40 5.4
31gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, com... 40 5.4
32emb|AL669892.11| Mouse DNA sequence from clone RP23-31K14 on chr... 40 5.4
33gb|AC149518.2| Xenopus tropicalis clone CH216-59A18, complete se... 40 5.4
34gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete ... 40 5.4
35gb|AC069540.6| Homo sapiens chromosome 10 clone RP11-344L13, com... 40 5.4
36gb|AC145871.4| Pan troglodytes BAC clone RP43-6N15 from chromoso... 40 5.4
37gb|AC011390.3| Homo sapiens chromosome 5 clone CTB-176I15, compl... 40 5.4
38gb|AC093514.2| Homo sapiens chromosome 16 clone CTD-2517O22, com... 40 5.4
39gb|AC094022.3| Homo sapiens chromosome 1 clone RP11-88N11, compl... 40 5.4
40gb|DQ267495.1| Uncultured delta proteobacterium DeepAnt-1F12 fos... 40 5.4
41dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
42gb|L09217.1|ICTORDA Ictalurus punctatus olfactory receptor 1 mRN... 40 5.4
43gb|AC026462.5| Homo sapiens chromosome 16 clone RP11-297L17, com... 40 5.4
44gb|AC091971.4| Homo sapiens chromosome 5 clone RP11-511F22, comp... 40 5.4
45emb|AJ243213.1|HSA243213 Homo sapiens partial 5-HT4 receptor gen... 40 5.4
46gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
47emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.4
48emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-49E10 ... 40 5.4
49dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 5.4
50dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 5.4
51emb|AL824707.7| Mouse DNA sequence from clone RP23-95O1 on chrom... 40 5.4
52emb|AL669845.9| Mouse DNA sequence from clone RP23-43C21 on chro... 40 5.4 
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05
              map C53961S, complete sequence
          Length = 175121

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                          
Query: 297    gggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaat 356
              ||||||||||||||||| ||||||||||| |||||||||||||  || ||||||||||| 
Sbjct: 140247 gggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactgaag 140306

                            
Query: 357    cctgccttgatgaa 370
              ||||| ||| ||||
Sbjct: 140307 cctgctttgctgaa 140320



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 54/62 (87%), Gaps = 1/62 (1%)
 Strand = Plus / Plus

                                                                          
Query: 300    tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 359
              ||||||||||| | | |||||||||| |||| ||||||||  |||||||||||||| |||
Sbjct: 138364 tagacctcaaatatagctcgagctcccagtt-cttcacaatcttatagtcactgaagcct 138422

                
Query: 360    gc 361
              ||
Sbjct: 138423 gc 138424



 Score = 46.1 bits (23), Expect = 0.088
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                          
Query: 295    acgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactga 354
              |||| ||||||||||||||| |||||||||  | ||| |||||||  ||||||| | |||
Sbjct: 115954 acggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattga 116013

                     
Query: 355    atcctgc 361
              | |||||
Sbjct: 116014 agcctgc 116020
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 297      gggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaat 356
                ||||||||||||||||| ||||||||||| |||||||||||||  || ||||||||||| 
Sbjct: 11353889 gggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactgaag 11353948

                              
Query: 357      cctgccttgatgaa 370
                ||||| ||| ||||
Sbjct: 11353949 cctgctttgctgaa 11353962



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                            
Query: 300      tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 359
                |||||||| |||||| ||||||| || |||||||||||||  ||||||||||||||||||
Sbjct: 11549317 tagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatcct 11549376

                  
Query: 360      gc 361
                ||
Sbjct: 11549377 gc 11549378



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 293      tcacgggtagacctcaaagacacctcgagctcctagtttcttca 336
                ||||||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 11485511 tcacgggtagacctcaatgacacatcgagctcctagtttgttca 11485468



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                            
Query: 300      tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 359
                |||||||| || || ||||||||||| ||  |||||||||  ||||||||| ||||||||
Sbjct: 11490631 tagacctcgaaaactcctcgagctccaagcatcttcacaatcttatagtcattgaatcct 11490690

                  
Query: 360      gc 361
                ||
Sbjct: 11490691 gc 11490692



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 54/62 (87%), Gaps = 1/62 (1%)
 Strand = Plus / Plus

                                                                            
Query: 300      tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 359
                ||||||||||| | | |||||||||| |||| ||||||||  |||||||||||||| |||
Sbjct: 11352006 tagacctcaaatatagctcgagctcccagtt-cttcacaatcttatagtcactgaagcct 11352064

                  
Query: 360      gc 361
                ||
Sbjct: 11352065 gc 11352066



 Score = 46.1 bits (23), Expect = 0.088
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 295      acgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactga 354
                |||| ||||||||||||||| |||||||||  | ||| |||||||  ||||||| | |||
Sbjct: 11329596 acggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattga 11329655

                       
Query: 355      atcctgc 361
                | |||||
Sbjct: 11329656 agcctgc 11329662



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 300      tagacctcaaagacacctcgagctcctagtttcttcacaa 339
                |||||||||||||  ||||||  |||||| ||||||||||
Sbjct: 11437244 tagacctcaaagatgcctcgaattcctagcttcttcacaa 11437283



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                           
Query: 291     tctcacgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtca 350
               ||||| || |||||||| || ||| |||||||||| || |||||  | |  |||||||||
Sbjct: 7137523 tctcatggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtca 7137582

                       
Query: 351     ctgaatcc 358
               ||||||||
Sbjct: 7137583 ctgaatcc 7137590
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 297      gggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaat 356
                ||||||||||||||||| ||||||||||| |||||||||||||  || ||||||||||| 
Sbjct: 11433078 gggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactgaag 11433137

                              
Query: 357      cctgccttgatgaa 370
                ||||| ||| ||||
Sbjct: 11433138 cctgctttgctgaa 11433151



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                            
Query: 300      tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 359
                |||||||| |||||| ||||||| || |||||||||||||  ||||||||||||||||||
Sbjct: 11628506 tagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatcct 11628565

                  
Query: 360      gc 361
                ||
Sbjct: 11628566 gc 11628567



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 293      tcacgggtagacctcaaagacacctcgagctcctagtttcttca 336
                ||||||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 11564700 tcacgggtagacctcaatgacacatcgagctcctagtttgttca 11564657



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                            
Query: 300      tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 359
                |||||||| || || ||||||||||| ||  |||||||||  ||||||||| ||||||||
Sbjct: 11569820 tagacctcgaaaactcctcgagctccaagcatcttcacaatcttatagtcattgaatcct 11569879

                  
Query: 360      gc 361
                ||
Sbjct: 11569880 gc 11569881



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 54/62 (87%), Gaps = 1/62 (1%)
 Strand = Plus / Plus

                                                                            
Query: 300      tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 359
                ||||||||||| | | |||||||||| |||| ||||||||  |||||||||||||| |||
Sbjct: 11431195 tagacctcaaatatagctcgagctcccagtt-cttcacaatcttatagtcactgaagcct 11431253

                  
Query: 360      gc 361
                ||
Sbjct: 11431254 gc 11431255



 Score = 46.1 bits (23), Expect = 0.088
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 295      acgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactga 354
                |||| ||||||||||||||| |||||||||  | ||| |||||||  ||||||| | |||
Sbjct: 11408785 acggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattga 11408844

                       
Query: 355      atcctgc 361
                | |||||
Sbjct: 11408845 agcctgc 11408851



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 300      tagacctcaaagacacctcgagctcctagtttcttcacaa 339
                |||||||||||||  ||||||  |||||| ||||||||||
Sbjct: 11516433 tagacctcaaagatgcctcgaattcctagcttcttcacaa 11516472



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                           
Query: 291     tctcacgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtca 350
               ||||| || |||||||| || ||| |||||||||| || |||||  | |  |||||||||
Sbjct: 7203494 tctcatggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtca 7203553

                       
Query: 351     ctgaatcc 358
               ||||||||
Sbjct: 7203554 ctgaatcc 7203561
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>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0005P21, complete sequence
          Length = 147381

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 300   tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 359
             |||||||| |||||| ||||||| || |||||||||||||  ||||||||||||||||||
Sbjct: 64471 tagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatcct 64412

               
Query: 360   gc 361
             ||
Sbjct: 64411 gc 64410



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                          
Query: 293    tcacgggtagacctcaaagacacctcgagctcctagtttcttca 336
              ||||||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 128277 tcacgggtagacctcaatgacacatcgagctcctagtttgttca 128320



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                          
Query: 300    tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 359
              |||||||| || || ||||||||||| ||  |||||||||  ||||||||| ||||||||
Sbjct: 123157 tagacctcgaaaactcctcgagctccaagcatcttcacaatcttatagtcattgaatcct 123098

                
Query: 360    gc 361
              ||
Sbjct: 123097 gc 123096
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>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence
          Length = 128418

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 293   tcacgggtagacctcaaagacacctcgagctcctagtttcttca 336
             ||||||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 14026 tcacgggtagacctcaatgacacatcgagctcctagtttgttca 14069



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 300  tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 359
            |||||||| || || ||||||||||| ||  |||||||||  ||||||||| ||||||||
Sbjct: 8906 tagacctcgaaaactcctcgagctccaagcatcttcacaatcttatagtcattgaatcct 8847

              
Query: 360  gc 361
            ||
Sbjct: 8846 gc 8845



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 300   tagacctcaaagacacctcgagctcctagtttcttcacaa 339
             |||||||||||||  ||||||  |||||| ||||||||||
Sbjct: 62293 tagacctcaaagatgcctcgaattcctagcttcttcacaa 62254
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>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full
            insert sequence
          Length = 1300

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 293  tcacgggtagacctcaaagacacctcgagctcctagtttcttca 336
            ||||||||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 1191 tcacgggtagacctcaatgacacatcgagctcctagtttgttca 1148
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>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full
            insert sequence
          Length = 1362

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 300  tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 359
            |||||||| || || ||||||||||| ||  |||||||||  ||||||||| ||||||||
Sbjct: 1150 tagacctcgaaaactcctcgagctccaagcatcttcacaatcttatagtcattgaatcct 1091

              
Query: 360  gc 361
            ||
Sbjct: 1090 gc 1089
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>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full
            insert sequence
          Length = 1264

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                        
Query: 300  tagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactgaatcct 359
            |||||||| || || ||||||||||| ||  |||||||||  ||||||||| ||||||||
Sbjct: 1155 tagacctcgaaaactcctcgagctccaagcatcttcacaatcttatagtcattgaatcct 1096

              
Query: 360  gc 361
            ||
Sbjct: 1095 gc 1094
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>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full
            insert sequence
          Length = 1262

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                        
Query: 295  acgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtcactga 354
            |||| ||||||||||||||| |||||||||  | ||| |||||||  ||||||| | |||
Sbjct: 1169 acggatagacctcaaagacagctcgagctctcaattttttcacaatcttatagttattga 1110

                   
Query: 355  atcctgc 361
            | |||||
Sbjct: 1109 agcctgc 1103
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>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01,
             complete sequence
          Length = 118799

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 196   atactccctccgatcctaattaattgacg 224
             |||||||||||| |||||| |||||||||
Sbjct: 42844 atactccctccgttcctaaataattgacg 42872
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>emb|CR962137.2| Medicago truncatula chromosome 5 clone mte1-10p15, COMPLETE SEQUENCE
          Length = 111128

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 193   ataatactccctccgatcctaatta 217
             |||||||||||||||||||| ||||
Sbjct: 49256 ataatactccctccgatccttatta 49232
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>gb|AC099654.5| Homo sapiens BAC clone RP11-1217F2 from 7, complete sequence
          Length = 149259

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 141    ggaaagtaagacaatttccat 161
              |||||||||||||||||||||
Sbjct: 143088 ggaaagtaagacaatttccat 143068
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>gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete sequence
          Length = 124554

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 194   taatactccctccgatcctaa 214
             |||||||||||||||||||||
Sbjct: 65303 taatactccctccgatcctaa 65323
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>emb|BX294123.12| Zebrafish DNA sequence from clone DKEYP-16G7 in linkage group 2,
             complete sequence
          Length = 168359

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   gtacagtattatcctccaaac 133
             |||||||||||||||||||||
Sbjct: 39765 gtacagtattatcctccaaac 39785
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 196      atactccctccgatcctaattaattgacg 224
                |||||||||||| |||||| |||||||||
Sbjct: 24760861 atactccctccgttcctaaataattgacg 24760889
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>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene,
             complete cds
          Length = 25080

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 194   taatactccctccgatcctaa 214
             |||||||||||||||||||||
Sbjct: 22023 taatactccctccgatcctaa 22003
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>emb|BX088699.4| Zebrafish DNA sequence from clone CH211-192K19 in linkage group 9,
             complete sequence
          Length = 112979

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     aaaagcacaccgagggcttta 27
             |||||||||||||||||||||
Sbjct: 61942 aaaagcacaccgagggcttta 61922
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>gb|AY107519.1| Zea mays PCO078033 mRNA sequence
          Length = 1299

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 297  gggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtc 349
            ||||||||||| | |||||| |||||||| | |||||| ||||| || |||||
Sbjct: 1105 gggtagacctcgatgacaccacgagctccgattttcttgacaaccttgtagtc 1053
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>gb|AC156998.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0086B08, complete sequence
          Length = 148274

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 196   atactccctccgatcctaattaattgacg 224
             |||||||||||| |||||| |||||||||
Sbjct: 87358 atactccctccgttcctaaataattgacg 87386
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>dbj|AP004972.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT41A07, TM0155a,
             complete sequence
          Length = 32123

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 193   ataatactccctccgatccta 213
             |||||||||||||||||||||
Sbjct: 27633 ataatactccctccgatccta 27613
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>emb|AL935063.7| Zebrafish DNA sequence from clone CH211-165P5, complete sequence
          Length = 141819

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   gtacagtattatcctccaaac 133
             |||||||||||||||||||||
Sbjct: 69231 gtacagtattatcctccaaac 69251
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>ref|XM_629038.1| Dictyostelium discoideum hypothetical protein (DDB0219883), partial
            mRNA
          Length = 4311

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  acaatattggatagagtttg 254
            ||||||||||||||||||||
Sbjct: 3149 acaatattggatagagtttg 3130
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>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                         
Query: 291   tctcacgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtca 350
             ||||| || |||||||| || ||| |||||||||| || |||||  | |  |||||||||
Sbjct: 45032 tctcatggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtca 44973

                     
Query: 351   ctgaatcc 358
             ||||||||
Sbjct: 44972 ctgaatcc 44965
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>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 291   tctcacgggtagacctcaaagacacctcgagctcctagtttcttcacaactttatagtca 350
             ||||| || |||||||| || ||| |||||||||| || |||||  | |  |||||||||
Sbjct: 50743 tctcatggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtca 50802

                     
Query: 351   ctgaatcc 358
             ||||||||
Sbjct: 50803 ctgaatcc 50810
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>gb|AC004920.2| Homo sapiens PAC clone RP5-898O18 from 7, complete sequence
          Length = 103421

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 acagtattatcctccaaaca 134
           ||||||||||||||||||||
Sbjct: 674 acagtattatcctccaaaca 693
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>gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete sequence
          Length = 111446

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   taatactccctccgatccta 213
             ||||||||||||||||||||
Sbjct: 22570 taatactccctccgatccta 22589
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>gb|AC139526.22| Medicago truncatula clone mth2-9b23, complete sequence
          Length = 141491

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   ataatactccctccgatcct 212
             ||||||||||||||||||||
Sbjct: 92417 ataatactccctccgatcct 92436
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>gb|AC148239.7| Medicago truncatula clone mth2-5d7, complete sequence
          Length = 103609

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   taatactccctccgatccta 213
             ||||||||||||||||||||
Sbjct: 37434 taatactccctccgatccta 37415
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>gb|AC146865.11| Medicago truncatula clone mth2-36m14, complete sequence
          Length = 128493

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aaattataatactccctccg 207
             ||||||||||||||||||||
Sbjct: 53937 aaattataatactccctccg 53956
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>emb|AL449188.2| Human DNA sequence from clone RP11-460G6 on chromosome Xq21.2-22.2,
           complete sequence
          Length = 64329

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 193 ataatactccctccgatcct 212
           ||||||||||||||||||||
Sbjct: 523 ataatactccctccgatcct 542
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>gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, complete sequence
          Length = 195633

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     agttttacagattggaaagt 61
              ||||||||||||||||||||
Sbjct: 115817 agttttacagattggaaagt 115836
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>emb|AL669892.11| Mouse DNA sequence from clone RP23-31K14 on chromosome 11 Contains a
              hepatitis A virus cellular receptor (Havcr) pseudogene, the
              Timd2 gene for T-cell immunoglobulin and mucin domain
              containing 2, a ribosomal protein L7 (Rpl7) pseudogene, the
              Havcr1 gene for hepatitis A virus cellular receptor 1 and a
              CpG island, complete sequence
          Length = 158979

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    ggcctcaggacaatattgga 245
              ||||||||||||||||||||
Sbjct: 157365 ggcctcaggacaatattgga 157384
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>gb|AC149518.2| Xenopus tropicalis clone CH216-59A18, complete sequence
          Length = 210140

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   aaacatatctgggaaagtaa 149
             ||||||||||||||||||||
Sbjct: 40779 aaacatatctgggaaagtaa 40760
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>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 196   atactccctccgatcctaattaattgacgcggcctc 231
             |||||||||||||||| | |||||||| || |||||
Sbjct: 69123 atactccctccgatccgagttaattgatgcagcctc 69088
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>gb|AC069540.6| Homo sapiens chromosome 10 clone RP11-344L13, complete sequence
          Length = 201182

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   tagtcactgaatcctgcctt 364
             ||||||||||||||||||||
Sbjct: 44024 tagtcactgaatcctgcctt 44005
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>gb|AC145871.4| Pan troglodytes BAC clone RP43-6N15 from chromosome 7, complete
             sequence
          Length = 230197

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   acagtattatcctccaaaca 134
             ||||||||||||||||||||
Sbjct: 75030 acagtattatcctccaaaca 75011
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>gb|AC011390.3| Homo sapiens chromosome 5 clone CTB-176I15, complete sequence
          Length = 56173

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   agattggaaagtaaccaaga 69
            ||||||||||||||||||||
Sbjct: 6805 agattggaaagtaaccaaga 6786
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>gb|AC093514.2| Homo sapiens chromosome 16 clone CTD-2517O22, complete sequence
          Length = 147330

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   attggatagagtttgcttca 259
             ||||||||||||||||||||
Sbjct: 37245 attggatagagtttgcttca 37226
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>gb|AC094022.3| Homo sapiens chromosome 1 clone RP11-88N11, complete sequence
          Length = 187268

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   gagtttgcttcaattaattc 267
             ||||||||||||||||||||
Sbjct: 17385 gagtttgcttcaattaattc 17404
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>gb|DQ267495.1| Uncultured delta proteobacterium DeepAnt-1F12 fosmid, complete sequence
          Length = 38421

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   tctctcacgggtagacctca 308
             ||||||||||||||||||||
Sbjct: 34161 tctctcacgggtagacctca 34180
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 191     ttataatactccctccgatc 210
               ||||||||||||||||||||
Sbjct: 2938768 ttataatactccctccgatc 2938749
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>gb|L09217.1|ICTORDA Ictalurus punctatus olfactory receptor 1 mRNA, complete cds
          Length = 1035

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 tgccttgatgaatatctcgc 378
           ||||||||||||||||||||
Sbjct: 690 tgccttgatgaatatctcgc 709
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>gb|AC026462.5| Homo sapiens chromosome 16 clone RP11-297L17, complete sequence
          Length = 179640

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   attggatagagtttgcttca 259
             ||||||||||||||||||||
Sbjct: 88965 attggatagagtttgcttca 88984
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>gb|AC091971.4| Homo sapiens chromosome 5 clone RP11-511F22, complete sequence
          Length = 70759

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    agattggaaagtaaccaaga 69
             ||||||||||||||||||||
Sbjct: 11877 agattggaaagtaaccaaga 11896
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>emb|AJ243213.1|HSA243213 Homo sapiens partial 5-HT4 receptor gene, exons 2 to 5
          Length = 130985

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    agattggaaagtaaccaaga 69
             ||||||||||||||||||||
Sbjct: 42836 agattggaaagtaaccaaga 42855
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 191     ttataatactccctccgatc 210
               ||||||||||||||||||||
Sbjct: 2938712 ttataatactccctccgatc 2938693
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>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145661

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   ttataatactccctccgatc 210
             ||||||||||||||||||||
Sbjct: 77334 ttataatactccctccgatc 77353
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>emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-49E10 on chromosome 3,
             complete sequence
          Length = 122591

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   taatactccctccgatccta 213
             ||||||||||||||||||||
Sbjct: 92058 taatactccctccgatccta 92039
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>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254,
             complete sequence
          Length = 118592

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   taatactccctccgatcctaatta 217
             |||||||||||||| |||||||||
Sbjct: 57387 taatactccctccgttcctaatta 57364
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>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001,
             complete sequence
          Length = 103397

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   taatactccctccgatcctaatta 217
             |||||||||||||| |||||||||
Sbjct: 30933 taatactccctccgttcctaatta 30910
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>emb|AL824707.7| Mouse DNA sequence from clone RP23-95O1 on chromosome 4, complete
              sequence
          Length = 225002

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    tcacaactttatagtcactg 353
              ||||||||||||||||||||
Sbjct: 111464 tcacaactttatagtcactg 111445
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>emb|AL669845.9| Mouse DNA sequence from clone RP23-43C21 on chromosome 11, complete
           sequence
          Length = 243954

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 ggcctcaggacaatattgga 245
           ||||||||||||||||||||
Sbjct: 386 ggcctcaggacaatattgga 405


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,238,947
Number of Sequences: 3902068
Number of extensions: 3238947
Number of successful extensions: 63336
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 62961
Number of HSP's gapped (non-prelim): 376
length of query: 405
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 383
effective length of database: 17,147,199,772
effective search space: 6567377512676
effective search space used: 6567377512676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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