ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete... 101 1e-18
2emb|BX009572.1|CNS08FJS Single read from an extremity of a full-... 46 0.056
3ref|XM_320984.2| Anopheles gambiae str. PEST ENSANGP00000019928 ... 46 0.056
4gb|U58757.2| Caenorhabditis elegans cosmid C01B10, complete sequ... 42 0.88
5gb|AC084509.1|CBRG15F12 Caenorhabditis briggsae cosmid G15F12, c... 42 0.88
6gb|AC102231.12| Mus musculus chromosome 18, clone RP24-76A21, co... 40 3.5
7ref|NM_006251.5| Homo sapiens protein kinase, AMP-activated, alp... 40 3.5
8ref|NM_206907.3| Homo sapiens protein kinase, AMP-activated, alp... 40 3.5
9gb|AC121296.7| Mus musculus chromosome 14, clone RP23-286K8, com... 40 3.5
10gb|AC162887.5| Mus musculus chromosome 19, clone RP23-414O6, com... 40 3.5
11emb|BX950868.13| Zebrafish DNA sequence from clone DKEY-54I3 in ... 40 3.5
12emb|BX927339.16| Zebrafish DNA sequence from clone CH211-251A10 ... 40 3.5
13gb|AC133076.3| Mus musculus BAC clone RP24-400C14 from chromosom... 40 3.5
14gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosom... 40 3.5
15emb|CR847906.11| Zebrafish DNA sequence from clone DKEYP-4C4 in ... 40 3.5
16emb|CR382363.14| Zebrafish DNA sequence from clone DKEY-23P11 in... 40 3.5
17emb|BX465848.13| Zebrafish DNA sequence from clone RP71-84E6, co... 40 3.5
18gb|AC125539.4| Mus musculus BAC clone RP23-150M18 from 15, compl... 40 3.5
19gb|AC107765.9| Mus musculus chromosome 17, clone RP23-166P7, com... 40 3.5
20gb|AY351354.1| Chasmistes brevirostris anonymous nuclear locus 0... 40 3.5
21emb|BX323049.20| Zebrafish DNA sequence from clone DKEY-30L22 in... 40 3.5
22emb|CR293532.12| Zebrafish DNA sequence from clone DKEY-40N15 in... 40 3.5
23emb|AL592293.7| Human DNA sequence from clone RP11-54D18 on chro... 40 3.5
24emb|CR318589.8| Zebrafish DNA sequence from clone DKEYP-107F9 in... 40 3.5
25gb|AC008810.8| Homo sapiens chromosome 5 clone CTD-2096I23, comp... 40 3.5
26emb|BX511111.16| Zebrafish DNA sequence from clone RP71-62I8 in ... 40 3.5
27emb|CR376771.10| Zebrafish DNA sequence from clone DKEY-160I7 in... 40 3.5
28emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS... 40 3.5
29emb|BX548011.28| Zebrafish DNA sequence from clone DKEY-237G15, ... 40 3.5
30emb|AL645582.22| Mouse DNA sequence from clone RP23-302J15 on ch... 40 3.5
31emb|CR790376.10| Zebrafish DNA sequence from clone DKEY-66K12 in... 40 3.5
32emb|BX321871.5| Zebrafish DNA sequence from clone CH211-241N15 i... 40 3.5
33emb|CR847792.4| Zebrafish DNA sequence from clone DKEY-22A20 in ... 40 3.5
34emb|BX950171.9| Zebrafish DNA sequence from clone DKEY-1D1 in li... 40 3.5
35emb|AL627164.8| Zebrafish DNA sequence from clone RP71-1I20 in l... 40 3.5
36emb|BX296567.23| Zebrafish DNA sequence from clone DKEY-261P22 i... 40 3.5
37emb|BX469910.10| Zebrafish DNA sequence from clone CH211-64I20 i... 40 3.5
38emb|BX571711.8| Zebrafish DNA sequence from clone DKEY-57L19 in ... 40 3.5
39gb|AC090123.68| Mus musculus strain C57BL/6J clone rp23-323l3 ma... 40 3.5
40gb|AC027322.4| Homo sapiens chromosome 5 clone CTD-2027G10, comp... 40 3.5
41emb|BX248091.12| Zebrafish DNA sequence from clone DKEY-257I9, c... 40 3.5
42emb|BX649506.13| Zebrafish DNA sequence from clone DKEY-43L23 in... 40 3.5
43emb|AL391686.10| Human DNA sequence from clone CTB-BR164I22 on c... 40 3.5
44emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in ... 40 3.5
45emb|BX649307.12| Zebrafish DNA sequence from clone CH211-209P16 ... 40 3.5
46emb|BX465205.16| Zebrafish DNA sequence from clone CH211-197E7 i... 40 3.5
47emb|BX664714.16| Zebrafish DNA sequence from clone DKEY-204C3 in... 40 3.5
48dbj|AK044925.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 40 3.5
49gb|AC022486.4|AC022486 Homo sapiens BAC clone RP11-569J3 from Y,... 40 3.5
50gb|AC083909.20|AC083909 Mus musculus 1 BAC RP23-424A2 (Roswell P... 40 3.5
51gb|AC008219.4|AC008219 Drosophila melanogaster, chromosome 3R, r... 40 3.5
52gb|AC007379.2|AC007379 Homo sapiens BAC clone RP11-143C1 from Y,... 40 3.5
53gb|AC012315.5|AC012315 Homo sapiens chromosome 5 clone CTD-2122K... 40 3.5
54emb|BX530067.4| Zebrafish DNA sequence from clone DKEY-194C21 in... 40 3.5
55emb|BX649341.3| Zebrafish DNA sequence from clone DKEY-199K11 in... 40 3.5
56emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in... 40 3.5
57emb|BX649620.5| Zebrafish DNA sequence from clone DKEY-11N14 in ... 40 3.5
58emb|BX649328.6| Zebrafish DNA sequence from clone DKEY-72L17 in ... 40 3.5
59emb|AL929164.12| Mouse DNA sequence from clone RP23-226L18 on ch... 40 3.5
60ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5... 40 3.5
61emb|CR388193.14| Zebrafish DNA sequence from clone DKEY-81L19 in... 40 3.5
62emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 i... 40 3.5
63emb|BX842593.8| Zebrafish DNA sequence from clone DKEY-19K8 in l... 40 3.5
64emb|AL591510.11| Zebrafish DNA sequence from clone BUSM1-228E24 ... 40 3.5
65emb|CR854848.7| Zebrafish DNA sequence from clone DKEY-287E13 in... 40 3.5
66emb|CR854899.16| Zebrafish DNA sequence from clone CH211-268B14 ... 40 3.5
67gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 11... 40 3.5
68dbj|AB096072.1| Achaearanea tepidariorum At.dpp mRNA for decapen... 40 3.5
69emb|CR759951.21| Zebrafish DNA sequence from clone DKEY-256E7 in... 40 3.5
70gb|AF060868.1|AF060868 Mus musculus tumor susceptibility protein... 40 3.5
71emb|BX005088.4| Zebrafish DNA sequence from clone CH211-160E15 i... 40 3.5
72emb|CR388097.9| Zebrafish DNA sequence from clone CH211-10J9 in ... 40 3.5
73emb|AL929161.10| Zebrafish DNA sequence from clone CH211-93A19, ... 40 3.5
74gb|BC037303.2| Homo sapiens protein kinase, AMP-activated, alpha... 40 3.5
75gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, comple... 40 3.5
76emb|AL929568.12| Zebrafish DNA sequence from clone CH211-59K8, c... 40 3.5
77emb|BX649283.16| Zebrafish DNA sequence from clone DKEYP-86C4 in... 40 3.5
78dbj|AP006662.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 3.5
79emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, ... 40 3.5 
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds
          Length = 1373

 Score =  101 bits (51), Expect = 1e-18
 Identities = 103/119 (86%), Gaps = 1/119 (0%)
 Strand = Plus / Minus

                                                                        
Query: 94   aattacaagcttggcgctgaagctgttacatgataatatccttgcaaacataaggaaccc 153
            ||||||||||||| | || | ||||||||||||||||||||||||||||||| || |   
Sbjct: 1297 aattacaagcttgtcact-aggctgttacatgataatatccttgcaaacatagggcagtg 1239

                                                                       
Query: 154  cctttatttttctttatcggagcacaccatccatacataaacaaagcacactgcaaggg 212
            |||||||||||||| | |  |||| |||||||||||||||| ||||||||||| |||||
Sbjct: 1238 cctttatttttcttcagcaaagcaaaccatccatacataaataaagcacactgaaaggg 1180
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>emb|BX009572.1|CNS08FJS Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA15CA02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 535

 Score = 46.1 bits (23), Expect = 0.056
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 34  tacatacacaaacaaacttattg 56
           |||||||||||||||||||||||
Sbjct: 234 tacatacacaaacaaacttattg 256
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>ref|XM_320984.2| Anopheles gambiae str. PEST ENSANGP00000019928 (ENSANGG00000017439),
            partial mRNA
          Length = 1872

 Score = 46.1 bits (23), Expect = 0.056
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 34   tacatacacaaacaaacttattg 56
            |||||||||||||||||||||||
Sbjct: 1627 tacatacacaaacaaacttattg 1605
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>gb|U58757.2| Caenorhabditis elegans cosmid C01B10, complete sequence
          Length = 45931

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    aatatacatacacaaacaaac 50
             |||||||||||||||||||||
Sbjct: 32091 aatatacatacacaaacaaac 32111
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>gb|AC084509.1|CBRG15F12 Caenorhabditis briggsae cosmid G15F12, complete sequence
          Length = 22986

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 231   ggtaaataaacttttgagaaa 251
             |||||||||||||||||||||
Sbjct: 10099 ggtaaataaacttttgagaaa 10079
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>gb|AC102231.12| Mus musculus chromosome 18, clone RP24-76A21, complete sequence
          Length = 174136

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aatatacatacacaaacaaa 49
             ||||||||||||||||||||
Sbjct: 30034 aatatacatacacaaacaaa 30053
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>ref|NM_006251.5| Homo sapiens protein kinase, AMP-activated, alpha 1 catalytic subunit
            (PRKAA1), transcript variant 1, mRNA
          Length = 5085

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   atatacatacacaaacaaac 50
            ||||||||||||||||||||
Sbjct: 3042 atatacatacacaaacaaac 3023
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>ref|NM_206907.3| Homo sapiens protein kinase, AMP-activated, alpha 1 catalytic subunit
            (PRKAA1), transcript variant 2, mRNA
          Length = 5130

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   atatacatacacaaacaaac 50
            ||||||||||||||||||||
Sbjct: 3087 atatacatacacaaacaaac 3068
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>gb|AC121296.7| Mus musculus chromosome 14, clone RP23-286K8, complete sequence
          Length = 232049

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 97235 atatacatacacaaacaaac 97216
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>gb|AC162887.5| Mus musculus chromosome 19, clone RP23-414O6, complete sequence
          Length = 190704

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    tatatcaatatacatacacaaaca 47
             |||||| |||||||||||||||||
Sbjct: 85500 tatatccatatacatacacaaaca 85477
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>emb|BX950868.13| Zebrafish DNA sequence from clone DKEY-54I3 in linkage group 5, complete
              sequence
          Length = 204339

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     atatacatacacaaacaaac 50
              ||||||||||||||||||||
Sbjct: 137990 atatacatacacaaacaaac 137971
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>emb|BX927339.16| Zebrafish DNA sequence from clone CH211-251A10 in linkage group 17,
            complete sequence
          Length = 66778

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 24   tatatcaatatacatacaca 43
            ||||||||||||||||||||
Sbjct: 7609 tatatcaatatacatacaca 7628
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>gb|AC133076.3| Mus musculus BAC clone RP24-400C14 from chromosome 15, complete sequence
          Length = 200588

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     atatacatacacaaacaaac 50
              ||||||||||||||||||||
Sbjct: 150140 atatacatacacaaacaaac 150159
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>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence
          Length = 164612

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 31    atatacatacacaaacaaacttat 54
             ||||||||||||||||| ||||||
Sbjct: 96632 atatacatacacaaacatacttat 96609
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>emb|CR847906.11| Zebrafish DNA sequence from clone DKEYP-4C4 in linkage group 6,
             complete sequence
          Length = 198346

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 10428 atatacatacacaaacaaac 10409
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>emb|CR382363.14| Zebrafish DNA sequence from clone DKEY-23P11 in linkage group 25,
             complete sequence
          Length = 129281

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 65610 atacatacacaaacaaactt 65591
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>emb|BX465848.13| Zebrafish DNA sequence from clone RP71-84E6, complete sequence
          Length = 179411

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 57753 atatacatacacaaacaaac 57734
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>gb|AC125539.4| Mus musculus BAC clone RP23-150M18 from 15, complete sequence
          Length = 204453

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 15820 atatacatacacaaacaaac 15839
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>gb|AC107765.9| Mus musculus chromosome 17, clone RP23-166P7, complete sequence
          Length = 229687

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     atatacatacacaaacaaac 50
              ||||||||||||||||||||
Sbjct: 106285 atatacatacacaaacaaac 106304
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>gb|AY351354.1| Chasmistes brevirostris anonymous nuclear locus 083 marker
          sequence
          Length = 513

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 31 atatacatacacaaacaaacttat 54
          ||||||||||||| ||||||||||
Sbjct: 36 atatacatacacacacaaacttat 59
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>emb|BX323049.20| Zebrafish DNA sequence from clone DKEY-30L22 in linkage group 9,
             complete sequence
          Length = 214040

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 86203 atacatacacaaacaaactt 86222
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>emb|CR293532.12| Zebrafish DNA sequence from clone DKEY-40N15 in linkage group 23,
             complete sequence
          Length = 146597

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 60331 atatacatacacaaacaaac 60350
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>emb|AL592293.7| Human DNA sequence from clone RP11-54D18 on chromosome 9 Contains a
             lactate dehdrogenase A (LDHA) (LOC158222) pseudogene, a
             novel pseudogene (FLJ20543), a pseudogene similar to part
             of chloride channel 3 (CLCN3) (CLC3), a pseudogene similar
             to part of PC4 and SFRS1 interacting protein 2 (PSIP2) and
             a CpG island, complete sequence
          Length = 157574

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 19057 atacatacacaaacaaactt 19076
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>emb|CR318589.8| Zebrafish DNA sequence from clone DKEYP-107F9 in linkage group 14,
             complete sequence
          Length = 97627

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 21908 atatacatacacaaacaaac 21889
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>gb|AC008810.8| Homo sapiens chromosome 5 clone CTD-2096I23, complete sequence
          Length = 157325

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 82344 atatacatacacaaacaaac 82325
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>emb|BX511111.16| Zebrafish DNA sequence from clone RP71-62I8 in linkage group 17, complete
              sequence
          Length = 123253

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     atacatacacaaacaaactt 52
              ||||||||||||||||||||
Sbjct: 120368 atacatacacaaacaaactt 120387
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>emb|CR376771.10| Zebrafish DNA sequence from clone DKEY-160I7 in linkage group 1,
             complete sequence
          Length = 178445

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 49000 atacatacacaaacaaactt 49019
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>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces
               hansenii
          Length = 1249565

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 31      atatacatacacaaacaaac 50
               ||||||||||||||||||||
Sbjct: 1068586 atatacatacacaaacaaac 1068567
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>emb|BX548011.28| Zebrafish DNA sequence from clone DKEY-237G15, complete sequence
          Length = 211004

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 10427 atatacatacacaaacaaac 10446
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>emb|AL645582.22| Mouse DNA sequence from clone RP23-302J15 on chromosome 11 Contains two
             CpG islands, complete sequence
          Length = 135978

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 32880 atatacatacacaaacaaac 32861
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>emb|CR790376.10| Zebrafish DNA sequence from clone DKEY-66K12 in linkage group 4,
             complete sequence
          Length = 92591

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 64543 atatacatacacaaacaaac 64524



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 11136 atatacatacacaaacaaac 11117
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>emb|BX321871.5| Zebrafish DNA sequence from clone CH211-241N15 in linkage group 8,
            complete sequence
          Length = 174723

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   atatacatacacaaacaaac 50
            ||||||||||||||||||||
Sbjct: 7817 atatacatacacaaacaaac 7798
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>emb|CR847792.4| Zebrafish DNA sequence from clone DKEY-22A20 in linkage group 3,
             complete sequence
          Length = 106088

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 38311 atacatacacaaacaaactt 38292
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>emb|BX950171.9| Zebrafish DNA sequence from clone DKEY-1D1 in linkage group 5, complete
             sequence
          Length = 120091

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 53729 atacatacacaaacaaactt 53748
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>emb|AL627164.8| Zebrafish DNA sequence from clone RP71-1I20 in linkage group 11,
             complete sequence
          Length = 84892

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 75548 atacatacacaaacaaactt 75567
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>emb|BX296567.23| Zebrafish DNA sequence from clone DKEY-261P22 in linkage group 15,
              complete sequence
          Length = 224041

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     atatacatacacaaacaaac 50
              ||||||||||||||||||||
Sbjct: 213325 atatacatacacaaacaaac 213306



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     atatacatacacaaacaaac 50
              ||||||||||||||||||||
Sbjct: 202488 atatacatacacaaacaaac 202469
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>emb|BX469910.10| Zebrafish DNA sequence from clone CH211-64I20 in linkage group 8,
             complete sequence
          Length = 198019

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 98297 atatacatacacaaacaaac 98316



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 61308 atatacatacacaaacaaac 61289
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>emb|BX571711.8| Zebrafish DNA sequence from clone DKEY-57L19 in linkage group 21,
            complete sequence
          Length = 193674

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   atatacatacacaaacaaac 50
            ||||||||||||||||||||
Sbjct: 1622 atatacatacacaaacaaac 1641
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>gb|AC090123.68| Mus musculus strain C57BL/6J clone rp23-323l3 map 7, complete sequence
          Length = 223438

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    aatatacatacacaaacaaa 49
             ||||||||||||||||||||
Sbjct: 79020 aatatacatacacaaacaaa 79001
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>gb|AC027322.4| Homo sapiens chromosome 5 clone CTD-2027G10, complete sequence
          Length = 156248

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 34   tacatacacaaacaaactta 53
            ||||||||||||||||||||
Sbjct: 8992 tacatacacaaacaaactta 8973
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>emb|BX248091.12| Zebrafish DNA sequence from clone DKEY-257I9, complete sequence
          Length = 165075

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 89946 atacatacacaaacaaactt 89965



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 87206 atacatacacaaacaaactt 87225
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>emb|BX649506.13| Zebrafish DNA sequence from clone DKEY-43L23 in linkage group 22,
            complete sequence
          Length = 110752

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   atatacatacacaaacaaac 50
            ||||||||||||||||||||
Sbjct: 6444 atatacatacacaaacaaac 6463
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>emb|AL391686.10| Human DNA sequence from clone CTB-BR164I22 on chromosome 10, complete
             sequence
          Length = 59938

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ttaattatatcaatatacat 38
             ||||||||||||||||||||
Sbjct: 29796 ttaattatatcaatatacat 29777
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>emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in linkage group 17,
              complete sequence
          Length = 247607

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     atatacatacacaaacaaac 50
              ||||||||||||||||||||
Sbjct: 167248 atatacatacacaaacaaac 167229



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 26257 atatacatacacaaacaaac 26276
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>emb|BX649307.12| Zebrafish DNA sequence from clone CH211-209P16 in linkage group 4,
              complete sequence
          Length = 164976

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     atatacatacacaaacaaac 50
              ||||||||||||||||||||
Sbjct: 131425 atatacatacacaaacaaac 131444
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>emb|BX465205.16| Zebrafish DNA sequence from clone CH211-197E7 in linkage group 23,
             complete sequence
          Length = 189019

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 39942 atatacatacacaaacaaac 39961
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>emb|BX664714.16| Zebrafish DNA sequence from clone DKEY-204C3 in linkage group 7,
             complete sequence
          Length = 159633

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 74501 atatacatacacaaacaaac 74482
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>dbj|AK044925.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
            enriched library, clone:B130012F14 product:FNP001 homolog
            [Homo sapiens], full insert sequence
          Length = 2270

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 24   tatatcaatatacatacacaaaca 47
            |||||| |||||||||||||||||
Sbjct: 1183 tatatccatatacatacacaaaca 1160
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>gb|AC022486.4|AC022486 Homo sapiens BAC clone RP11-569J3 from Y, complete sequence
          Length = 156357

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    ataaacaaagcacactgcaa 209
              ||||||||||||||||||||
Sbjct: 116672 ataaacaaagcacactgcaa 116691
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>gb|AC083909.20|AC083909 Mus musculus 1 BAC RP23-424A2 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 204857

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ttaattatatcaatatacat 38
              ||||||||||||||||||||
Sbjct: 181454 ttaattatatcaatatacat 181473
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>gb|AC008219.4|AC008219 Drosophila melanogaster, chromosome 3R, region 100A-100A, BAC clone
             BACR03C06, complete sequence
          Length = 156335

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    caatatacatacacaaacaa 48
             ||||||||||||||||||||
Sbjct: 33311 caatatacatacacaaacaa 33292
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>gb|AC007379.2|AC007379 Homo sapiens BAC clone RP11-143C1 from Y, complete sequence
          Length = 174082

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   ataaacaaagcacactgcaa 209
             ||||||||||||||||||||
Sbjct: 21693 ataaacaaagcacactgcaa 21674
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>gb|AC012315.5|AC012315 Homo sapiens chromosome 5 clone CTD-2122K7, complete sequence
          Length = 170216

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     tacatacacaaacaaactta 53
              ||||||||||||||||||||
Sbjct: 164974 tacatacacaaacaaactta 164955
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>emb|BX530067.4| Zebrafish DNA sequence from clone DKEY-194C21 in linkage group 19,
              complete sequence
          Length = 203882

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     atacatacacaaacaaactt 52
              ||||||||||||||||||||
Sbjct: 194603 atacatacacaaacaaactt 194622
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>emb|BX649341.3| Zebrafish DNA sequence from clone DKEY-199K11 in linkage group 22,
              complete sequence
          Length = 148057

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     atatacatacacaaacaaac 50
              ||||||||||||||||||||
Sbjct: 146647 atatacatacacaaacaaac 146628
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>emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in linkage group 22,
              complete sequence
          Length = 165445

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     atatacatacacaaacaaac 50
              ||||||||||||||||||||
Sbjct: 158661 atatacatacacaaacaaac 158642
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>emb|BX649620.5| Zebrafish DNA sequence from clone DKEY-11N14 in linkage group 20,
             complete sequence
          Length = 61794

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 61416 atatacatacacaaacaaac 61435
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>emb|BX649328.6| Zebrafish DNA sequence from clone DKEY-72L17 in linkage group 20,
              complete sequence
          Length = 224173

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     atatacatacacaaacaaac 50
              ||||||||||||||||||||
Sbjct: 109436 atatacatacacaaacaaac 109455
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>emb|AL929164.12| Mouse DNA sequence from clone RP23-226L18 on chromosome 2, complete
             sequence
          Length = 170293

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    tatatcaatatacatacaca 43
             ||||||||||||||||||||
Sbjct: 38818 tatatcaatatacatacaca 38837
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>ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5 (P4-P5@) on chromosome Y
          Length = 1351786

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 190     ataaacaaagcacactgcaa 209
               ||||||||||||||||||||
Sbjct: 1174694 ataaacaaagcacactgcaa 1174675



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 190     ataaacaaagcacactgcaa 209
               ||||||||||||||||||||
Sbjct: 1113516 ataaacaaagcacactgcaa 1113535
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>emb|CR388193.14| Zebrafish DNA sequence from clone DKEY-81L19 in linkage group 14,
            complete sequence
          Length = 11952

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   atatacatacacaaacaaac 50
            ||||||||||||||||||||
Sbjct: 3659 atatacatacacaaacaaac 3678
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>emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 in linkage group 19,
             complete sequence
          Length = 180950

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 61167 atacatacacaaacaaactt 61186
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>emb|BX842593.8| Zebrafish DNA sequence from clone DKEY-19K8 in linkage group 20,
             complete sequence
          Length = 127151

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 36398 atatacatacacaaacaaac 36417
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>emb|AL591510.11| Zebrafish DNA sequence from clone BUSM1-228E24 in linkage group 6,
             complete sequence
          Length = 99579

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 80281 atacatacacaaacaaactt 80300
to top
>emb|CR854848.7| Zebrafish DNA sequence from clone DKEY-287E13 in linkage group 15,
             complete sequence
          Length = 31765

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 22085 atacatacacaaacaaactt 22104
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>emb|CR854899.16| Zebrafish DNA sequence from clone CH211-268B14 in linkage group 14,
             complete sequence
          Length = 142230

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 99941 atatacatacacaaacaaac 99922
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>gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 113 of 118 of the complete
              sequence
          Length = 236096

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     caatatacatacacaaacaa 48
              ||||||||||||||||||||
Sbjct: 210265 caatatacatacacaaacaa 210246
to top
>dbj|AB096072.1| Achaearanea tepidariorum At.dpp mRNA for decapentaplegic, complete
           cds
          Length = 2634

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 tggtaaataaacttttgaga 249
           ||||||||||||||||||||
Sbjct: 498 tggtaaataaacttttgaga 479
to top
>emb|CR759951.21| Zebrafish DNA sequence from clone DKEY-256E7 in linkage group 1,
            complete sequence
          Length = 120721

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   atacatacacaaacaaactt 52
            ||||||||||||||||||||
Sbjct: 6970 atacatacacaaacaaactt 6989
to top
>gb|AF060868.1|AF060868 Mus musculus tumor susceptibility protein 101 (tsg101) gene, complete
             cds
          Length = 33613

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    aatatacatacacaaacaaa 49
             ||||||||||||||||||||
Sbjct: 24246 aatatacatacacaaacaaa 24227
to top
>emb|BX005088.4| Zebrafish DNA sequence from clone CH211-160E15 in linkage group 9,
              complete sequence
          Length = 193489

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     atacatacacaaacaaactt 52
              ||||||||||||||||||||
Sbjct: 158083 atacatacacaaacaaactt 158064
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>emb|CR388097.9| Zebrafish DNA sequence from clone CH211-10J9 in linkage group 3,
             complete sequence
          Length = 195927

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atacatacacaaacaaactt 52
             ||||||||||||||||||||
Sbjct: 75726 atacatacacaaacaaactt 75745
to top
>emb|AL929161.10| Zebrafish DNA sequence from clone CH211-93A19, complete sequence
          Length = 197027

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 91097 atatacatacacaaacaaac 91078
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>gb|BC037303.2| Homo sapiens protein kinase, AMP-activated, alpha 1 catalytic
            subunit, transcript variant 1, mRNA (cDNA clone MGC:33776
            IMAGE:5265054), complete cds
          Length = 5083

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   atatacatacacaaacaaac 50
            ||||||||||||||||||||
Sbjct: 3024 atatacatacacaaacaaac 3005
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>gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, complete sequence
          Length = 214005

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   tacataaacaaagcacactg 206
             ||||||||||||||||||||
Sbjct: 31022 tacataaacaaagcacactg 31003
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>emb|AL929568.12| Zebrafish DNA sequence from clone CH211-59K8, complete sequence
          Length = 185257

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     atacatacacaaacaaactt 52
              ||||||||||||||||||||
Sbjct: 163971 atacatacacaaacaaactt 163990
to top
>emb|BX649283.16| Zebrafish DNA sequence from clone DKEYP-86C4 in linkage group 14,
             complete sequence
          Length = 193551

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    atatacatacacaaacaaac 50
             ||||||||||||||||||||
Sbjct: 88599 atatacatacacaaacaaac 88618
to top
>dbj|AP006662.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10F06, TM0347b,
             complete sequence
          Length = 71349

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    aatatacatacacaaacaaa 49
             ||||||||||||||||||||
Sbjct: 46995 aatatacatacacaaacaaa 46976
to top
>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence
          Length = 154450

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     atacatacacaaacaaactt 52
              ||||||||||||||||||||
Sbjct: 111845 atacatacacaaacaaactt 111864


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,733,602
Number of Sequences: 3902068
Number of extensions: 3733602
Number of successful extensions: 80919
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80762
Number of HSP's gapped (non-prelim): 156
length of query: 268
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 246
effective length of database: 17,147,199,772
effective search space: 4218211143912
effective search space used: 4218211143912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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