Clone Name | rbart39d02 |
---|---|
Clone Library Name | barley_pub |
>PAR1_XENLA (P47749) Proteinase-activated receptor 1 precursor (PAR-1)| (Thrombin receptor) Length = 420 Score = 34.7 bits (78), Expect = 0.14 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Frame = -3 Query: 240 HACMRTRAFAMAVRPLFLRIRCFDSLI*NCQNIL----YIQKQRQY*IISVLFSRYYFVR 73 ++C +TRA +AV L + I CF N+L Y+Q+ ++ L+ Y Sbjct: 303 NSCKKTRALFLAVVVLCVFIICFGPT-----NVLFLTHYLQEANEF-----LYFAYILSA 352 Query: 72 ATSSISCCVLPFDYY 28 S+SCC+ P YY Sbjct: 353 CVGSVSCCLDPLIYY 367
>HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecithin-dependent| haemolysin) (LDH) (Atypical phospholipase) (Phospholipase A2) (Lysophospholipase) Length = 418 Score = 32.7 bits (73), Expect = 0.55 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = -2 Query: 490 NAEVMCSHPGTTACPAADHDDYMFWDMLHPTHAT 389 + + M +H + C A+ + ++FWD+ HPT AT Sbjct: 365 SVDYMYTHALRSECAASGAEKFVFWDVTHPTTAT 398
>RFBE_SHIFL (P37781) Putative O-antigen transporter| Length = 418 Score = 30.8 bits (68), Expect = 2.1 Identities = 21/98 (21%), Positives = 46/98 (46%), Gaps = 4/98 (4%) Frame = +3 Query: 78 RNNNVKITHLLSSTASVFECTRCFGSFKLNCQN---ILYVGREGVRPLQMHVCACMHA-C 245 R+N+ + T ++S++ S CFG+F L + + Y+ GV + + + A C Sbjct: 69 RDNHHERTKVISTSTSFLVLFSCFGAFLLLIFSDGIVNYLKISGVEHSDIQLAFKLLAIC 128 Query: 246 MPSMVYSSATTILIAGDSFLPVTSVAKLTGSPYLGPLP 359 +P + + + ++ GD + ++ K S + +P Sbjct: 129 IPLFILNQLWSAILEGDEKFGIVNIQKSISSSCIAGIP 166
>ECM2_HUMAN (O94769) Extracellular matrix protein 2 precursor (Matrix| glycoprotein SC1/ECM2) Length = 699 Score = 29.6 bits (65), Expect = 4.7 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +3 Query: 69 LHVRNNNVKITHLLSSTASVFECTRCFGSFKLNCQNI 179 LH+ NN +KI + S T F C R + S L QNI Sbjct: 665 LHLENNYIKIREIPSYT---FSCIRSYSSIVLKPQNI 698
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 29.6 bits (65), Expect = 4.7 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 493 LNAEVMCSHPGTTACPAADHDDYMFWDMLHPT 398 L+A +C + CP + Y+FWD +HPT Sbjct: 484 LSAGALCKKSTSKICP--NTSSYLFWDGVHPT 513
>HBB_LEPPA (P02138) Hemoglobin beta subunit (Hemoglobin beta chain)| (Beta-globin) Length = 147 Score = 29.3 bits (64), Expect = 6.1 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +3 Query: 75 VRNNNVKITHLLSSTASVFECTRCFGSFKLNCQNILYVGRE 197 +++NN H A++ ECTR FG+ K + N+ ++ E Sbjct: 54 IKHNNKVSAHGRKVLAAIIECTRHFGNIKGHLANLSHLHSE 94
>MMRN1_HUMAN (Q13201) Multimerin-1 precursor (Endothelial cell multimerin 1)| (EMILIN-4) (Elastin microfibril interface located protein 4) (Elastin microfibril interfacer 4) Length = 1228 Score = 29.3 bits (64), Expect = 6.1 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = -2 Query: 331 VNFATLVTGKNESPAIKMVVADE*TMDGMHACMHAHTCICNGRT 200 VN T++ G+ + ++ +E + H C + TCI NGRT Sbjct: 1019 VNLTTVLIGRTQRNTDNIIYPEEYSSCSRHPCQNGGTCI-NGRT 1061 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,399,410 Number of Sequences: 219361 Number of extensions: 1078106 Number of successful extensions: 3287 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3177 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3281 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)