Clone Name | rbart39c10 |
---|---|
Clone Library Name | barley_pub |
>NUOG_BUCAP (Q8K9Y2) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 910 Score = 31.2 bits (69), Expect = 1.0 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +2 Query: 278 SNPSSLSLRFE-NLYGFSMGLPSSSHLAVTWYCGKRSPRSWRKWAR 412 S P F ++ G+S S SH+ W+ G SP++W K+ + Sbjct: 727 SQPKDADTMFSFSMEGYSQPNKSISHIPFAWFPGWNSPQAWNKFQK 772
>EFG_MYCS5 (Q4A703) Elongation factor G (EF-G)| Length = 696 Score = 31.2 bits (69), Expect = 1.0 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -1 Query: 247 DGDVLAEKGTPVSARFSHSTEARLLVTGSRGQAHLVKEHEQNCWK 113 DG V+ P+S F +STE R + +G RG + +H + C K Sbjct: 635 DGAVIVRAKVPLSEMFGYSTELRSMTSG-RGTYQMQFDHYEKCPK 678
>NSD1_MOUSE (O88491) Histone-lysine N-methyltransferase, H3 lysine-36 and H4| lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase) (H4-K20-HMTase) (Nuclear receptor binding SET domain containing protein 1) (NR-binding SET domain containing protein) Length = 2588 Score = 29.6 bits (65), Expect = 3.0 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -2 Query: 357 AKCEDDGKPMEKPYKFSNRRLRELGLEFTPLNESLYETVTCLQKK 223 AK D K +EK F NR+ ELG E N+ L+ + KK Sbjct: 1012 AKQSDPDKNLEKEPSFENRKGPELGSEMNTENDELHGVNQVVPKK 1056
>SYI_PROMA (Q7VDV0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 969 Score = 29.3 bits (64), Expect = 3.9 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -2 Query: 291 ELGLEFTPLNESLYETVTCLQKKGHLSL 208 E + +P+NESL ++T LQ+ GH S+ Sbjct: 868 EASVRISPINESLQNSLTFLQENGHNSV 895
>KPTA_PSE14 (Q48DQ3) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)| Length = 188 Score = 28.9 bits (63), Expect = 5.2 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%) Frame = -1 Query: 232 AEKGTPVS------ARFSHSTEARLLVTGSRGQAHLVKEHEQNCWKKRRYG 98 AEK P + +RF S E + L+ GSR HL ++ E +RYG Sbjct: 92 AEKEPPATLYHGTASRFMTSIETQGLIAGSRHHVHLTEDPETAMSVGKRYG 142
>DFRA_MAIZE (P51108) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 357 Score = 28.9 bits (63), Expect = 5.2 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%) Frame = -2 Query: 393 LLGDLFPQYHVTAK---CEDDGKPMEKPYKFSNRRLRELGLEF--TPLNESLYETVTCLQ 229 +L D +P+Y V + +DD +P+ +FS+++L++LG F L + + Q Sbjct: 271 MLRDRYPEYDVPQRFPGIQDDLQPV----RFSSKKLQDLGFTFRYKTLEDMFDAAIRTCQ 326 Query: 228 KKGHLSL 208 +KG + L Sbjct: 327 EKGLIPL 333
>UBIG_HAEDU (Q7VKW2) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)| (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) Length = 236 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/47 (27%), Positives = 24/47 (51%) Frame = -2 Query: 312 FSNRRLRELGLEFTPLNESLYETVTCLQKKGHLSLPVSLIAQKRAYL 172 + + +L L T N ++ VTC++ H+ P+S+I +A L Sbjct: 99 YQQTTVEDLRLNHTACNAEKFDVVTCMEMLEHVPDPLSVIQSCKALL 145
>KPTA_PSESM (Q87VZ5) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)| Length = 187 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = -1 Query: 211 SARFSHSTEARLLVTGSRGQAHLVKEHEQNCWKKRRYG 98 ++RF S E + L+ GSR HL ++ E +RYG Sbjct: 105 ASRFMASIETQGLIAGSRHHVHLTEDPETALSVGKRYG 142
>EI2B_AQUAE (O67879) Putative translation initiation factor eIF-2B (eIF-2B| GDP-GTP exchange factor) Length = 456 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -2 Query: 348 EDDGKPMEKPYKFSNRRLRELGLEFTPLN 262 E++ K +EK +N+R+ E+G E PLN Sbjct: 235 EEEAKEIEKEDYEANKRMGEIGSEIVPLN 263
>HIPL2_ARATH (Q94F08) HIPL2 protein precursor| Length = 696 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Frame = +2 Query: 230 CKHVTVSYKLSFNGVNSNPSSLSL--RFENLYGFSMGLP-SSSH 352 C++ TV + + NG +S+PS+ + E F+MGLP SSSH Sbjct: 327 CRYQTVVSEYTANGTSSSPSTAKIGKASEVRRIFTMGLPYSSSH 370
>FZO1_YEAST (P38297) Transmembrane GTPase FZO1 (EC 3.6.5.-)| Length = 855 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Frame = -2 Query: 405 HFLQLLGDLFPQYHVTAKCEDDG--KPMEKPYKFSN 304 HF+ GD P YH ED G KP + PY S+ Sbjct: 405 HFVSKNGDELPHYHNENDNEDHGDRKPDDDPYSSSD 440 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,622,381 Number of Sequences: 219361 Number of extensions: 1187672 Number of successful extensions: 3478 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3384 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3475 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)