ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY100470.1| Oryza sativa (indica cultivar-group) putative sol... 220 3e-54
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 220 3e-54
3dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic D... 220 3e-54
4dbj|AK102935.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
5dbj|AK071186.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
6ref|NM_191801.1| Oryza sativa (japonica cultivar-group), predic... 218 1e-53
7dbj|AK102699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 8e-52
8gb|AY108366.1| Zea mays PCO145512 mRNA sequence 198 1e-47
9gb|AF453837.1| Zea mays satase isoform I mRNA, complete cds 141 2e-30
10ref|XM_464531.1| Oryza sativa (japonica cultivar-group), mRNA 94 5e-16
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
12dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
13gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome... 90 8e-15
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 90 8e-15
15gb|BT008919.1| Triticum aestivum clone wpa1c.pk015.c12:fis, full... 88 3e-14
16gb|AF453836.1| Zea mays satase isoform III mRNA, complete cds 64 5e-07
17dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 52 0.002
18gb|AY618468.1| Thlaspi goesingense mitochondrial serine acetyltr... 50 0.007
19gb|AD000812.1|CH19R27740 Homo sapiens DNA from chromosome 19-cos... 44 0.42
20gb|AE006470.1| Chlorobium tepidum TLS, complete genome 44 0.42
21gb|AC002126.1|AC002126 Homo sapiens DNA from chromosome 19-cosmi... 44 0.42
22gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 1.7
23gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 1.7
24emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.7
25emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 42 1.7
26emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 42 1.7
27gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 1.7
28dbj|D49535.1|CNASAT Citrullus vulgaris mRNA for serine acetyltra... 42 1.7
29dbj|D85624.1|CNASA Citrullus lanatus serine acetyltransferase (S... 42 1.7
30dbj|AB006530.1| Citrullus lanatus Sat gene for serine acetyltran... 42 1.7
31ref|NM_187597.1| Oryza sativa (japonica cultivar-group), predic... 40 6.6
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.6
33ref|XM_534573.2| PREDICTED: Canis familiaris similar to a disint... 40 6.6
34gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.6
35gb|AC163225.4| Mus musculus chromosome 8, clone RP23-319L22, com... 40 6.6
36emb|AL445216.6| Human DNA sequence from clone RP11-204N9 on chro... 40 6.6
37gb|DQ115861.1| Cyanobacteria phage AS-1 contig_54 genomic sequence 40 6.6
38emb|AL662891.9| Mouse DNA sequence from clone RP23-20N14 on chro... 40 6.6
39emb|AL137505.1|HSM802236 Homo sapiens genomic DNA; cDNA DKFZp761... 40 6.6
40emb|AL137503.1|HSM802234 Homo sapiens genomic DNA; cDNA DKFZp761... 40 6.6
41emb|CR860123.1| Pongo pygmaeus mRNA; cDNA DKFZp459M1411 (from cl... 40 6.6
42dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.6
43dbj|AK001134.1| Homo sapiens cDNA FLJ10272 fis, clone HEMBB1001117 40 6.6
44gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, compl... 40 6.6
45gb|AC182464.2| Pan troglodytes BAC clone CH251-539C18 from chrom... 40 6.6
46emb|BX649431.16| Zebrafish DNA sequence from clone DKEYP-44B5 in... 40 6.6
47gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.6
48gb|AF395194.1|AF395194 Pseudomonas mendocina sub_clone 1 gene se... 40 6.6
49dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
50gb|AY091666.1| Pseudomonas mendocina LipA (lipA) and LipB (lipB)... 40 6.6
51gb|AC022104.3|AC022104 Homo sapiens chromosome 5 clone CTC-257B1... 40 6.6
52dbj|AK100541.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
53gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.6
54emb|AL954144.6| Zebrafish DNA sequence from clone CH211-206L15, ... 40 6.6 
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase
            IV-1 gene, complete cds
          Length = 15000

 Score =  220 bits (111), Expect = 3e-54
 Identities = 159/175 (90%)
 Strand = Plus / Plus

                                                                        
Query: 302  ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 361
            |||||||| |||| || ||||| ||||| ||||||||||| ||||||||||| || || |
Sbjct: 2245 ctcagatgctgtagtccgaccattgctggatgaaggaggtgtggtccatggattcacccg 2304

                                                                        
Query: 362  gcatgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgctcc 421
            ||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||| |||
Sbjct: 2305 gcatgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgccgtggtcc 2364

                                                                   
Query: 422  tcggcggcacgtcgatgagcaccaccgacccggcaccgatcttggccccggcgcc 476
            |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 2365 tcggcggcacgtcgatgagcaccagcgacccggccccgatcttggccccggcgcc 2419
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  220 bits (111), Expect = 3e-54
 Identities = 159/175 (90%)
 Strand = Plus / Minus

                                                                            
Query: 302      ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 361
                |||||||| |||| || ||||| ||||| ||||||||||| ||||||||||| || || |
Sbjct: 30036766 ctcagatgctgtagtccgaccattgctggatgaaggaggtgtggtccatggattcacccg 30036707

                                                                            
Query: 362      gcatgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgctcc 421
                ||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||| |||
Sbjct: 30036706 gcatgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgccgtggtcc 30036647

                                                                       
Query: 422      tcggcggcacgtcgatgagcaccaccgacccggcaccgatcttggccccggcgcc 476
                |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 30036646 tcggcggcacgtcgatgagcaccagcgacccggccccgatcttggccccggcgcc 30036592
to top
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0690B02
          Length = 153116

 Score =  220 bits (111), Expect = 3e-54
 Identities = 159/175 (90%)
 Strand = Plus / Minus

                                                                         
Query: 302   ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 361
             |||||||| |||| || ||||| ||||| ||||||||||| ||||||||||| || || |
Sbjct: 32756 ctcagatgctgtagtccgaccattgctggatgaaggaggtgtggtccatggattcacccg 32697

                                                                         
Query: 362   gcatgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgctcc 421
             ||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||| |||
Sbjct: 32696 gcatgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgccgtggtcc 32637

                                                                    
Query: 422   tcggcggcacgtcgatgagcaccaccgacccggcaccgatcttggccccggcgcc 476
             |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 32636 tcggcggcacgtcgatgagcaccagcgacccggccccgatcttggccccggcgcc 32582
to top
>dbj|AK102935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114J02, full
           insert sequence
          Length = 1157

 Score =  220 bits (111), Expect = 3e-54
 Identities = 159/175 (90%)
 Strand = Plus / Minus

                                                                       
Query: 302 ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 361
           |||||||| |||| || ||||| ||||| ||||||||||| ||||||||||| || || |
Sbjct: 894 ctcagatgctgtagtccgaccattgctggatgaaggaggtgtggtccatggattcacccg 835

                                                                       
Query: 362 gcatgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgctcc 421
           ||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||| |||
Sbjct: 834 gcatgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgccgtggtcc 775

                                                                  
Query: 422 tcggcggcacgtcgatgagcaccaccgacccggcaccgatcttggccccggcgcc 476
           |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 774 tcggcggcacgtcgatgagcaccagcgacccggccccgatcttggccccggcgcc 720
to top
>dbj|AK071186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086D18, full
           insert sequence
          Length = 1961

 Score =  220 bits (111), Expect = 3e-54
 Identities = 159/175 (90%)
 Strand = Plus / Minus

                                                                       
Query: 302 ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 361
           |||||||| |||| || ||||| ||||| ||||||||||| ||||||||||| || || |
Sbjct: 984 ctcagatgctgtagtccgaccattgctggatgaaggaggtgtggtccatggattcacccg 925

                                                                       
Query: 362 gcatgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgctcc 421
           ||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||| |||
Sbjct: 924 gcatgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgccgtggtcc 865

                                                                  
Query: 422 tcggcggcacgtcgatgagcaccaccgacccggcaccgatcttggccccggcgcc 476
           |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 864 tcggcggcacgtcgatgagcaccagcgacccggccccgatcttggccccggcgcc 810
to top
>ref|NM_191801.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 912

 Score =  218 bits (110), Expect = 1e-53
 Identities = 158/174 (90%)
 Strand = Plus / Minus

                                                                       
Query: 303 tcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctgg 362
           ||||||| |||| || ||||| ||||| ||||||||||| ||||||||||| || || ||
Sbjct: 912 tcagatgctgtagtccgaccattgctggatgaaggaggtgtggtccatggattcacccgg 853

                                                                       
Query: 363 catgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgctcct 422
           |||||||||||||||||||||||||| ||||||||| || ||||||||||| ||| ||||
Sbjct: 852 catgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgccgtggtcct 793

                                                                 
Query: 423 cggcggcacgtcgatgagcaccaccgacccggcaccgatcttggccccggcgcc 476
           ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 792 cggcggcacgtcgatgagcaccagcgacccggccccgatcttggccccggcgcc 739
to top
>dbj|AK102699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103K16, full
           insert sequence
          Length = 1188

 Score =  212 bits (107), Expect = 8e-52
 Identities = 158/175 (90%)
 Strand = Plus / Minus

                                                                       
Query: 302 ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 361
           |||||||| |||| || ||||| ||||| |||||||| || ||||||||||| || || |
Sbjct: 914 ctcagatgctgtagtccgaccattgctggatgaaggatgtgtggtccatggattcacccg 855

                                                                       
Query: 362 gcatgtcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgctcc 421
           ||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||| |||
Sbjct: 854 gcatgtcgtcgcccttcttcccgccgagcagcctcgccggattccccaccgccgtggtcc 795

                                                                  
Query: 422 tcggcggcacgtcgatgagcaccaccgacccggcaccgatcttggccccggcgcc 476
           |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 794 tcggcggcacgtcgatgagcaccagcgacccggccccgatcttggccccggcgcc 740
to top
>gb|AY108366.1| Zea mays PCO145512 mRNA sequence
          Length = 1315

 Score =  198 bits (100), Expect = 1e-47
 Identities = 159/178 (89%), Gaps = 3/178 (1%)
 Strand = Plus / Minus

                                                                       
Query: 302 ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 361
           |||| ||| |||| || ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 989 ctcaaatgatgtagtccgaccactgctgtatgaaggaggtgtggtccatggactcccccg 930

                                                                       
Query: 362 gcatg---tcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgc 418
           ||||    || |||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 929 gcatcacctcctcgcccttcttcccgccgatcagcctggcggggttccccacggcggtgc 870

                                                                     
Query: 419 tcctcggcggcacgtcgatgagcaccaccgacccggcaccgatcttggccccggcgcc 476
           |||| |||||||||||||||||||| || |||||||| |||| |||||| ||||||||
Sbjct: 869 tcctgggcggcacgtcgatgagcacgacggacccggcgccgaccttggcgccggcgcc 812
to top
>gb|AF453837.1| Zea mays satase isoform I mRNA, complete cds
          Length = 1162

 Score =  141 bits (71), Expect = 2e-30
 Identities = 124/141 (87%), Gaps = 3/141 (2%)
 Strand = Plus / Minus

                                                                       
Query: 302 ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccctg 361
           |||| ||| |||| || ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 996 ctcaaatgatgtagtccgaccactgctgtatgaaggaggtgtggtccatggactcccccg 937

                                                                       
Query: 362 gcatg---tcgtcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgc 418
           ||||    || |||||||||||||   |||||||||| |||||||||||||| |||||||
Sbjct: 936 gcatcacctcctcgcccttcttccgcgcgatcagcctggcggggttccccacggcggtgc 877

                                
Query: 419 tcctcggcggcacgtcgatga 439
           |||| ||||||||||||||||
Sbjct: 876 tcctgggcggcacgtcgatga 856
to top
>ref|XM_464531.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 897

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                       
Query: 390 cagcctcgcggggttccccaccgcggtgctcctcggcggcacgtcgatgagcaccaccga 449
           ||||||||| |||||||||||||| |||  || |||||||||||||  |||||||| |||
Sbjct: 804 cagcctcgccgggttccccaccgccgtggcccccggcggcacgtcggcgagcaccagcga 745

                                      
Query: 450 cccggcaccgatcttggccccggcgcc 476
           |||||| ||||||||||| ||||||||
Sbjct: 744 cccggccccgatcttggcgccggcgcc 718



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 307 atggtgtaatctgaccactgctgtatgaaggaggtatggtccatgga 353
           ||||||||||| ||||||| | | |||||||||| ||||||||||||
Sbjct: 893 atggtgtaatccgaccactccagcatgaaggaggcatggtccatgga 847
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                           
Query: 390     cagcctcgcggggttccccaccgcggtgctcctcggcggcacgtcgatgagcaccaccga 449
               ||||||||| |||||||||||||| |||  || |||||||||||||  |||||||| |||
Sbjct: 5748697 cagcctcgccgggttccccaccgccgtggcccccggcggcacgtcggcgagcaccagcga 5748756

                                          
Query: 450     cccggcaccgatcttggccccggcgcc 476
               |||||| ||||||||||| ||||||||
Sbjct: 5748757 cccggccccgatcttggcgccggcgcc 5748783



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                   
Query: 302     ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatgga 353
               |||| ||||||||||| ||||||| | | |||||||||| ||||||||||||
Sbjct: 5748603 ctcaaatggtgtaatccgaccactccagcatgaaggaggcatggtccatgga 5748654
to top
>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1135_F06
          Length = 102230

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                         
Query: 390   cagcctcgcggggttccccaccgcggtgctcctcggcggcacgtcgatgagcaccaccga 449
             ||||||||| |||||||||||||| |||  || |||||||||||||  |||||||| |||
Sbjct: 38211 cagcctcgccgggttccccaccgccgtggcccccggcggcacgtcggcgagcaccagcga 38270

                                        
Query: 450   cccggcaccgatcttggccccggcgcc 476
             |||||| ||||||||||| ||||||||
Sbjct: 38271 cccggccccgatcttggcgccggcgcc 38297



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 302   ctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatgga 353
             |||| ||||||||||| ||||||| | | |||||||||| ||||||||||||
Sbjct: 38117 ctcaaatggtgtaatccgaccactccagcatgaaggaggcatggtccatgga 38168
to top
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05,
              complete sequence
          Length = 196284

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 90/105 (85%)
 Strand = Plus / Plus

                                                                          
Query: 376    ttcttcccgccgatcagcctcgcggggttccccaccgcggtgctcctcggcggcacgtcg 435
              ||||||| ||| |||| ||| || || ||||||||||| ||| |||||| |||||| || 
Sbjct: 124735 ttcttcctgccaatcaacctggctggattccccaccgccgtgttcctcgccggcacatct 124794

                                                           
Query: 436    atgagcaccaccgacccggcaccgatcttggccccggcgccaatc 480
              || |||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 124795 atcagcaccactgacccggcaccaatcttggccccggctccaatc 124839
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 90/105 (85%)
 Strand = Plus / Plus

                                                                            
Query: 376      ttcttcccgccgatcagcctcgcggggttccccaccgcggtgctcctcggcggcacgtcg 435
                ||||||| ||| |||| ||| || || ||||||||||| ||| |||||| |||||| || 
Sbjct: 26273687 ttcttcctgccaatcaacctggctggattccccaccgccgtgttcctcgccggcacatct 26273746

                                                             
Query: 436      atgagcaccaccgacccggcaccgatcttggccccggcgccaatc 480
                || |||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 26273747 atcagcaccactgacccggcaccaatcttggccccggctccaatc 26273791
to top
>gb|BT008919.1| Triticum aestivum clone wpa1c.pk015.c12:fis, full insert mRNA
           sequence
          Length = 1301

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                       
Query: 370 tcgcccttcttcccgccgatcagcctcgcggggttccccaccgcggtgctcctcggcggc 429
           ||||||||| |||| ||||| ||||| || |||||||||||||| ||||||| || ||||
Sbjct: 935 tcgcccttcctccctccgatgagcctggcagggttccccaccgccgtgctccgcgccggc 876

                                                               
Query: 430 acgtcgatgagcaccaccgacccggcaccgatcttggccccggcgccaatca 481
           || || || |||||||| || || || || |||||||||||||| |||||||
Sbjct: 875 acatctatcagcaccacggagccagccccaatcttggccccggctccaatca 824



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                        
Query: 301  tctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccct 360
            |||||||||||||| || ||||||||| ||||||||||||| || ||||||||||| || 
Sbjct: 1019 tctcagatggtgtagtcggaccactgccgtatgaaggaggtgtgatccatggactctccg 960

                             
Query: 361  ggcatgtcgtcgccctt 377
            |||||||| ||| ||||
Sbjct: 959  ggcatgtcctcgtcctt 943
to top
>gb|AF453836.1| Zea mays satase isoform III mRNA, complete cds
          Length = 1225

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 301 tctcagatggtgtaatctgaccactgctgtatgaaggaggtatggtccatggactcccct 360
           ||||| |||||||| || ||||| ||  |||||||||| || || |||||||||||||||
Sbjct: 979 tctcaaatggtgtagtccgaccattgacgtatgaaggacgtgtgatccatggactcccct 920

                   
Query: 361 ggcatgtc 368
           ||||||||
Sbjct: 919 ggcatgtc 912
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 438     gagcaccaccgacccggcaccgatcttggc 467
               ||||||||||| ||||||||||||||||||
Sbjct: 1900069 gagcaccaccgccccggcaccgatcttggc 1900098
to top
>gb|AY618468.1| Thlaspi goesingense mitochondrial serine acetyltransferase mRNA,
            complete cds; nuclear gene for mitochondrial product
          Length = 1353

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 423  cggcggcacgtcgatgagcaccaccgacccggcaccgatcttggc 467
            ||||||||||||  | ||||||||||| || ||||||||||||||
Sbjct: 1089 cggcggcacgtccttcagcaccaccgagccagcaccgatcttggc 1045
to top
>gb|AD000812.1|CH19R27740 Homo sapiens DNA from chromosome 19-cosmid R27740  containing MEF2B and
             RSRFR2 genes, genomic sequence
          Length = 34877

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 17    aaagatgtcataaaaaatatct 38
             ||||||||||||||||||||||
Sbjct: 18717 aaagatgtcataaaaaatatct 18738
to top
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 460     atcttggccccggcgccaatca 481
               ||||||||||||||||||||||
Sbjct: 1347575 atcttggccccggcgccaatca 1347596
to top
>gb|AC002126.1|AC002126 Homo sapiens DNA from chromosome 19-cosmids R30102:R29350:R27740
             containing MEF2B, genomic sequence, complete sequence
          Length = 89818

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 17    aaagatgtcataaaaaatatct 38
             ||||||||||||||||||||||
Sbjct: 73658 aaagatgtcataaaaaatatct 73679
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 426     cggcacgtcgatgagcaccac 446
               |||||||||||||||||||||
Sbjct: 2278838 cggcacgtcgatgagcaccac 2278858
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 140     cggcgttgagcacggccatgc 160
               |||||||||||||||||||||
Sbjct: 2836956 cggcgttgagcacggccatgc 2836936
to top
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    cggcgttgagcacggccatgc 160
              |||||||||||||||||||||
Sbjct: 331181 cggcgttgagcacggccatgc 331161
to top
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    cggcgttgagcacggccatgc 160
              |||||||||||||||||||||
Sbjct: 299682 cggcgttgagcacggccatgc 299662
to top
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   cggcgttgagcacggccatgc 160
             |||||||||||||||||||||
Sbjct: 88112 cggcgttgagcacggccatgc 88132
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 456    accgatcttggccccggcgcc 476
              |||||||||||||||||||||
Sbjct: 977481 accgatcttggccccggcgcc 977461
to top
>dbj|D49535.1|CNASAT Citrullus vulgaris mRNA for serine acetyltransferase., complete cds
          Length = 1140

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 427 ggcacgtcgatgagcaccaccgacccggcaccgatcttggc 467
           ||||| || |||||||||||||| || || |||||||||||
Sbjct: 791 ggcacatcaatgagcaccaccgatcctgccccgatcttggc 751
to top
>dbj|D85624.1|CNASA Citrullus lanatus serine acetyltransferase (Sat) DNA, complete cds
          Length = 5729

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 427  ggcacgtcgatgagcaccaccgacccggcaccgatcttggc 467
            ||||| || |||||||||||||| || || |||||||||||
Sbjct: 4910 ggcacatcaatgagcaccaccgatcctgccccgatcttggc 4870
to top
>dbj|AB006530.1| Citrullus lanatus Sat gene for serine acetyltransferase, complete cds
            and 5'-flanking region
          Length = 7344

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 427  ggcacgtcgatgagcaccaccgacccggcaccgatcttggc 467
            ||||| || |||||||||||||| || || |||||||||||
Sbjct: 6525 ggcacatcaatgagcaccaccgatcctgccccgatcttggc 6485
to top
>ref|NM_187597.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2583

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 425  gcggcacgtcgatgagcaccaccg 448
            ||||| ||||||||||||||||||
Sbjct: 1267 gcggctcgtcgatgagcaccaccg 1244
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 425     gcggcacgtcgatgagcaccaccg 448
               ||||| ||||||||||||||||||
Sbjct: 6489458 gcggctcgtcgatgagcaccaccg 6489481
to top
>ref|XM_534573.2| PREDICTED: Canis familiaris similar to a disintegrin and
            metalloproteinase domain 7 (LOC477379), mRNA
          Length = 2678

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 88   acatctcgcaaaattacaggtaca 111
            ||||||| ||||||||||||||||
Sbjct: 1124 acatctctcaaaattacaggtaca 1101
to top
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0081P02, complete sequence
          Length = 162425

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 425   gcggcacgtcgatgagcaccaccg 448
             ||||| ||||||||||||||||||
Sbjct: 32220 gcggctcgtcgatgagcaccaccg 32243
to top
>gb|AC163225.4| Mus musculus chromosome 8, clone RP23-319L22, complete sequence
          Length = 192661

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    caaagatgtcataaaaaata 35
             ||||||||||||||||||||
Sbjct: 49739 caaagatgtcataaaaaata 49758
to top
>emb|AL445216.6| Human DNA sequence from clone RP11-204N9 on chromosome 13 Contains the
             3' end of the PCDH17 gene for protocadherin 17 (PCH68
             PCDH68), complete sequence
          Length = 99292

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 5     tgtacaaacagcaaagatgtcataaaaa 32
             |||| |||||||||| ||||||||||||
Sbjct: 91361 tgtagaaacagcaaaaatgtcataaaaa 91388
to top
>gb|DQ115861.1| Cyanobacteria phage AS-1 contig_54 genomic sequence
          Length = 1009

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 tcggcggcacgtcgatgagc 441
           ||||||||||||||||||||
Sbjct: 780 tcggcggcacgtcgatgagc 761
to top
>emb|AL662891.9| Mouse DNA sequence from clone RP23-20N14 on chromosome 11 Contains the
             Psme4 gene for proteasome (prosome, macropain) activator
             subunit 4, the Gpr75 gene for G protein-coupled receptor
             75, a novel pseudogene, a PDZ and LIM domain 1 (elfin)
             (Pdlim1) pseudogene, two novel genes, the 5' end of the
             Asb3 gene for ankyrin repeat and SOCS box-containing
             protein 3, a methyl-CpG binding domain protein 2
             interacting protein (Mbdin) pseudogene and a CpG island,
             complete sequence
          Length = 244971

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   gaaagaaagggacatgactg 245
             ||||||||||||||||||||
Sbjct: 20875 gaaagaaagggacatgactg 20894
to top
>emb|AL137505.1|HSM802236 Homo sapiens genomic DNA; cDNA DKFZp761M061 (from clone
           DKFZp761M061)
          Length = 1684

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 5   tgtacaaacagcaaagatgtcataaaaa 32
           |||| |||||||||| ||||||||||||
Sbjct: 484 tgtagaaacagcaaaaatgtcataaaaa 511
to top
>emb|AL137503.1|HSM802234 Homo sapiens genomic DNA; cDNA DKFZp761I071 (from clone
           DKFZp761I071)
          Length = 1684

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 5   tgtacaaacagcaaagatgtcataaaaa 32
           |||| |||||||||| ||||||||||||
Sbjct: 484 tgtagaaacagcaaaaatgtcataaaaa 511
to top
>emb|CR860123.1| Pongo pygmaeus mRNA; cDNA DKFZp459M1411 (from clone DKFZp459M1411)
          Length = 2412

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 5    tgtacaaacagcaaagatgtcataaaaa 32
            |||| |||||||||| ||||||||||||
Sbjct: 1224 tgtagaaacagcaaaaatgtcataaaaa 1251
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    accaccgacccggcaccgat 461
              ||||||||||||||||||||
Sbjct: 724782 accaccgacccggcaccgat 724763
to top
>dbj|AK001134.1| Homo sapiens cDNA FLJ10272 fis, clone HEMBB1001117
          Length = 2339

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 5    tgtacaaacagcaaagatgtcataaaaa 32
            |||| |||||||||| ||||||||||||
Sbjct: 1160 tgtagaaacagcaaaaatgtcataaaaa 1187
to top
>gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, complete sequence
          Length = 134319

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 263   ttacagaggaggagagtggcatct 286
             |||||||||||||||||| |||||
Sbjct: 64862 ttacagaggaggagagtgccatct 64839
to top
>gb|AC182464.2| Pan troglodytes BAC clone CH251-539C18 from chromosome 20, complete
             sequence
          Length = 162793

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 252   agtattacaggttacagaggagga 275
             |||||||||||| |||||||||||
Sbjct: 60999 agtattacaggtgacagaggagga 61022
to top
>emb|BX649431.16| Zebrafish DNA sequence from clone DKEYP-44B5 in linkage group 14,
             complete sequence
          Length = 185020

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   ggttacagaggaggagagtg 280
             ||||||||||||||||||||
Sbjct: 36345 ggttacagaggaggagagtg 36326
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    tgccggcgttgagcacggcc 156
              ||||||||||||||||||||
Sbjct: 857340 tgccggcgttgagcacggcc 857359
to top
>gb|AF395194.1|AF395194 Pseudomonas mendocina sub_clone 1 gene sequence
          Length = 876

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 tcggcggcacgtcgatgagc 441
           ||||||||||||||||||||
Sbjct: 627 tcggcggcacgtcgatgagc 608
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 425     gcggcacgtcgatgagcaccaccg 448
               ||||| ||||||||||||||||||
Sbjct: 6488671 gcggctcgtcgatgagcaccaccg 6488694
to top
>gb|AY091666.1| Pseudomonas mendocina LipA (lipA) and LipB (lipB) genes, complete
            cds; probable aspartokinase gene, partial cds; and
            unknown genes
          Length = 4482

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 422  tcggcggcacgtcgatgagc 441
            ||||||||||||||||||||
Sbjct: 3856 tcggcggcacgtcgatgagc 3875
to top
>gb|AC022104.3|AC022104 Homo sapiens chromosome 5 clone CTC-257B12, complete sequence
          Length = 160703

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 263    ttacagaggaggagagtggcatct 286
              |||||||||||||||||| |||||
Sbjct: 154392 ttacagaggaggagagtgccatct 154415
to top
>dbj|AK100541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102I04, full
           insert sequence
          Length = 2626

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 425 gcggcacgtcgatgagcaccaccg 448
           ||||| ||||||||||||||||||
Sbjct: 959 gcggctcgtcgatgagcaccaccg 936
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    accaccgacccggcaccgat 461
              ||||||||||||||||||||
Sbjct: 755258 accaccgacccggcaccgat 755239
to top
>emb|AL954144.6| Zebrafish DNA sequence from clone CH211-206L15, complete sequence
          Length = 156893

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 188  gaggcagatactttcagact 207
            ||||||||||||||||||||
Sbjct: 7122 gaggcagatactttcagact 7103


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,785,691
Number of Sequences: 3902068
Number of extensions: 3785691
Number of successful extensions: 71349
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70839
Number of HSP's gapped (non-prelim): 508
length of query: 486
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 464
effective length of database: 17,147,199,772
effective search space: 7956300694208
effective search space used: 7956300694208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top