ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OCS1_MAIZE (P24068) Ocs element-binding factor 1 (OCSBF-1) 63 4e-10
2K1199_MOUSE (Q8BI06) Protein KIAA1199 homolog precursor (Protein... 29 7.3

>OCS1_MAIZE (P24068) Ocs element-binding factor 1 (OCSBF-1)|
          Length = 151

 Score = 63.2 bits (152), Expect = 4e-10
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = -2

Query: 478 NQVLRVVEEFSGVAMDIQEECPPDDPLLRPWQI 380
           N+VLR+VEEFSGVAMDIQEE P DDPLLRPWQ+
Sbjct: 102 NEVLRLVEEFSGVAMDIQEEMPADDPLLRPWQL 134



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>K1199_MOUSE (Q8BI06) Protein KIAA1199 homolog precursor (Protein 12H19.01.T7)|
          Length = 1361

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 463 VVEEFSGVAMDIQEECPPDDPLLRPW 386
           ++  FSG +  +  ECP   P L+PW
Sbjct: 21  LLANFSGASSAVATECPDQSPELQPW 46


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,084,197
Number of Sequences: 219361
Number of extensions: 690597
Number of successful extensions: 1652
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1651
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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