ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ617794.1| Secale cereale mRNA for ocs-element binding fact... 383 e-103
2gb|AF479057.1| Triticum aestivum ocs-element binding factor 1 mR... 327 2e-86
3dbj|AB185280.1| Oryza sativa (japonica cultivar-group) OsOBF1 mR... 168 1e-38
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 168 1e-38
6emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 168 1e-38
7gb|AY103652.1| Zea mays PCO086174 mRNA sequence 129 9e-27
8gb|BT018824.1| Zea mays clone EL01N0532F03.d mRNA sequence 127 4e-26
9emb|X62745.1|ZMOCSBFA Z.mays OBF1 mRNA for ocs-element binding f... 123 6e-25
10gb|AY108024.1| Zea mays PCO086173 mRNA sequence 111 2e-21
11emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa... 98 3e-17
12gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, comp... 44 0.41
13ref|XM_655381.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.41
14gb|AC174642.2| Mus musculus BAC clone RP24-362N12 from chromosom... 44 0.41
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
16emb|AL353693.19| Human DNA sequence from clone RP11-470P21 on ch... 42 1.6
17gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.6
18dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
20dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
21dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
22gb|AC171178.2| Gallus gallus BAC clone CH261-77I20 from chromoso... 42 1.6
23gb|AC153508.2| Mus musculus 10 BAC RP23-233B6 (Roswell Park Canc... 40 6.5
24ref|NM_194322.1| Homo sapiens otoferlin (OTOF), transcript varia... 40 6.5
25ref|NM_194323.1| Homo sapiens otoferlin (OTOF), transcript varia... 40 6.5
26ref|NM_004802.2| Homo sapiens otoferlin (OTOF), transcript varia... 40 6.5
27gb|AF172282.1| Oryza sativa adh1-adh2 region 40 6.5
28ref|NM_194248.1| Homo sapiens otoferlin (OTOF), transcript varia... 40 6.5
29ref|XM_416405.1| PREDICTED: Gallus gallus similar to Epidermal g... 40 6.5
30gb|BC049635.1| Mus musculus cDNA sequence BC049635, mRNA (cDNA c... 40 6.5
31gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.5
32gb|AC113014.9| Mus musculus chromosome 10, clone RP23-174O18, co... 40 6.5
33ref|XM_972653.1| PREDICTED: Mus musculus cDNA sequence BC049635,... 40 6.5
34ref|XM_972609.1| PREDICTED: Mus musculus cDNA sequence BC049635,... 40 6.5
35ref|XM_972706.1| PREDICTED: Mus musculus cDNA sequence BC049635,... 40 6.5
36gb|AC110815.6| Mus musculus BAC clone RP23-2I10 from chromosome ... 40 6.5
37gb|AC129295.4| Mus musculus BAC clone RP24-560M23 from chromosom... 40 6.5
38ref|XM_808983.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 6.5
39ref|XM_814972.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 6.5
40gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, comple... 40 6.5
41gb|AC124708.2| Mus musculus BAC clone RP24-79O16 from 6, complet... 40 6.5
42gb|U00051.1| Caenorhabditis elegans cosmid F42G9, complete sequence 40 6.5
43gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
44gb|AC123521.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
45emb|AL139036.12| Human DNA sequence from clone RP11-285H24 on ch... 40 6.5
46ref|XM_782170.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.5
47emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.5
48emb|BX640433.1| Bordetella parapertussis strain 12822, complete ... 40 6.5
49emb|BX640413.1| Bordetella pertussis strain Tohama I, complete g... 40 6.5
50emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 6.5
51dbj|AK141954.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 6.5
52dbj|AK133100.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.5
53ref|NM_001024343.1| Rattus norvegicus similar to hypothetical pr... 40 6.5
54emb|BX931875.2| Gallus gallus finished cDNA, clone ChEST798a16 40 6.5
55dbj|AK052361.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 6.5
56dbj|AK077002.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.5
57ref|NM_064855.1| Caenorhabditis elegans F42G9.8 (F42G9.8) mRNA, ... 40 6.5
58gb|BC082005.1| Rattus norvegicus similar to hypothetical protein... 40 6.5
59dbj|AK086413.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 6.5
60dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
61gb|AC157660.2| Mus musculus BAC clone RP23-263I16 from chromosom... 40 6.5
62gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, comple... 40 6.5
63gb|AF183187.1|AF183187 Homo sapiens heart/fetal otoferlin (OTOF)... 40 6.5
64gb|AF183186.1|AF183186 Homo sapiens brain otoferlin short isofor... 40 6.5
65gb|AF183185.1|AF183185 Homo sapiens brain otoferlin long isoform... 40 6.5
66gb|AC013262.7| Homo sapiens BAC clone RP11-89C12 from 2, complet... 40 6.5
67gb|AC157472.3| Medicago truncatula chromosome 7 BAC clone mth2-4... 40 6.5
68gb|BC034531.1| Mus musculus aldehyde dehydrogenase 1 family, mem... 40 6.5
69gb|AF079526.1|AF079526 Triticum aestivum secretory protein (WAS-... 40 6.5
70gb|AC007106.6|AC007106 Homo sapiens chromosome 4 clone C0383J20 ... 40 6.5
71gb|AF107403.1|AF107403 Homo sapiens otoferlin (OTOF) mRNA, compl... 40 6.5
72gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
73gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, comple... 40 6.5
74ref|NM_177785.2| Mus musculus cDNA sequence BC049635 (BC049635),... 40 6.5
75gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complet... 40 6.5
76ref|NM_153543.1| Mus musculus aldehyde dehydrogenase 1 family, m... 40 6.5
77gb|AC136215.5| Mus musculus BAC clone RP23-148L8 from 6, complet... 40 6.5
78emb|CT030126.6| Mouse DNA sequence from clone RP23-430F12 on chr... 40 6.5
79dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.5
80emb|AL929015.3| Mouse DNA sequence from clone RP23-412F11 on chr... 40 6.5
81emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chro... 40 6.5 
>emb|AJ617794.1| Secale cereale mRNA for ocs-element binding factor 1 (obf1 gene)
          Length = 827

 Score =  383 bits (193), Expect = e-103
 Identities = 226/236 (95%), Gaps = 2/236 (0%)
 Strand = Plus / Minus

                                                                       
Query: 244 ttcttcctcttgccagccacagctcagctcctacaggggggatcttgaattattgaccca 303
           |||||||||||||||||||||||||||||||||||||||  ||| | |||||||||||||
Sbjct: 659 ttcttcctcttgccagccacagctcagctcctacagggg--atcctcaattattgaccca 602

                                                                       
Query: 304 atcatgactggatggatcagtactggagcatgtgcgtggcggtggcggcgatgggcatgg 363
           ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcatcactggagggatcagtactggagcatgtgcgtggcggtggcggcgatgggcatgg 542

                                                                       
Query: 364 cggtggcagggtaggggatctgccacggtcggagcagggggtcgtcgggcgggcactcct 423
           ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 541 cggtggcagggtacgggatctgccacggccggagcagggggtcatcgggcgggcactcct 482

                                                                   
Query: 424 cctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctggttg 479
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 481 cctggatgtccatggcgacgccgctgaactcctccacgacgcggagcacctggttg 426



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 41/43 (95%), Gaps = 1/43 (2%)
 Strand = Plus / Minus

                                                      
Query: 45  tagaacacaaccatgcatataatt-acccttattactgttaca 86
           |||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 820 tagaacacaaccatacatataattaacccttattactgttaca 778



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 104 ggacgacgacagacacttactgaaacataataa 136
           |||||||||| ||||||||||||||||||||||
Sbjct: 758 ggacgacgacggacacttactgaaacataataa 726
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>gb|AF479057.1| Triticum aestivum ocs-element binding factor 1 mRNA, partial cds
          Length = 633

 Score =  327 bits (165), Expect = 2e-86
 Identities = 183/189 (96%)
 Strand = Plus / Minus

                                                                       
Query: 291 aattattgacccaatcatgactggatggatcagtactggagcatgtgcgtggcggtggcg 350
           |||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||
Sbjct: 631 aattattgacccaatcatcaccggatcgatcagtactggagcatgtgcgtggcggtggcg 572

                                                                       
Query: 351 gcgatgggcatggcggtggcagggtaggggatctgccacggtcggagcagggggtcgtcg 410
            ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 571 tcgatgggcatggcggtggcagggtacgggatctgccacggccggagcagggggtcgtcg 512

                                                                       
Query: 411 ggcgggcactcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagc 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ggcgggcactcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagc 452

                    
Query: 471 acctggttg 479
           |||||||||
Sbjct: 451 acctggttg 443
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>dbj|AB185280.1| Oryza sativa (japonica cultivar-group) OsOBF1 mRNA for bZIP
           protein, complete cds
          Length = 1277

 Score =  168 bits (85), Expect = 1e-38
 Identities = 109/117 (93%)
 Strand = Plus / Minus

                                                                       
Query: 363 gcggtggcagggtaggggatctgccacggtcggagcagggggtcgtcgggcgggcactcc 422
           |||| ||| ||| ||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 950 gcggcggcggggcaggggatctgccatggccggagcagcgggtcgtcgggggggcactcc 891

                                                                    
Query: 423 tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctggttg 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 890 tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctcgttg 834



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 320 tcagtactggagcatgtgcgtggcgg 345
           |||||||||||||||||||| |||||
Sbjct: 969 tcagtactggagcatgtgcgcggcgg 944
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  168 bits (85), Expect = 1e-38
 Identities = 109/117 (93%)
 Strand = Plus / Minus

                                                                            
Query: 363      gcggtggcagggtaggggatctgccacggtcggagcagggggtcgtcgggcgggcactcc 422
                |||| ||| ||| ||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 23001976 gcggcggcggggcaggggatctgccatggccggagcagcgggtcgtcgggggggcactcc 23001917

                                                                         
Query: 423      tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctggttg 479
                |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 23001916 tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctcgttg 23001860



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                        
Query: 418     actcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacct 474
               ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 8766644 actcctcctggatgtccatggcgacgccgctaaactcctcgacgacgtggagcacct 8766700



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 320      tcagtactggagcatgtgcgtggcgg 345
                |||||||||||||||||||| |||||
Sbjct: 23001995 tcagtactggagcatgtgcgcggcgg 23001970
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  168 bits (85), Expect = 1e-38
 Identities = 109/117 (93%)
 Strand = Plus / Minus

                                                                            
Query: 363      gcggtggcagggtaggggatctgccacggtcggagcagggggtcgtcgggcgggcactcc 422
                |||| ||| ||| ||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 22930167 gcggcggcggggcaggggatctgccatggccggagcagcgggtcgtcgggggggcactcc 22930108

                                                                         
Query: 423      tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctggttg 479
                |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 22930107 tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctcgttg 22930051



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                        
Query: 418     actcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacct 474
               ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 8766527 actcctcctggatgtccatggcgacgccgctaaactcctcgacgacgtggagcacct 8766583



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 320      tcagtactggagcatgtgcgtggcgg 345
                |||||||||||||||||||| |||||
Sbjct: 22930186 tcagtactggagcatgtgcgcggcgg 22930161
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>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 155568

 Score =  168 bits (85), Expect = 1e-38
 Identities = 109/117 (93%)
 Strand = Plus / Minus

                                                                          
Query: 363    gcggtggcagggtaggggatctgccacggtcggagcagggggtcgtcgggcgggcactcc 422
              |||| ||| ||| ||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 111253 gcggcggcggggcaggggatctgccatggccggagcagcgggtcgtcgggggggcactcc 111194

                                                                       
Query: 423    tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctggttg 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 111193 tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctcgttg 111137



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 320    tcagtactggagcatgtgcgtggcgg 345
              |||||||||||||||||||| |||||
Sbjct: 111272 tcagtactggagcatgtgcgcggcgg 111247
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>gb|AY103652.1| Zea mays PCO086174 mRNA sequence
          Length = 1583

 Score =  129 bits (65), Expect = 9e-27
 Identities = 116/133 (87%)
 Strand = Plus / Minus

                                                                        
Query: 347  ggcggcgatgggcatggcggtggcagggtaggggatctgccacggtcggagcagggggtc 406
            |||| |||||||||||||||  || |||||||| | |||||| || || ||||| |||||
Sbjct: 1192 ggcgccgatgggcatggcggcagccgggtagggcagctgccagggacgcagcagcgggtc 1133

                                                                        
Query: 407  gtcgggcgggcactcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcg 466
            ||| | |||   |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1132 gtccgccggcatctcctcctggatgtccatggcgacgccgctgaactcctcgacgaggcg 1073

                         
Query: 467  gagcacctggttg 479
            |||||||| ||||
Sbjct: 1072 gagcacctcgttg 1060
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>gb|BT018824.1| Zea mays clone EL01N0532F03.d mRNA sequence
          Length = 1409

 Score =  127 bits (64), Expect = 4e-26
 Identities = 112/128 (87%)
 Strand = Plus / Minus

                                                                        
Query: 347  ggcggcgatgggcatggcggtggcagggtaggggatctgccacggtcggagcagggggtc 406
            |||| |||||||||||||||  || |||||||| | |||||| || || ||||| |||||
Sbjct: 1023 ggcgccgatgggcatggcggcagccgggtagggcagctgccagggacgcagcagcgggtc 964

                                                                        
Query: 407  gtcgggcgggcactcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcg 466
            ||| | |||   |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 963  gtccgccggcatctcctcctggatgtccatggcgacgccgctgaactcctcgacgaggcg 904

                    
Query: 467  gagcacct 474
            ||||||||
Sbjct: 903  gagcacct 896
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>emb|X62745.1|ZMOCSBFA Z.mays OBF1 mRNA for ocs-element binding factor 1
          Length = 1457

 Score =  123 bits (62), Expect = 6e-25
 Identities = 110/126 (87%)
 Strand = Plus / Minus

                                                                        
Query: 354  atgggcatggcggtggcagggtaggggatctgccacggtcggagcagggggtcgtcgggc 413
            |||||||||||||  || |||||||| | |||||| || || ||||| |||||||| | |
Sbjct: 1089 atgggcatggcggcagccgggtagggcagctgccagggacgcagcagcgggtcgtccgcc 1030

                                                                        
Query: 414  gggcactcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacc 473
            ||   |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1029 ggcatctcctcctggatgtccatggcgacgccgctgaactcctcgacgaggcggagcacc 970

                  
Query: 474  tggttg 479
            | ||||
Sbjct: 969  tcgttg 964
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>gb|AY108024.1| Zea mays PCO086173 mRNA sequence
          Length = 469

 Score =  111 bits (56), Expect = 2e-21
 Identities = 59/60 (98%)
 Strand = Plus / Minus

                                                                       
Query: 420 tcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctggttg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 206 tcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctcgttg 147
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>emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa0036A15 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 195500

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                      
Query: 418   actcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacct 474
             ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 75525 actcctcctggatgtccatggcgacgccgctaaactcctcgacgacgtggagcacct 75469
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>gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, complete sequence
          Length = 254081

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 250    ctcttgccagccacagctcagctcct 275
              |||| |||||||||||||||||||||
Sbjct: 223230 ctctggccagccacagctcagctcct 223205
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>ref|XM_655381.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2869.2), mRNA
          Length = 1896

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 450 aactcctcgacgacgcggagcacctg 475
           |||||||||||| |||||||||||||
Sbjct: 218 aactcctcgacgtcgcggagcacctg 193
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>gb|AC174642.2| Mus musculus BAC clone RP24-362N12 from chromosome 7, complete sequence
          Length = 144527

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 250   ctcttgccagccacagctcagctcct 275
             |||| |||||||||||||||||||||
Sbjct: 83242 ctctggccagccacagctcagctcct 83267
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 429     atgtccatggcgacgccgctg 449
               |||||||||||||||||||||
Sbjct: 4003122 atgtccatggcgacgccgctg 4003102
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>emb|AL353693.19| Human DNA sequence from clone RP11-470P21 on chromosome 9 Contains part
             of the APBA1 gene for myloid beta (A4) precursor
             protein-binding, family A, member 1 (X11) and one CpG
             island, complete sequence
          Length = 63701

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   cagccacagctcagctcctac 277
             |||||||||||||||||||||
Sbjct: 11713 cagccacagctcagctcctac 11733
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>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 429   atgtccatggcgacgccgctg 449
             |||||||||||||||||||||
Sbjct: 96246 atgtccatggcgacgccgctg 96266
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 40       atacatagaacacaaccatgcatat 64
                ||||||||||||| |||||||||||
Sbjct: 17343604 atacatagaacactaccatgcatat 17343628
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 429     atgtccatggcgacgccgctg 449
               |||||||||||||||||||||
Sbjct: 4003233 atgtccatggcgacgccgctg 4003213
to top
>dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0640E12
          Length = 167353

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 40     atacatagaacacaaccatgcatat 64
              ||||||||||||| |||||||||||
Sbjct: 148729 atacatagaacactaccatgcatat 148753
to top
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0434A03
          Length = 146505

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 40    atacatagaacacaaccatgcatat 64
             ||||||||||||| |||||||||||
Sbjct: 11828 atacatagaacactaccatgcatat 11852
to top
>gb|AC171178.2| Gallus gallus BAC clone CH261-77I20 from chromosome ul, complete
             sequence
          Length = 237797

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                          
Query: 123   ctgaaacataataataaacacaacatata 151
             |||||||| ||||||||||||||||||||
Sbjct: 48381 ctgaaaca-aataataaacacaacatata 48408
to top
>gb|AC153508.2| Mus musculus 10 BAC RP23-233B6 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  gctcttcttggttttcttcc 250
            ||||||||||||||||||||
Sbjct: 9881 gctcttcttggttttcttcc 9900
to top
>ref|NM_194322.1| Homo sapiens otoferlin (OTOF), transcript variant 3, mRNA
          Length = 5124

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cagccacagctcagctcctacagg 280
           ||||||||||||||||||| ||||
Sbjct: 391 cagccacagctcagctcctccagg 368
to top
>ref|NM_194323.1| Homo sapiens otoferlin (OTOF), transcript variant 4, mRNA
          Length = 4772

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cagccacagctcagctcctacagg 280
           ||||||||||||||||||| ||||
Sbjct: 297 cagccacagctcagctcctccagg 274
to top
>ref|NM_004802.2| Homo sapiens otoferlin (OTOF), transcript variant 2, mRNA
          Length = 4970

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cagccacagctcagctcctacagg 280
           ||||||||||||||||||| ||||
Sbjct: 297 cagccacagctcagctcctccagg 274
to top
>gb|AF172282.1| Oryza sativa adh1-adh2 region
          Length = 339485

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 340    tggcggtggcggcgatgggcatgg 363
              ||||||||||||||||||| ||||
Sbjct: 143278 tggcggtggcggcgatggggatgg 143301
to top
>ref|NM_194248.1| Homo sapiens otoferlin (OTOF), transcript variant 1, mRNA
          Length = 7172

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 257  cagccacagctcagctcctacagg 280
            ||||||||||||||||||| ||||
Sbjct: 2439 cagccacagctcagctcctccagg 2416
to top
>ref|XM_416405.1| PREDICTED: Gallus gallus similar to Epidermal growth factor receptor
            kinase substrate EPS8 (LOC418174), mRNA
          Length = 2675

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  ttcttggttttcttcctctt 254
            ||||||||||||||||||||
Sbjct: 1102 ttcttggttttcttcctctt 1083
to top
>gb|BC049635.1| Mus musculus cDNA sequence BC049635, mRNA (cDNA clone MGC:58387
           IMAGE:6774793), complete cds
          Length = 1475

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ttcttggttttcttcctctt 254
           ||||||||||||||||||||
Sbjct: 883 ttcttggttttcttcctctt 864
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 332    catgtgcgtggcggtggcggcgat 355
              ||||||||||||| ||||||||||
Sbjct: 586335 catgtgcgtggcgatggcggcgat 586358
to top
>gb|AC113014.9| Mus musculus chromosome 10, clone RP23-174O18, complete sequence
          Length = 187065

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    gctcttcttggttttcttcc 250
              ||||||||||||||||||||
Sbjct: 154014 gctcttcttggttttcttcc 154033
to top
>ref|XM_972653.1| PREDICTED: Mus musculus cDNA sequence BC049635, transcript variant
           4 (BC049635), mRNA
          Length = 1543

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ttcttggttttcttcctctt 254
           ||||||||||||||||||||
Sbjct: 779 ttcttggttttcttcctctt 760
to top
>ref|XM_972609.1| PREDICTED: Mus musculus cDNA sequence BC049635, transcript variant
           3 (BC049635), mRNA
          Length = 1544

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ttcttggttttcttcctctt 254
           ||||||||||||||||||||
Sbjct: 777 ttcttggttttcttcctctt 758
to top
>ref|XM_972706.1| PREDICTED: Mus musculus cDNA sequence BC049635, transcript variant
           2 (BC049635), mRNA
          Length = 1640

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ttcttggttttcttcctctt 254
           ||||||||||||||||||||
Sbjct: 873 ttcttggttttcttcctctt 854
to top
>gb|AC110815.6| Mus musculus BAC clone RP23-2I10 from chromosome 12, complete sequence
          Length = 186797

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/35 (91%), Gaps = 2/35 (5%)
 Strand = Plus / Plus

                                                
Query: 121   tactgaaacataataataaacacaacatatagcag 155
             |||||||||||||||  ||| ||||||||||||||
Sbjct: 99860 tactgaaacataata--aaaaacaacatatagcag 99892
to top
>gb|AC129295.4| Mus musculus BAC clone RP24-560M23 from chromosome 1, complete
            sequence
          Length = 121538

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  ataataataaacacaacata 149
            ||||||||||||||||||||
Sbjct: 3295 ataataataaacacaacata 3314
to top
>ref|XM_808983.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053511665.50) partial mRNA
          Length = 10428

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 334  tgtgcgtggcggtggcggcg 353
            ||||||||||||||||||||
Sbjct: 4944 tgtgcgtggcggtggcggcg 4925
to top
>ref|XM_814972.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053509287.140) partial mRNA
          Length = 10401

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 339  gtggcggtggcggcgatgggcatggcgg 366
            |||||||||||||||||||  |||||||
Sbjct: 4906 gtggcggtggcggcgatggcgatggcgg 4879
to top
>gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, complete sequence
          Length = 184032

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     tattactgttacaaaatagc 93
              ||||||||||||||||||||
Sbjct: 178446 tattactgttacaaaatagc 178427
to top
>gb|AC124708.2| Mus musculus BAC clone RP24-79O16 from 6, complete sequence
          Length = 171638

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    acatatggcatagttcatga 29
             ||||||||||||||||||||
Sbjct: 18096 acatatggcatagttcatga 18077
to top
>gb|U00051.1| Caenorhabditis elegans cosmid F42G9, complete sequence
          Length = 34008

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   tgaattattgacccaatcat 308
             ||||||||||||||||||||
Sbjct: 16067 tgaattattgacccaatcat 16048
to top
>gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0051B13, complete sequence
          Length = 178000

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 340   tggcggtggcggcgatgggcatgg 363
             ||||||||||||||||||| ||||
Sbjct: 77857 tggcggtggcggcgatggggatgg 77834
to top
>gb|AC123521.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0037P04, complete sequence
          Length = 139693

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 340  tggcggtggcggcgatgggcatgg 363
            ||||||||||||||||||| ||||
Sbjct: 5299 tggcggtggcggcgatggggatgg 5276
to top
>emb|AL139036.12| Human DNA sequence from clone RP11-285H24 on chromosome 13q22.1-22.3
             Contains the 5' end of the KLF12 gene for Kruppel-like
             factor 12, complete sequence
          Length = 109810

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   ttcttggttttcttcctctt 254
             ||||||||||||||||||||
Sbjct: 72449 ttcttggttttcttcctctt 72430
to top
>ref|XM_782170.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein MICAL-3
            (LOC582210), partial mRNA
          Length = 4097

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 438  gcgacgccgctgaactcctcgacg 461
            ||||||||||||| ||||||||||
Sbjct: 2003 gcgacgccgctgatctcctcgacg 1980



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 438  gcgacgccgctgaactcctcgacg 461
            ||||||||||||| ||||||||||
Sbjct: 1760 gcgacgccgctgatctcctcgacg 1737
to top
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 339    gtggcggtggcggcgatgggcatggcgg 366
              ||||||||||||| |||||||| |||||
Sbjct: 211665 gtggcggtggcggggatgggcacggcgg 211638
to top
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14
          Length = 349305

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 339    gtggcggtggcggcgatgggcatggcgg 366
              ||||||||||||| |||||||| |||||
Sbjct: 148155 gtggcggtggcggggatgggcacggcgg 148128
to top
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 339    gtggcggtggcggcgatgggcatggcgg 366
              ||||||||||||| |||||||| |||||
Sbjct: 205888 gtggcggtggcggggatgggcacggcgg 205915
to top
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    cgccgctgaactcctcgacg 461
              ||||||||||||||||||||
Sbjct: 130912 cgccgctgaactcctcgacg 130931
to top
>dbj|AK141954.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130074P12 product:Similar to
            10-formyltetrahydrofolate dehydrogenase, full insert
            sequence
          Length = 5982

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  gctcttcttggttttcttcc 250
            ||||||||||||||||||||
Sbjct: 1657 gctcttcttggttttcttcc 1638
to top
>dbj|AK133100.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930572P17 product:hypothetical
           Serine-rich region profile containing protein, full
           insert sequence
          Length = 1365

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ttcttggttttcttcctctt 254
           ||||||||||||||||||||
Sbjct: 813 ttcttggttttcttcctctt 794
to top
>ref|NM_001024343.1| Rattus norvegicus similar to hypothetical protein 4931430D02
           (LOC500445), mRNA
          Length = 1346

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ttcttggttttcttcctctt 254
           ||||||||||||||||||||
Sbjct: 735 ttcttggttttcttcctctt 716
to top
>emb|BX931875.2| Gallus gallus finished cDNA, clone ChEST798a16
          Length = 762

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ttcttggttttcttcctctt 254
           ||||||||||||||||||||
Sbjct: 758 ttcttggttttcttcctctt 739
to top
>dbj|AK052361.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330038I09 product:similar to
            10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE (EC 1.5.1.6)
            (10-FTHFDH) (FBP-CI) [Rattus norvegicus], full insert
            sequence
          Length = 3939

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  gctcttcttggttttcttcc 250
            ||||||||||||||||||||
Sbjct: 1587 gctcttcttggttttcttcc 1568
to top
>dbj|AK077002.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4931430D02 product:hypothetical protein,
           full insert sequence
          Length = 1659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ttcttggttttcttcctctt 254
           ||||||||||||||||||||
Sbjct: 892 ttcttggttttcttcctctt 873
to top
>ref|NM_064855.1| Caenorhabditis elegans F42G9.8 (F42G9.8) mRNA, complete cds
          Length = 780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 289 tgaattattgacccaatcat 308
           ||||||||||||||||||||
Sbjct: 114 tgaattattgacccaatcat 95
to top
>gb|BC082005.1| Rattus norvegicus similar to hypothetical protein 4931430D02, mRNA
           (cDNA clone MGC:94253 IMAGE:7131603), complete cds
          Length = 1346

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ttcttggttttcttcctctt 254
           ||||||||||||||||||||
Sbjct: 735 ttcttggttttcttcctctt 716
to top
>dbj|AK086413.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:D930026K06 product:weakly similar to
            10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE (EC 1.5.1.6)
            (10-FTHFDH) [Homo sapiens], full insert sequence
          Length = 3512

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  gctcttcttggttttcttcc 250
            ||||||||||||||||||||
Sbjct: 1640 gctcttcttggttttcttcc 1621
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 340     tggcggtggcggcgatgggcatgg 363
               ||||||||||||||||||| ||||
Sbjct: 5532739 tggcggtggcggcgatggggatgg 5532716
to top
>gb|AC157660.2| Mus musculus BAC clone RP23-263I16 from chromosome 1, complete sequence
          Length = 192026

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   ataataataaacacaacata 149
             ||||||||||||||||||||
Sbjct: 96762 ataataataaacacaacata 96743
to top
>gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, complete sequence
          Length = 63849

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 257   cagccacagctcagctcctacagg 280
             ||||||||||||||||||| ||||
Sbjct: 61211 cagccacagctcagctcctccagg 61234
to top
>gb|AF183187.1|AF183187 Homo sapiens heart/fetal otoferlin (OTOF) mRNA, complete cds
          Length = 4772

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cagccacagctcagctcctacagg 280
           ||||||||||||||||||| ||||
Sbjct: 297 cagccacagctcagctcctccagg 274
to top
>gb|AF183186.1|AF183186 Homo sapiens brain otoferlin short isoform (OTOF) mRNA, complete
           cds
          Length = 5124

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cagccacagctcagctcctacagg 280
           ||||||||||||||||||| ||||
Sbjct: 391 cagccacagctcagctcctccagg 368
to top
>gb|AF183185.1|AF183185 Homo sapiens brain otoferlin long isoform (OTOF) mRNA, complete cds
          Length = 7172

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 257  cagccacagctcagctcctacagg 280
            ||||||||||||||||||| ||||
Sbjct: 2439 cagccacagctcagctcctccagg 2416
to top
>gb|AC013262.7| Homo sapiens BAC clone RP11-89C12 from 2, complete sequence
          Length = 146559

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    ataataataaacacaacata 149
              ||||||||||||||||||||
Sbjct: 102509 ataataataaacacaacata 102528
to top
>gb|AC157472.3| Medicago truncatula chromosome 7 BAC clone mth2-41h16, complete
             sequence
          Length = 114287

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    aacacaaccatgcatataat 67
             ||||||||||||||||||||
Sbjct: 72460 aacacaaccatgcatataat 72441
to top
>gb|BC034531.1| Mus musculus aldehyde dehydrogenase 1 family, member L2, mRNA (cDNA
            clone MGC:19039 IMAGE:4188055), complete cds
          Length = 5959

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  gctcttcttggttttcttcc 250
            ||||||||||||||||||||
Sbjct: 1618 gctcttcttggttttcttcc 1599
to top
>gb|AF079526.1|AF079526 Triticum aestivum secretory protein (WAS-2) mRNA, complete cds
          Length = 894

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 437 ggcgacgccgctgaactcctcgacgacg 464
           ||||||||||||||  ||||||||||||
Sbjct: 304 ggcgacgccgctgatgtcctcgacgacg 277
to top
>gb|AC007106.6|AC007106 Homo sapiens chromosome 4 clone C0383J20 map 4p16, complete sequence
          Length = 172188

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     aacatatggcatagttcatg 28
             ||||||||||||||||||||
Sbjct: 65870 aacatatggcatagttcatg 65889
to top
>gb|AF107403.1|AF107403 Homo sapiens otoferlin (OTOF) mRNA, complete cds
          Length = 4970

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 cagccacagctcagctcctacagg 280
           ||||||||||||||||||| ||||
Sbjct: 297 cagccacagctcagctcctccagg 274
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 340     tggcggtggcggcgatgggcatgg 363
               ||||||||||||||||||| ||||
Sbjct: 5599216 tggcggtggcggcgatggggatgg 5599193
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>gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, complete sequence
          Length = 169193

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 248    tcctcttgccagccacagctcagctcct 275
              ||||||| ||| ||||||||||||||||
Sbjct: 123914 tcctcttcccacccacagctcagctcct 123887
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>ref|NM_177785.2| Mus musculus cDNA sequence BC049635 (BC049635), mRNA
          Length = 1659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 ttcttggttttcttcctctt 254
           ||||||||||||||||||||
Sbjct: 892 ttcttggttttcttcctctt 873
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>gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complete sequence
          Length = 191241

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 248   tcctcttgccagccacagctcagctcct 275
             ||||||| ||| ||||||||||||||||
Sbjct: 14073 tcctcttcccacccacagctcagctcct 14046
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>ref|NM_153543.1| Mus musculus aldehyde dehydrogenase 1 family, member L2 (Aldh1l2),
            mRNA
          Length = 5959

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  gctcttcttggttttcttcc 250
            ||||||||||||||||||||
Sbjct: 1618 gctcttcttggttttcttcc 1599
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>gb|AC136215.5| Mus musculus BAC clone RP23-148L8 from 6, complete sequence
          Length = 167126

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    acatatggcatagttcatga 29
             ||||||||||||||||||||
Sbjct: 94357 acatatggcatagttcatga 94338
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>emb|CT030126.6| Mouse DNA sequence from clone RP23-430F12 on chromosome 12, complete
              sequence
          Length = 208848

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/35 (91%), Gaps = 2/35 (5%)
 Strand = Plus / Plus

                                                 
Query: 121    tactgaaacataataataaacacaacatatagcag 155
              |||||||||||||||  ||| ||||||||||||||
Sbjct: 168903 tactgaaacataata--aaaaacaacatatagcag 168935
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 348     gcggcgatgggcatggcggt 367
               ||||||||||||||||||||
Sbjct: 1773687 gcggcgatgggcatggcggt 1773706
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>emb|AL929015.3| Mouse DNA sequence from clone RP23-412F11 on chromosome 2, complete
             sequence
          Length = 142296

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   ctcttcttggttttcttcct 251
             ||||||||||||||||||||
Sbjct: 97241 ctcttcttggttttcttcct 97260
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>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete
            sequence
          Length = 208030

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  ttcttggttttcttcctctt 254
            ||||||||||||||||||||
Sbjct: 7728 ttcttggttttcttcctctt 7747


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,346,203
Number of Sequences: 3902068
Number of extensions: 4346203
Number of successful extensions: 94665
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 93928
Number of HSP's gapped (non-prelim): 735
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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