ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome... 64 5e-07
2gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome... 64 5e-07
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
4dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 5e-07
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 64 5e-07
6dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
7gb|AC006776.1| Caenorhabditis elegans cosmid Y46H3C, complete se... 44 0.44
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
9dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
10dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
11emb|AL136087.12| Human DNA sequence from clone RP1-137F1 on chro... 44 0.44
12gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome ... 42 1.7
13emb|AL034488.2|CEY54G11A Caenorhabditis elegans YAC Y54G11A, com... 42 1.7
14emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chrom... 42 1.7
15gb|U21117.1|SSIGFBPII1 Sus scrofa IGF binding protein-2 (IGF) ge... 42 1.7
16gb|AC108046.3| Homo sapiens BAC clone RP11-308K2 from 4, complet... 42 1.7
17ref|NM_171052.1| Caenorhabditis elegans Y54G11A.14 (Y54G11A.14) ... 42 1.7
18dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
19emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 42 1.7
20gb|AC153488.1| Tribolium castaneum BAC T.cast_C24H10 (Clemson U... 40 6.8
21gb|AC152927.1| Tribolium castaneum BAC T.cast_C19N19 (Clemson U... 40 6.8
22gb|BC076825.1| Xenopus laevis alkylglycerone phosphate synthase,... 40 6.8
23gb|AC102866.5| Mus musculus chromosome 7, clone RP24-576L9, comp... 40 6.8
24gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, co... 40 6.8
25gb|AC163491.2| Mus musculus chromosome 7, clone RP24-176N8, comp... 40 6.8
26gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
27gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
28gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, c... 40 6.8
29gb|AC142311.1| Pan troglodytes BAC clone RP43-47I3 from 7, compl... 40 6.8
30gb|CP000001.1| Bacillus cereus E33L, complete genome 40 6.8
31emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chro... 40 6.8
32gb|AE011745.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.8
33gb|AC019163.8| Homo sapiens BAC clone RP11-87F15 from 4, complet... 40 6.8
34emb|BX294123.12| Zebrafish DNA sequence from clone DKEYP-16G7 in... 40 6.8
35dbj|AB169863.1| Macaca fascicularis brain cDNA, clone: QccE-1937... 40 6.8
36gb|AC092506.3| Homo sapiens chromosome 1 clone RP11-364B6, compl... 40 6.8
37dbj|AK033893.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 6.8
38emb|BX842703.3| Zebrafish DNA sequence from clone DKEY-13F9 in l... 40 6.8
39gb|AC104842.4| Homo sapiens BAC clone RP11-544D5 from 2, complet... 40 6.8
40gb|AC154664.2| Mus musculus BAC clone RP24-284G3 from chromosome... 40 6.8
41gb|AC008164.3| Homo sapiens BAC clone RP11-65N17 from 2, complet... 40 6.8
42emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chr... 40 6.8
43gb|AC171313.5| Mus musculus chromosome 7, clone RP23-294D10, com... 40 6.8 
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21,
              complete sequence
          Length = 146539

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 426    cacgttgcccaccgggtcgcgaagcatgtcttcataccggaggaagagcaccttcttggg 485
              |||||||| | |||| ||||| ||||| || || |||||||||||||| |||||||  ||
Sbjct: 116424 cacgttgcgcgccggctcgcgcagcatctcctcgtaccggaggaagaggaccttctccgg 116365

                                  
Query: 486    ccgcgtccggctcgcctccc 505
              |||| |||||||| ||||||
Sbjct: 116364 ccgcctccggctctcctccc 116345



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 407   tgaactccgccagcttcctcacgttgc 433
             ||||||| |||||||||||||||||||
Sbjct: 75425 tgaactcggccagcttcctcacgttgc 75399



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 408    gaactccgccagcttcctcacgttgc 433
              |||||| |||||||||||||||||||
Sbjct: 103669 gaactcggccagcttcctcacgttgc 103644
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>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10,
              complete sequence
          Length = 157609

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 426    cacgttgcccaccgggtcgcgaagcatgtcttcataccggaggaagagcaccttcttggg 485
              |||||||| | |||| ||||| ||||| || || |||||||||||||| |||||||  ||
Sbjct: 142417 cacgttgcgcgccggctcgcgcagcatctcctcgtaccggaggaagaggaccttctccgg 142358

                                  
Query: 486    ccgcgtccggctcgcctccc 505
              |||| |||||||| ||||||
Sbjct: 142357 ccgcctccggctctcctccc 142338



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 407    tgaactccgccagcttcctcacgttgc 433
              ||||||| |||||||||||||||||||
Sbjct: 101418 tgaactcggccagcttcctcacgttgc 101392



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 408    gaactccgccagcttcctcacgttgc 433
              |||||| |||||||||||||||||||
Sbjct: 129662 gaactcggccagcttcctcacgttgc 129637
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 426      cacgttgcccaccgggtcgcgaagcatgtcttcataccggaggaagagcaccttcttggg 485
                |||||||| | |||| ||||| ||||| || || |||||||||||||| |||||||  ||
Sbjct: 17387642 cacgttgcgcgccggctcgcgcagcatctcctcgtaccggaggaagaggaccttctccgg 17387583

                                    
Query: 486      ccgcgtccggctcgcctccc 505
                |||| |||||||| ||||||
Sbjct: 17387582 ccgcctccggctctcctccc 17387563



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 407      tgaactccgccagcttcctcacgttgc 433
                ||||||| |||||||||||||||||||
Sbjct: 17346494 tgaactcggccagcttcctcacgttgc 17346468



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 408      gaactccgccagcttcctcacgttgc 433
                |||||| |||||||||||||||||||
Sbjct: 17374887 gaactcggccagcttcctcacgttgc 17374862



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 314      cctccatgttcttgagagcg 333
                ||||||||||||||||||||
Sbjct: 22878489 cctccatgttcttgagagcg 22878470
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>dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H02, full
           insert sequence
          Length = 1222

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                       
Query: 426 cacgttgcccaccgggtcgcgaagcatgtcttcataccggaggaagagcaccttcttggg 485
           |||||||| | |||| ||||| ||||| || || |||||||||||||| |||||||  ||
Sbjct: 868 cacgttgcgcgccggctcgcgcagcatctcctcgtaccggaggaagaggaccttctccgg 809

                               
Query: 486 ccgcgtccggctcgcctccc 505
           |||| |||||||| ||||||
Sbjct: 808 ccgcctccggctctcctccc 789
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 426      cacgttgcccaccgggtcgcgaagcatgtcttcataccggaggaagagcaccttcttggg 485
                |||||||| | |||| ||||| ||||| || || |||||||||||||| |||||||  ||
Sbjct: 17481352 cacgttgcgcgccggctcgcgcagcatctcctcgtaccggaggaagaggaccttctccgg 17481293

                                    
Query: 486      ccgcgtccggctcgcctccc 505
                |||| |||||||| ||||||
Sbjct: 17481292 ccgcctccggctctcctccc 17481273



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 407      tgaactccgccagcttcctcacgttgc 433
                ||||||| |||||||||||||||||||
Sbjct: 17440353 tgaactcggccagcttcctcacgttgc 17440327



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 408      gaactccgccagcttcctcacgttgc 433
                |||||| |||||||||||||||||||
Sbjct: 17468597 gaactcggccagcttcctcacgttgc 17468572



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 314      cctccatgttcttgagagcg 333
                ||||||||||||||||||||
Sbjct: 23188399 cctccatgttcttgagagcg 23188380
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>dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D11, full
           insert sequence
          Length = 1225

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 407 tgaactccgccagcttcctcacgttgc 433
           ||||||| |||||||||||||||||||
Sbjct: 768 tgaactcggccagcttcctcacgttgc 742
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>gb|AC006776.1| Caenorhabditis elegans cosmid Y46H3C, complete sequence
          Length = 32263

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 369   cccagcagcttcctccttctcc 390
             ||||||||||||||||||||||
Sbjct: 12251 cccagcagcttcctccttctcc 12272
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 231      catgtggttttcccagtccccagccacgcccttcctgaagaa 272
                |||||||||  ||||||| || || |||||||||||||||||
Sbjct: 24792541 catgtggttcgcccagtcgccggcgacgcccttcctgaagaa 24792500
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>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0493C06
          Length = 158923

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 231   catgtggttttcccagtccccagccacgcccttcctgaagaa 272
             |||||||||  ||||||| || || |||||||||||||||||
Sbjct: 26992 catgtggttcgcccagtcgccggcgacgcccttcctgaagaa 26951
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>dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B04, full
            insert sequence
          Length = 1369

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 231  catgtggttttcccagtccccagccacgcccttcctgaagaa 272
            |||||||||  ||||||| || || |||||||||||||||||
Sbjct: 1014 catgtggttcgcccagtcgccggcgacgcccttcctgaagaa 973
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>emb|AL136087.12| Human DNA sequence from clone RP1-137F1 on chromosome 6p21.1-21.2,
             complete sequence
          Length = 140136

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 369   cccagcagcttcctccttctcc 390
             ||||||||||||||||||||||
Sbjct: 67466 cccagcagcttcctccttctcc 67445
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>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0043I04, complete sequence
          Length = 145191

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 175   gagcctcgcagggcgtcttcaacaatcttgtccagacgtgctgccatggccggtgtcatg 234
             |||||||||  |||||| || || ||||||||||| |  || ||||| ||||| ||||||
Sbjct: 59506 gagcctcgcgtggcgtcgtcgacgatcttgtccagcctcgccgccatcgccggcgtcatg 59447

                  
Query: 235   tggtt 239
             |||||
Sbjct: 59446 tggtt 59442



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 448   agcatgtcttcataccggaggaagagcacctt 479
             |||||||| || ||||||||||| ||||||||
Sbjct: 59230 agcatgtcctcgtaccggaggaacagcacctt 59199
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>emb|AL034488.2|CEY54G11A Caenorhabditis elegans YAC Y54G11A, complete sequence
          Length = 99415

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 371   cagcagcttcctccttctccg 391
             |||||||||||||||||||||
Sbjct: 67975 cagcagcttcctccttctccg 67955
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>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4
          Length = 313050

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    tttgaataagatggaaaataa 84
             |||||||||||||||||||||
Sbjct: 83363 tttgaataagatggaaaataa 83343
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>gb|U21117.1|SSIGFBPII1 Sus scrofa IGF binding protein-2 (IGF) gene, exon 1
          Length = 1861

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 300 gccattcttgttcacctccat 320
           |||||||||||||||||||||
Sbjct: 488 gccattcttgttcacctccat 508
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>gb|AC108046.3| Homo sapiens BAC clone RP11-308K2 from 4, complete sequence
          Length = 177483

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 52    acattgtgtttctttgaataa 72
             |||||||||||||||||||||
Sbjct: 70765 acattgtgtttctttgaataa 70785
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>ref|NM_171052.1| Caenorhabditis elegans Y54G11A.14 (Y54G11A.14) mRNA, complete cds
          Length = 1353

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 371 cagcagcttcctccttctccg 391
           |||||||||||||||||||||
Sbjct: 778 cagcagcttcctccttctccg 758
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                            
Query: 175      gagcctcgcagggcgtcttcaacaatcttgtccagacgtgctgccatggccggtgtcatg 234
                |||||||||  |||||| || || ||||||||||| |  || ||||| ||||| ||||||
Sbjct: 21713486 gagcctcgcgtggcgtcgtcgacgatcttgtccagcctcgccgccatcgccggcgtcatg 21713427

                     
Query: 235      tggtt 239
                |||||
Sbjct: 21713426 tggtt 21713422



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 448      agcatgtcttcataccggaggaagagcacctt 479
                |||||||| || ||||||||||| ||||||||
Sbjct: 21713210 agcatgtcctcgtaccggaggaacagcacctt 21713179
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>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 183    cagggcgtcttcaacaatctt 203
              |||||||||||||||||||||
Sbjct: 490278 cagggcgtcttcaacaatctt 490298
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>gb|AC153488.1| Tribolium castaneum  BAC T.cast_C24H10 (Clemson University Genomics
             Institute Tribolium castaneum BAC Library (Red Flour
             Beetle)) complete sequence
          Length = 40580

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    gatggaaaataaacacaaac 92
             ||||||||||||||||||||
Sbjct: 26591 gatggaaaataaacacaaac 26572
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>gb|AC152927.1| Tribolium castaneum  BAC T.cast_C19N19 (Clemson University Genomics
             Institute Tribolium castaneum BAC Library (Red Flour
             Beetle)) complete sequence
          Length = 137018

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    gatggaaaataaacacaaac 92
             ||||||||||||||||||||
Sbjct: 27215 gatggaaaataaacacaaac 27234
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>gb|BC076825.1| Xenopus laevis alkylglycerone phosphate synthase, mRNA (cDNA clone
           MGC:83829 IMAGE:6642910), complete cds
          Length = 3117

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 368 ccccagcagcttcctccttctccg 391
           |||||||||||||||||| |||||
Sbjct: 150 ccccagcagcttcctcctcctccg 173
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>gb|AC102866.5| Mus musculus chromosome 7, clone RP24-576L9, complete sequence
          Length = 157163

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     agatggaaaataaacacaaa 91
              ||||||||||||||||||||
Sbjct: 113653 agatggaaaataaacacaaa 113634
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>gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, complete sequence
          Length = 154206

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    tgaataagatggaaaataaa 85
             ||||||||||||||||||||
Sbjct: 74719 tgaataagatggaaaataaa 74738
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>gb|AC163491.2| Mus musculus chromosome 7, clone RP24-176N8, complete sequence
          Length = 164417

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    agatggaaaataaacacaaa 91
             ||||||||||||||||||||
Sbjct: 84733 agatggaaaataaacacaaa 84714
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>gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0088K21, complete sequence
          Length = 153239

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    cctccatgttcttgagagcg 333
              ||||||||||||||||||||
Sbjct: 138206 cctccatgttcttgagagcg 138187
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>gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0068E24, complete sequence
          Length = 141492

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   cctccatgttcttgagagcg 333
             ||||||||||||||||||||
Sbjct: 30996 cctccatgttcttgagagcg 30977
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>gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, complete sequence
          Length = 250215

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    cattgtgtttctttgaataa 72
             ||||||||||||||||||||
Sbjct: 35161 cattgtgtttctttgaataa 35180
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>gb|AC142311.1| Pan troglodytes BAC clone RP43-47I3 from 7, complete sequence
          Length = 166861

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    aagatggaaaataaacacaa 90
             ||||||||||||||||||||
Sbjct: 67250 aagatggaaaataaacacaa 67269
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 26      atttaagagtacatatatta 45
               ||||||||||||||||||||
Sbjct: 3655308 atttaagagtacatatatta 3655327
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>emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chromosome 11 Contains
            the genes for olfactory receptor MOR135-14 and -3 , two
            olfactory receptor MOR135 pseudogenes, the gene for a
            novel olfactory receptor family MOR135 member, a zinc
            finger protein pseudogene, the 5' end of the gene for a
            novel KRAB box domain containing protein and a CpG
            island, complete sequence
          Length = 194873

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 60   tttctttgaataagatggaaaata 83
            ||||||||||||| ||||||||||
Sbjct: 9128 tttctttgaataacatggaaaata 9105
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>gb|AE011745.1| Xanthomonas axonopodis pv. citri str. 306,  section 123 of 469 of the
             complete genome
          Length = 12295

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   cgaaagcgaaccccgagcct 180
             ||||||||||||||||||||
Sbjct: 12254 cgaaagcgaaccccgagcct 12235
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>gb|AC019163.8| Homo sapiens BAC clone RP11-87F15 from 4, complete sequence
          Length = 217921

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   ctgaagaaagactcattgtt 284
             ||||||||||||||||||||
Sbjct: 90192 ctgaagaaagactcattgtt 90173
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>emb|BX294123.12| Zebrafish DNA sequence from clone DKEYP-16G7 in linkage group 2, complete
              sequence
          Length = 168359

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 68     aataagatggaaaataaacacaaa 91
              ||||| ||||||||||||||||||
Sbjct: 149193 aataacatggaaaataaacacaaa 149170
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>dbj|AB169863.1| Macaca fascicularis brain cDNA, clone: QccE-19379, similar to human
           complexin 1 (CPLX1), mRNA, RefSeq: NM_006651.3
          Length = 2207

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 476 ccttcttgggccgcgtccggctcgcctc 503
           ||||||||||||||||| ||||| ||||
Sbjct: 512 ccttcttgggccgcgtcaggctcccctc 485
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>gb|AC092506.3| Homo sapiens chromosome 1 clone RP11-364B6, complete sequence
          Length = 198279

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     tgaataagatggaaaataaa 85
              ||||||||||||||||||||
Sbjct: 107664 tgaataagatggaaaataaa 107683
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>dbj|AK033893.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330111L21
           product:unclassifiable, full insert sequence
          Length = 1956

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  tccaaatttaagagtacata 40
           ||||||||||||||||||||
Sbjct: 791 tccaaatttaagagtacata 772
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>emb|BX842703.3| Zebrafish DNA sequence from clone DKEY-13F9 in linkage group 21,
             complete sequence
          Length = 208780

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   tcacctccatgttcttgaga 330
             ||||||||||||||||||||
Sbjct: 74646 tcacctccatgttcttgaga 74665
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>gb|AC104842.4| Homo sapiens BAC clone RP11-544D5 from 2, complete sequence
          Length = 150622

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 68    aataagatggaaaataaacacaaa 91
             ||||| ||||||||||||||||||
Sbjct: 59376 aataaaatggaaaataaacacaaa 59399
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>gb|AC154664.2| Mus musculus BAC clone RP24-284G3 from chromosome 14, complete sequence
          Length = 157658

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     cattgtgtttctttgaataa 72
              ||||||||||||||||||||
Sbjct: 120848 cattgtgtttctttgaataa 120867
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>gb|AC008164.3| Homo sapiens BAC clone RP11-65N17 from 2, complete sequence
          Length = 151829

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 233    tgtggttttcccagtccccagcca 256
              ||||||| ||||||||||||||||
Sbjct: 116508 tgtggttctcccagtccccagcca 116531
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>emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chromosome X, complete
              sequence
          Length = 192322

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     tccaaatttaagagtacata 40
              ||||||||||||||||||||
Sbjct: 166474 tccaaatttaagagtacata 166493
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>gb|AC171313.5| Mus musculus chromosome 7, clone RP23-294D10, complete sequence
          Length = 208997

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    agatggaaaataaacacaaa 91
             ||||||||||||||||||||
Sbjct: 99036 agatggaaaataaacacaaa 99055


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,586,528
Number of Sequences: 3902068
Number of extensions: 4586528
Number of successful extensions: 88657
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88381
Number of HSP's gapped (non-prelim): 276
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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