ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart39b05 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 282 bits (722), Expect = 4e-76 Identities = 129/137 (94%), Positives = 133/137 (97%) Frame = -1 Query: 536 VLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQ 357 VLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESD CNQ Sbjct: 168 VLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDKWCNQ 227 Query: 356 NFGWEGSWNEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWD 177 N GWEGSW++WTAAYPATRFYVGLTADDKS+QWVHPKNVYY VAPV+QKKDNYGGIMLWD Sbjct: 228 NLGWEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWD 287 Query: 176 RYFDKQTNYSSLIKYYA 126 RYFDKQTNYSSLIKYYA Sbjct: 288 RYFDKQTNYSSLIKYYA 304
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 113 bits (282), Expect = 4e-25 Identities = 63/142 (44%), Positives = 82/142 (57%), Gaps = 6/142 (4%) Frame = -1 Query: 533 LALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQN 354 LA L +N P+ LTATVRC +P + +AL T +FER+HVR Y+ D C+ N Sbjct: 165 LARNLYAYNKMYRARTPVRLTATVRCAFPDP-RMKKALDTKLFERIHVRFYD-DATCSYN 222 Query: 353 F----GWEGSWNEWTAAYPATRFYVGLTADDK--SYQWVHPKNVYYSVAPVSQKKDNYGG 192 G WN+WTA YP + Y+GL A + V K +YY + P QK NYGG Sbjct: 223 HAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGG 282 Query: 191 IMLWDRYFDKQTNYSSLIKYYA 126 IMLWDR++DKQT Y +KY+A Sbjct: 283 IMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 96.7 bits (239), Expect = 4e-20 Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Frame = -1 Query: 476 LTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEGSWNEWTAAYPATRF 297 LTAT RC YP + +ALATG+F R+HVR + D C + + SW +W AA+P ++ Sbjct: 181 LTATTRCSYPDH-RLEKALATGVFARIHVRMF-GDEQCTMSPRY--SWEKWAAAFPGSKV 236 Query: 296 YVGLTAD-DKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYS 147 Y+GL A ++ W+ K++YY + + NYGG+ ++DRYFDK+ NY+ Sbjct: 237 YIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 77.4 bits (189), Expect = 2e-14 Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 6/139 (4%) Frame = -1 Query: 533 LALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQN 354 LA L++ + G+ ++LTA +C +P G AL TG+F+ V V+ Y + C + Sbjct: 162 LARALSRIEFQQERGRKVYLTAAPQCPFPDKVP-GTALNTGLFDYVWVQFYNNPP-CQYS 219 Query: 353 FGWEG----SWNEWTAAYPATRFYVGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDNYGG 192 G SWN WT++ +T ++GL A + + P NV S + PV ++ YGG Sbjct: 220 SGNTNNLLNSWNRWTSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGG 279 Query: 191 IMLWDRYFDKQTNYSSLIK 135 +MLW +Y+D Q+ YSS IK Sbjct: 280 VMLWSKYYDDQSGYSSSIK 298
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 76.6 bits (187), Expect = 4e-14 Identities = 56/142 (39%), Positives = 76/142 (53%), Gaps = 9/142 (6%) Frame = -1 Query: 533 LALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDN----G 366 LA L++H G GK L+LTA +C +P G AL TG+F+ V V+ Y + Sbjct: 160 LARRLSEH---GQQGKKLYLTAAPQCPFPDKLLNG-ALQTGLFDYVWVQFYNNPECEFMS 215 Query: 365 CNQNFGWEGSWNEWTAAYPATRFYVGL----TADDKSYQWVHPKNVYYS-VAPVSQKKDN 201 ++NF + WN+WT+ PA + Y+GL TA Y PK V S V P + Sbjct: 216 NSENF--KRRWNQWTSI-PAKKLYIGLPAAKTAAGNGYI---PKQVLMSQVLPFLKGSSK 269 Query: 200 YGGIMLWDRYFDKQTNYSSLIK 135 YGG+MLW+R FD Q YSS I+ Sbjct: 270 YGGVMLWNRKFDVQCGYSSAIR 291
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 72.4 bits (176), Expect = 7e-13 Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 6/124 (4%) Frame = -1 Query: 491 GKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEW 324 GK ++LTA +C +P ++G AL TG+F+ V V+ Y + C + G SWN W Sbjct: 174 GKKVYLTAAPQCPFPDR-YLGTALNTGLFDYVWVQFYNNPP-CQYSSGNINNIINSWNRW 231 Query: 323 TAAYPATRFYVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNY 150 T + A + ++GL A ++ +V P + + P +K YGG+MLW +++D + Y Sbjct: 232 TTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGY 291 Query: 149 SSLI 138 SS I Sbjct: 292 SSSI 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 70.5 bits (171), Expect = 3e-12 Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 8/138 (5%) Frame = -1 Query: 524 ELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYES-----DNGCN 360 ELAK + G + ++L+A +C YP A H+ A+ TG+F+ V V+ Y + NG Sbjct: 158 ELAKA-LNGFSQQKVYLSAAPQCPYPDA-HLDSAIQTGLFDYVWVQFYNNPQCQYSNGNI 215 Query: 359 QNFGWEGSWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGI 189 N +WN+WT++ A + ++G+ A D + + P +V S V P + YGG+ Sbjct: 216 NNL--VNAWNQWTSSQ-AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGV 272 Query: 188 MLWDRYFDKQTNYSSLIK 135 M+WDR+ D Q+ YS+ IK Sbjct: 273 MIWDRFNDAQSGYSNAIK 290
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 69.3 bits (168), Expect = 6e-12 Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 7/139 (5%) Frame = -1 Query: 533 LALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYES-----DN 369 LA L+K + RG + ++LT +C +P +G AL T F+ V ++ Y + + Sbjct: 166 LARTLSKFSHRG---RKIYLTGAPQCPFPDRL-MGSALNTKRFDYVWIQFYNNPPCSYSS 221 Query: 368 GCNQNFGWEGSWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKDNYG 195 G QN SWN+WT + A +F++GL A ++ ++ P + + P +K YG Sbjct: 222 GNTQNLF--DSWNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYG 279 Query: 194 GIMLWDRYFDKQTNYSSLI 138 G+MLW +++D + YSS I Sbjct: 280 GVMLWSKFWDDKNGYSSSI 298
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 62.4 bits (150), Expect = 8e-10 Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 9/123 (7%) Frame = -1 Query: 476 LTATVRCGYPPAAHVGRALATGIFERVHVRTYES------DNGCNQNFGWEGSWNEWTAA 315 L+A +C P A H+ A+ TG+F+ V V+ Y + DN N SWN+WTA Sbjct: 174 LSAAPQCPIPDA-HLDAAIKTGLFDSVWVQFYNNPPCMFADNADNLL----SSWNQWTA- 227 Query: 314 YPATRFYVGLTADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSS 144 +P ++ Y+GL A ++ P +V S V P + NYGG+MLW + FD YS Sbjct: 228 FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAFD--NGYSD 285 Query: 143 LIK 135 IK Sbjct: 286 SIK 288
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 61.6 bits (148), Expect = 1e-09 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 6/126 (4%) Frame = -1 Query: 497 GPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFGWEG----SWN 330 G L LTA +C P A H+ A+ TG+F+ V V+ Y + C + G SWN Sbjct: 172 GFNSQLLLTAAPQCPIPDA-HLDTAIKTGLFDIVWVQFYNNPP-CQYSSGNTNDLISSWN 229 Query: 329 EWTAAYPATRFYVGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQT 156 +WT++ A + ++G+ A + P +V S V P + YGG+MLWDR+ D Q+ Sbjct: 230 QWTSSQ-AKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQS 288 Query: 155 NYSSLI 138 YS I Sbjct: 289 GYSGAI 294
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 59.3 bits (142), Expect = 7e-09 Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 5/138 (3%) Frame = -1 Query: 533 LALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQN 354 LA LA HN K ++L+A +C P A+ + A+ATG+F+ V V+ Y + C + Sbjct: 161 LARALAGHN---NGQKTVYLSAAPQCPLPDAS-LSTAIATGLFDYVWVQFYNNPP-CQYD 215 Query: 353 FGWEG---SWNEWTAAYPATRFYVGLTAD-DKSYQWVHPKNVYYS-VAPVSQKKDNYGGI 189 + SWN+WT A + ++GL A D + P + S V P + YGG+ Sbjct: 216 TSADNLLSSWNQWTTVQ-ANQIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGV 274 Query: 188 MLWDRYFDKQTNYSSLIK 135 MLW + +D + YSS IK Sbjct: 275 MLWSKAYD--SGYSSAIK 290
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 57.4 bits (137), Expect = 2e-08 Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 6/136 (4%) Frame = -1 Query: 524 ELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATGIFERVHVRTYESDNGCNQNFG- 348 ELAK + + ++LTA +C +P G AL+TG+F+ V V+ Y + C + G Sbjct: 158 ELAKTLSQFSQQRKVYLTAAPQCPFPDTWLNG-ALSTGLFDYVWVQFYNNPP-CQYSGGS 215 Query: 347 ---WEGSWNEWTAAYPATRFYVGL-TADDKSYQWVHPKNVYYS-VAPVSQKKDNYGGIML 183 + WN+W A A + ++GL A + P +V S V P+ YGG+ML Sbjct: 216 ADNLKNYWNQWNAIQ-AGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVML 274 Query: 182 WDRYFDKQTNYSSLIK 135 W +++D YSS IK Sbjct: 275 WSKFYD--NGYSSAIK 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 42.7 bits (99), Expect = 6e-04 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 11/116 (9%) Frame = -1 Query: 446 PAAHVGRALATGIFERVHVRTYESDNGCNQNFG----WEGSWNEWT-AAYPATR-FYVGL 285 P ++ A+ T F+ + VR Y +D C + G +W WT + YP + ++ L Sbjct: 193 PDEYLDNAIQTRHFDYIFVRFY-NDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLEL 251 Query: 284 TADDKSYQ---WVHPKNVYYSVAP-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 132 A + ++ P + V P + + Y GI LW+R DK+T YS ++I+Y Sbjct: 252 PASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 32.7 bits (73), Expect = 0.66 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Frame = -1 Query: 470 ATVRCGYPPAAHVGRALATGIFERVHVRTYE---SDNGCNQNFGWEGSWNEWTAAYPATR 300 A +C +P A +G L + F+ V+V+ Y S G + NF +W + T+ + Sbjct: 192 AAPQCPFPDAI-LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 299 FYVGL----TADDKSYQWVHPKNVYYSVAP-VSQKKDNYGGIMLWD 177 + TA Y P + ++ P ++ K +YGG+ +WD Sbjct: 251 IMFTVPGSSTAAGSGYV---PMSTLQTIVPSLASKYSSYGGVSVWD 293
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 31.6 bits (70), Expect = 1.5 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 8/106 (7%) Frame = -1 Query: 470 ATVRCGYPPAAHVGRALATGIFERVHVRTYE---SDNGCNQNFGWEGSWNEWTAAYPATR 300 A +C +P A +G L + F+ V+V+ Y S G + NF +W + T+ + Sbjct: 192 AAPQCPFPDAI-LGSVLNSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVK 250 Query: 299 FYVGL----TADDKSYQWVHPKNVYYSVAP-VSQKKDNYGGIMLWD 177 + TA Y P + ++ P ++ + +YGG+ +WD Sbjct: 251 IMFTIPGSPTAAGSGYV---PMSTLQTIVPSLASEYSSYGGVSVWD 293
>NIRB_KLEOX (Q06458) Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)| Length = 957 Score = 30.4 bits (67), Expect = 3.3 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -1 Query: 290 GLTADDKSYQWVH-PKNVYYSVAPVSQKKDNYGGIMLWD 177 G T +SYQW H P+ VY + + K+ GG+++ D Sbjct: 336 GRTPGCQSYQWTHGPQQVYKKIVVSADGKNLLGGVLVGD 374
>Y2906_CAUCR (Q9A4D0) UPF0276 protein CC2906| Length = 280 Score = 29.3 bits (64), Expect = 7.3 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -1 Query: 527 LELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATG 411 +E+ N G G+PLH+ VR YP A H G +++ G Sbjct: 32 VEVISENFMVGGGRPLHVIDAVRERYPVALH-GVSMSVG 69
>G6PI_NEUCR (Q7S986) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 561 Score = 28.9 bits (63), Expect = 9.5 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -1 Query: 353 FGWE----GSWNEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIM 186 FG+E G ++ W+A + YVG K H + ++ AP+ + GGI+ Sbjct: 276 FGFESWVGGRYSVWSAIGLSVALYVGYENFHKFLAGAHAMDNHFRTAPLKENIPVLGGIL 335 Query: 185 -LW-DRYFDKQTN 153 +W +++ QT+ Sbjct: 336 SVWYSNFYNAQTH 348
>ENO_DEIRA (Q9RR60) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 422 Score = 28.9 bits (63), Expect = 9.5 Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Frame = -1 Query: 476 LTATVRCGYPPAAHVGRALATGIFERVHVRTY--ESDNGCNQNFGWEGSWNEWTAAYPAT 303 L A + GY P + AL + E Y ES+ + W +WT+ YP Sbjct: 221 LEAIQQAGYEPGKDICIALDPAVTELYKDGQYHLESEGRVLSSDEMIDFWADWTSRYPIV 280 Query: 302 RFYVGLTADD 273 GL DD Sbjct: 281 SIEDGLAEDD 290
>CPSM_RANCA (Q91293) Carbamoyl-phosphate synthase [ammonia], mitochondrial| precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase I) (CPSase I) Length = 1496 Score = 28.9 bits (63), Expect = 9.5 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = +1 Query: 352 KFWLHPLSLSYVLTWTRSKIPVASARPTCAAGGYPHRTVAVRCS-GFPGP 498 +F LHP SL YV+ +++ +SA + A GYP +A + + G P P Sbjct: 697 QFALHPTSLEYVIIEVNARLSRSSALAS-KATGYPLAFIAAKIALGIPLP 745 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,925,744 Number of Sequences: 219361 Number of extensions: 1141489 Number of successful extensions: 3383 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 3283 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3367 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
