>FACD2_RAT (Q6IV68) Fanconi anemia group D2 protein homolog (Protein FACD2)|
           (FanCD2)
          Length = 1451

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
 Frame = -2

Query: 337 CMRSRNTLGLFSSHCFIPGPAMPCTHTVMETLIHAMLLEERTSRRVSPLCKYR-----AM 173
           C++ +     FS+HC +     P    + +TL H+   ++R     S LCKY        
Sbjct: 411 CIQEQLLDSTFSTHCLVLKDICPSILLLAQTLFHSQ--DQRIILFGSLLCKYAFKFFDTY 468

Query: 172 CSSAVIGVLPS-VCLQRRYHVSRLLD 98
           C   V+G L + VC      V   LD
Sbjct: 469 CQQEVVGALVTHVCSGNEAEVDAALD 494

>IDI_AGRME (Q8KP37) Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) (IPP|
           isomerase) (Isopentenyl pyrophosphate isomerase)
           (IPP:DMAPP isomerase)
          Length = 206

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -2

Query: 304 SSHCFIPGPAMPCTHTVMETLIHAMLLEERTSRRVSPLCKYRAMCSSAVI 155
           +S C  P PA P  H V       + LE R    V P  +YRA  +S ++
Sbjct: 83  NSFCGHPAPAEPLPHAVRRRAEFELGLELRDVEPVLPFFRYRATDASGIV 132

>PTC2_HUMAN (Q9Y6C5) Protein patched homolog 2 (PTC2)|
          Length = 1203

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 14/78 (17%)
 Frame = -2

Query: 334 MRSRNTLGLFSSHCFIPGPAMP-----------CTHTVMETLIHAML---LEERTSRRVS 197
           + S N +  F     +P PA+            CT   +  +  A+L   L  R  +R+ 
Sbjct: 504 LTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVFPAILSLDLRRRHCQRLD 563

Query: 196 PLCKYRAMCSSAVIGVLP 143
            LC + + CS+ VI +LP
Sbjct: 564 VLCCFSSPCSAQVIQILP 581

>DOT1L_DROME (Q8INR6) Histone-lysine N-methyltransferase, H3 lysine-79 specific|
           (EC 2.1.1.43) (Histone H3-K79 methyltransferase)
           (H3-K79-HMTase) (Protein grappa) (DOT1-like protein)
           (dDOT1L)
          Length = 1848

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +3

Query: 12  RHGRLKPGHGAHKNLRITSIHPCCKITLQSSNLDT*YRRCKQTLGSTPITAEEHMALYL 188
           R GR+K G    K+L+I  +    K T+ S++LDT      + L + P T ++ +   L
Sbjct: 582 RKGRMKKGARGRKSLKIVGLEALHKQTVLSTSLDT----MTKKLPAAPGTVDQQLTALL 636

>CATA_YERPE (Q9X6B0) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)|
           (Antigen 5)
          Length = 737

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +1

Query: 118 DTAVVNKHLAVHLLQRKNTWLCTYKGVKPDGMFFLQVAWHGSKSPLQCVYTAWQGQG 288
           D   V K +   L   ++ W   Y    P   FF+++AWHG+ +     Y  + G+G
Sbjct: 67  DLEAVKKDIKTVLTTSQDWWPADYGNYGP---FFIRMAWHGAGT-----YRIYDGRG 115

>DNM3B_HUMAN (Q9UBC3) DNA (cytosine-5)-methyltransferase 3B (EC 2.1.1.37)|
           (Dnmt3b) (DNA methyltransferase HsaIIIB) (DNA MTase
           HsaIIIB) (M.HsaIIIB)
          Length = 853

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = -2

Query: 115 VSRLLDCNVILQQGCMLVIL---RFLWAPWPGLRRPCLQKK 2
           +SR L+CN ++     +      R+ W   PG+ RP +  K
Sbjct: 710 ISRFLECNPVMIDAIKVSAAHRARYFWGNLPGMNRPVIASK 750

>FBXL6_HUMAN (Q8N531) F-box/LRR-repeat protein 6 (F-box and leucine-rich repeat|
           protein 6) (F-box protein FBL6) (FBL6A)
          Length = 539

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
 Frame = -2

Query: 262 HTVMETLIHAMLLEERTSRRVSPLCKYRAMCSSAVIGVLPSVCLQRR-YHVSRLLDCNVI 86
           H+++E+      LEE  SR       Y +  ++ +  +L S C Q +   VS  ++ N I
Sbjct: 255 HSMVESTAVVSFLEEAGSRMRKLWLTYSSQTTAILGALLGSCCPQLQVLEVSTGINRNSI 314

Query: 85  --------LQQGC----MLVILRFLWAPWP 32
                   LQ+GC    +L +L  +W P P
Sbjct: 315 PLQLPVEALQKGCPQLQVLRLLNLMWLPKP 344

>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
 Frame = -2

Query: 328 SRNTLGLFSSHCFIPGPAM--PCTHTVMETLIHAMLLEERTSRRVSPLCKYRAMCSSAVI 155
           S  T GL SS   +       P   T++ T   + ++   T+   +    + +  SS  I
Sbjct: 161 SMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVSEVVTPTTTNNWNSSSSFTSSTSSTPI 220

Query: 154 -------GVLPSVCLQRRYHVSRLLDCNVILQQGCMLVILR---FLW 44
                  G LPS   +   HV  ++ C+V +  G +L+++    FLW
Sbjct: 221 SSSYSSSGTLPSKSNKSSNHVGVVVGCSVAIPVGVVLILIGLGIFLW 267

>PF12_PIG (P51525) Prophenin-2 precursor (PF-2) (PR-2) (C12)|
           (Prophenin-1-like)
          Length = 228

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 28/95 (29%), Positives = 42/95 (44%)
 Frame = -2

Query: 286 PGPAMPCTHTVMETLIHAMLLEERTSRRVSPLCKYRAMCSSAVIGVLPSVCLQRRYHVSR 107
           PG   P + TV ET+        R +RR   LC ++   +  V   + +V L +   +  
Sbjct: 70  PGTPKPVSFTVKETVC------PRPTRRPPELCDFKE--NGRVKQCVGTVTLDQ---IKD 118

Query: 106 LLDCNVILQQGCMLVILRFLWAPWPGLRRPCLQKK 2
            LD        C   + RF W  WP LRRP L+++
Sbjct: 119 PLDIT------CNEGVRRFPWW-WPFLRRPRLRRQ 146


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,005,959
Number of Sequences: 219361
Number of extensions: 1280965
Number of successful extensions: 2668
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2668
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)