ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GID1_ORYSA (Q6L545) Gibberellin receptor GID1 (EC 3.-.-.-) (Gibb... 58 2e-08
2GI1L3_ARATH (Q940G6) Probable gibberellin receptor GID1L3 (EC 3.... 57 4e-08
3GI1L1_ARATH (Q9MAA7) Probable gibberellin receptor GID1L1 (EC 3.... 57 4e-08
4GI1L2_ARATH (Q9LYC1) Probable gibberellin receptor GID1L2 (EC 3.... 55 1e-07
5LIPS_HUMAN (Q05469) Hormone-sensitive lipase (EC 3.1.1.79) (HSL) 39 0.008
6LIPS_PIG (Q68J42) Hormone-sensitive lipase (EC 3.1.1.79) (HSL) 38 0.019
7LIPS_RAT (P15304) Hormone-sensitive lipase (EC 3.1.1.79) (HSL) 37 0.024
8LIPS_MOUSE (P54310) Hormone-sensitive lipase (EC 3.1.1.79) (HSL) 37 0.032
9LIPS_SPETR (Q9R101) Hormone-sensitive lipase (EC 3.1.1.79) (HSL) 36 0.070
10COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component... 35 0.12
11COG1_HUMAN (Q8WTW3) Conserved oligomeric Golgi complex component 1 34 0.20
12LIP2_MORS1 (P24484) Lipase 2 (EC 3.1.1.3) (Triacylglycerol lipase) 32 1.0
13BAH_STRHY (Q01109) Acetyl-hydrolase (EC 3.1.1.-) 32 1.3
14KLDC3_MOUSE (Q8VEM9) Kelch domain-containing protein 3 (Protein ... 31 2.3
15YN19_YEAST (P53835) Hypothetical 73.4 kDa protein in ERG24-MET2 ... 31 2.3
16KLDC3_RAT (Q6AYI2) Kelch domain-containing protein 3 30 3.0
17KLDC3_HUMAN (Q9BQ90) Kelch domain-containing protein 3 (Protein ... 30 3.0
18VGLM_RVFV (P03518) M polyprotein precursor [Contains: Nonstructu... 30 3.0
19ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tum... 30 3.0
20FA62A_HUMAN (Q9BSJ8) Protein FAM62A (Membrane bound C2 domain-co... 30 3.9
21PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment) 30 3.9
22PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor 30 5.0
23SAHH_RHOPA (Q6N2N5) Adenosylhomocysteinase (EC 3.3.1.1) (S-adeno... 30 5.0
24HIS8_PARDE (Q51687) Histidinol-phosphate aminotransferase (EC 2.... 30 5.0
25BMP8B_HUMAN (P34820) Bone morphogenetic protein 8B precursor (BM... 30 5.0
26BMP8A_HUMAN (Q7Z5Y6) Bone morphogenetic protein 8A precursor (BM... 30 5.0
27DLGP3_RAT (P97838) Disks large-associated protein 3 (DAP-3) (SAP... 29 6.6
28DLGP3_MOUSE (Q6PFD5) Disks large-associated protein 3 (DAP-3) (S... 29 6.6
29TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibril... 29 8.6
30TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibr... 29 8.6
31GID_MYXXA (Q9S449) tRNA uridine 5-carboxymethylaminomethyl modif... 29 8.6
32PME2_RALSO (P24791) Pectinesterase precursor (EC 3.1.1.11) (Pect... 29 8.6
33VGLM_RVFVZ (P21401) M polyprotein precursor [Contains: Nonstruct... 29 8.6

>GID1_ORYSA (Q6L545) Gibberellin receptor GID1 (EC 3.-.-.-)|
           (Gibberellin-insensitive dwarf protein 1) (Protein
           GIBBERELLIN INSENSITIVE DWARF1)
          Length = 354

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 29/70 (41%), Positives = 39/70 (55%)
 Frame = -3

Query: 512 PEGASRDHPIANPFGADSPALGSVEFPPVLVVSSGTDLLHDRTVDYAERLARMGKPLEVV 333
           PE A RDHP  NPFG +   LG + F   L++ SG DL  DR + YA+ L   G  ++VV
Sbjct: 260 PEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVV 319

Query: 332 DFPDDPHGFF 303
              +   GF+
Sbjct: 320 QCENATVGFY 329



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>GI1L3_ARATH (Q940G6) Probable gibberellin receptor GID1L3 (EC 3.-.-.-)|
           (GID1-like protein 3)
          Length = 344

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 27/70 (38%), Positives = 41/70 (58%)
 Frame = -3

Query: 512 PEGASRDHPIANPFGADSPALGSVEFPPVLVVSSGTDLLHDRTVDYAERLARMGKPLEVV 333
           PEG  R+HP  +PFG  S +L  + FP  LVV +G DL+ D  + YAE L + G+ ++++
Sbjct: 251 PEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLL 310

Query: 332 DFPDDPHGFF 303
                  GF+
Sbjct: 311 YLEQATIGFY 320



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>GI1L1_ARATH (Q9MAA7) Probable gibberellin receptor GID1L1 (EC 3.-.-.-)|
           (GID1-like protein 1)
          Length = 345

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 32/94 (34%), Positives = 48/94 (51%)
 Frame = -3

Query: 512 PEGASRDHPIANPFGADSPALGSVEFPPVLVVSSGTDLLHDRTVDYAERLARMGKPLEVV 333
           PEG  R+HP  NPF     +L  V FP  LVV +G DL+ D  + YAE L + G+ ++++
Sbjct: 253 PEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLM 312

Query: 332 DFPDDPHGFFTQEPWSETTGELIRLVSVFVADSC 231
                  GF+   P +     ++  +S FV   C
Sbjct: 313 HLEKATVGFYLL-PNNNHFHNVMDEISAFVNAEC 345



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>GI1L2_ARATH (Q9LYC1) Probable gibberellin receptor GID1L2 (EC 3.-.-.-)|
           (GID1-like protein 2)
          Length = 358

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 27/70 (38%), Positives = 37/70 (52%)
 Frame = -3

Query: 512 PEGASRDHPIANPFGADSPALGSVEFPPVLVVSSGTDLLHDRTVDYAERLARMGKPLEVV 333
           PEG  RDHP  NPFG    +L  V FP  LVV +G DL+ D  + Y + L + G  + ++
Sbjct: 253 PEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLL 312

Query: 332 DFPDDPHGFF 303
                  GF+
Sbjct: 313 YLKQATIGFY 322



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>LIPS_HUMAN (Q05469) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)|
          Length = 1076

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 23/64 (35%), Positives = 34/64 (53%)
 Frame = -3

Query: 491  HPIANPFGADSPALGSVEFPPVLVVSSGTDLLHDRTVDYAERLARMGKPLEVVDFPDDPH 312
            +P  +P  A    L S+  PPV +V+   D + D +V  A RL  +G+P+ +    D PH
Sbjct: 967  NPFMSPLLAPDSMLKSL--PPVHIVACALDPMLDDSVMLARRLRNLGQPVTLRVVEDLPH 1024

Query: 311  GFFT 300
            GF T
Sbjct: 1025 GFLT 1028



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>LIPS_PIG (Q68J42) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)|
          Length = 764

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = -3

Query: 485 IANPFGADSPALGSV--EFPPVLVVSSGTDLLHDRTVDYAERLARMGKPLEVVDFPDDPH 312
           + NPF +   A  S+    PPV +V+   D + D +V +A RL  +G+P+ +    D PH
Sbjct: 662 VKNPFMSPLLAPDSMLQTLPPVHIVACALDPMLDDSVMFARRLRSLGQPVTLHVVEDLPH 721

Query: 311 GFFT 300
           GF +
Sbjct: 722 GFLS 725



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>LIPS_RAT (P15304) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)|
          Length = 1068

 Score = 37.4 bits (85), Expect = 0.024
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
 Frame = -3

Query: 485  IANPFGAD--SPALGSVEFPPVLVVSSGTDLLHDRTVDYAERLARMGKPLEVVDFPDDPH 312
            + NPF +   +P +     PPV +V+   D + D +V +A RL  +G+P+ +    D PH
Sbjct: 974  VKNPFMSPLLAPDVMLKTLPPVHLVACALDPMLDDSVMFARRLKDLGQPVTLKVVEDLPH 1033

Query: 311  GFFTQEPWSETTGELIRLVSVFVADSCVAVAAPKT 207
            GF +       T +   L    +       AAP T
Sbjct: 1034 GFLSLAALCRETRQAAELCVQRIRLILTPPAAPLT 1068



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>LIPS_MOUSE (P54310) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)|
          Length = 759

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = -3

Query: 485 IANPFGADSPALGSV--EFPPVLVVSSGTDLLHDRTVDYAERLARMGKPLEVVDFPDDPH 312
           + NPF +   A  S+    PPV +V+   D + D +V +A RL  +G+P+ +    D PH
Sbjct: 665 VKNPFMSPLLAPDSMLKTLPPVHLVACALDPMLDDSVMFARRLRDLGQPVTLKVVEDLPH 724

Query: 311 GFFT 300
           GF +
Sbjct: 725 GFLS 728



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>LIPS_SPETR (Q9R101) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)|
          Length = 763

 Score = 35.8 bits (81), Expect = 0.070
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
 Frame = -3

Query: 491 HPIANPFGADSPALGSVEFPPVLVVSSGTDLLHDRTVDYAERLARMGKPLEVVDFPDDPH 312
           +P  +P  A    L ++  PPV +V+   D + D +  +A RL  +G+P+ +    D PH
Sbjct: 665 NPFMSPLLAPDNMLKTL--PPVHIVACALDPMLDDSXMFARRLRALGQPVTLRVVEDLPH 722

Query: 311 GFFTQEPWSETTGE-----LIRLVSVFVADSCVAVAAP 213
           GF +       T +     + R+  +    +  A AAP
Sbjct: 723 GFLSLASLCRETRQAAELCVERIRLILTPPAAAAAAAP 760



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>COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component 1 (Low|
           density lipoprotein receptor defect B-complementing
           protein)
          Length = 980

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = +1

Query: 22  HINIFKIY--CNRFSQQQRLVSSTSADEPILMHFLVVSPQLSTVSYF----VHQNKRLCT 183
           H+   ++Y  C       +L SS S   PIL  F ++  Q++  S+F    +H++K L  
Sbjct: 139 HLQATQLYLLCCHLHSLLQLDSSNSRYSPILSRFPILIRQVAAASHFRSTILHESKMLLK 198

Query: 184 CMYVLNQAVFGAATATQL 237
           C  V +QAV  A  +  L
Sbjct: 199 CQAVSDQAVAEALCSIML 216



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>COG1_HUMAN (Q8WTW3) Conserved oligomeric Golgi complex component 1|
          Length = 980

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = +1

Query: 22  HINIFKIYCNRFSQQQRLVSSTSADEPILMHFLVVSPQLSTVSYF----VHQNKRLCTCM 189
           H     + C       +L SS+S   P+L  F ++  Q++  S+F    +H++K L  C 
Sbjct: 142 HATQLYLLCCHLHSLLQLDSSSSRYSPVLSRFPILIRQVAAASHFRSTILHESKMLLKCQ 201

Query: 190 YVLNQAVFGAATATQL 237
            V +QAV  A  +  L
Sbjct: 202 GVSDQAVAEALCSIML 217



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>LIP2_MORS1 (P24484) Lipase 2 (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 433

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = -3

Query: 506 GASRDHPIANPFGADSPALGSVEFPPVLVVSSGTDLLHDRTVDYAERLARMGKPLEVVDF 327
           G  + HP+ +    D+  L      P  +V +  D+L D  + YAE L + G  ++    
Sbjct: 332 GLPQSHPLISVMHGDNTQLC-----PSYIVVAELDILRDEGLAYAELLQKEGVQVQTYTV 386

Query: 326 PDDPHGF 306
              PHGF
Sbjct: 387 LGAPHGF 393



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>BAH_STRHY (Q01109) Acetyl-hydrolase (EC 3.1.1.-)|
          Length = 299

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 18/72 (25%), Positives = 31/72 (43%)
 Frame = -3

Query: 506 GASRDHPIANPFGADSPALGSVEFPPVLVVSSGTDLLHDRTVDYAERLARMGKPLEVVDF 327
           G    HP+A+P   D   L     PP+L+     ++LHD      +   + G P+   ++
Sbjct: 208 GTDPRHPLASPAHGDLTGL-----PPLLIQVGSEEVLHDDARALEQAALKAGTPVTFEEW 262

Query: 326 PDDPHGFFTQEP 291
           P+  H +    P
Sbjct: 263 PEMFHVWHWYHP 274



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>KLDC3_MOUSE (Q8VEM9) Kelch domain-containing protein 3 (Protein Peas) (Testis|
           intracellular mediator protein)
          Length = 382

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 21/62 (33%), Positives = 29/62 (46%)
 Frame = +1

Query: 109 MHFLVVSPQLSTVSYFVHQNKRLCTCMYVLNQAVFGAATATQLSATNTLTSRISSPVVSD 288
           +H L  SP L T+        +L    Y L+Q+        +L+A  T  S IS P+VS 
Sbjct: 329 LHILDFSPSLKTLC-------KLAVIQYSLDQSCLPHDIRWELNAMTT-NSNISRPIVSS 380

Query: 289 HG 294
           HG
Sbjct: 381 HG 382



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>YN19_YEAST (P53835) Hypothetical 73.4 kDa protein in ERG24-MET2 intragenic|
           region
          Length = 661

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 25/69 (36%), Positives = 32/69 (46%)
 Frame = +1

Query: 64  QQRLVSSTSADEPILMHFLVVSPQLSTVSYFVHQNKRLCTCMYVLNQAVFGAATATQLSA 243
           Q  L SST+ D         +  Q+S  S  V  NK + T    +NQ VFG    T LS 
Sbjct: 463 QNLLKSSTAVD---------IENQMSLWS--VQTNKYINTTETNINQEVFGWINTTTLSV 511

Query: 244 TNTLTSRIS 270
            NT+ + IS
Sbjct: 512 NNTVATMIS 520



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>KLDC3_RAT (Q6AYI2) Kelch domain-containing protein 3|
          Length = 382

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 21/62 (33%), Positives = 29/62 (46%)
 Frame = +1

Query: 109 MHFLVVSPQLSTVSYFVHQNKRLCTCMYVLNQAVFGAATATQLSATNTLTSRISSPVVSD 288
           +H L  SP L T+        +L    Y L+Q+        +L+A  T  S IS P+VS 
Sbjct: 329 LHILDFSPSLKTLC-------KLAVIQYNLDQSCLPHDIRWELNAMTT-NSNISRPIVSS 380

Query: 289 HG 294
           HG
Sbjct: 381 HG 382



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>KLDC3_HUMAN (Q9BQ90) Kelch domain-containing protein 3 (Protein Peas) (Testis|
           intracellular mediator protein)
          Length = 382

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 21/62 (33%), Positives = 29/62 (46%)
 Frame = +1

Query: 109 MHFLVVSPQLSTVSYFVHQNKRLCTCMYVLNQAVFGAATATQLSATNTLTSRISSPVVSD 288
           +H L  SP L T+        +L    Y L+Q+        +L+A  T  S IS P+VS 
Sbjct: 329 LHILDFSPSLKTLC-------KLAVIQYNLDQSCLPHDIRWELNAMTT-NSNISRPIVSS 380

Query: 289 HG 294
           HG
Sbjct: 381 HG 382



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>VGLM_RVFV (P03518) M polyprotein precursor [Contains: Nonstructural protein|
           NS-M; Glycoprotein G1; Glycoprotein G2]
          Length = 1206

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
 Frame = +3

Query: 54  ILTATTTGIINECR*ADLDALSGRVASTVDCLVLRTPKQ-APLHLYVRTESSGLRRRDGD 230
           I T +T G+  +CR +    +         CL+L+  K+     L ++T SS L  R+G 
Sbjct: 701 ITTCSTEGVNTKCRLSGTALIRAGSVGAEACLMLKGVKEDQTKFLKIKTVSSELSCREGQ 760

Query: 231 AAVGDEHADEPDQLAGGLGPRLLREEPVWVVGEIH 335
           +              G + P+ L      +VGE H
Sbjct: 761 S-----------YWTGSISPKCLSSRRCHLVGECH 784



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>ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor|
           p53-binding protein 2) (p53-binding protein 2) (p53BP2)
           (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen)
          Length = 1128

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +3

Query: 306 EPVWVVGEIHDLQRLPHPRQPLRVVDGPVVQQVGAAGNDEDRRELHRAQGRAVRPERVRD 485
           EPV  V E H+ +R+P P  P +++  P +       +D D   L +    A RP + R 
Sbjct: 679 EPVSSVQENHENERIPRPLSPTKLL--PFLSNPYRNQSDADLEALRKKLSNAPRPLKKRS 736

Query: 486 RV 491
            +
Sbjct: 737 SI 738



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>FA62A_HUMAN (Q9BSJ8) Protein FAM62A (Membrane bound C2 domain-containing|
           protein)
          Length = 1104

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 492 PPDREPVRGGQPCPGLGGVPAGP 424
           P D+ P    +P PG GG PAGP
Sbjct: 23  PTDQPPAAHAKPDPGSGGQPAGP 45



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>PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment)|
          Length = 296

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/32 (56%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -2

Query: 510 GGRQQRPPDREPVRGG-QPCPGLG-GVPAGPR 421
           GG QQRPP   P  GG QP P  G   PAGP+
Sbjct: 119 GGPQQRPPQGPPPPGGPQPRPPQGPPPPAGPQ 150



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>PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor|
          Length = 261

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 510 GGRQQRPPDREPVRGG-QPCPGLGGVPAG 427
           GG QQRPP   P  GG QP P  G  P G
Sbjct: 112 GGPQQRPPQGPPPPGGPQPRPPQGPPPPG 140



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>SAHH_RHOPA (Q6N2N5) Adenosylhomocysteinase (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
          Length = 469

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 207 GLRRRDGDAAVGDEHADEPDQLAGGLGPRLLREEP 311
           GLR  +GD    D+H  E +++   L  R+L+E+P
Sbjct: 144 GLRAENGDTMFLDQHNSEEEEIFFALIKRILKEKP 178



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>HIS8_PARDE (Q51687) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 367

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 177 LHLYVRTESSGLRRRDGDAAVGDEHADEPDQLAGGLG 287
           LH Y  T+ +GLR      A+G+ H  +PD++  G+G
Sbjct: 60  LHRYPNTDHAGLR-----GAIGEVHGLDPDRIICGVG 91



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>BMP8B_HUMAN (P34820) Bone morphogenetic protein 8B precursor (BMP-8B) (BMP-8)|
           (Osteogenic protein 2) (OP-2)
          Length = 402

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 23/66 (34%), Positives = 30/66 (45%)
 Frame = +3

Query: 126 VASTVDCLVLRTPKQAPLHLYVRTESSGLRRRDGDAAVGDEHADEPDQLAGGLGPRLLRE 305
           V +  DC +L+  K   L LYV TE              D H+ +P  LAG LG R  R 
Sbjct: 199 VTAASDCWLLKRHKDLGLRLYVETE--------------DGHSVDPG-LAGLLGQRAPRS 243

Query: 306 EPVWVV 323
           +  +VV
Sbjct: 244 QQPFVV 249



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>BMP8A_HUMAN (Q7Z5Y6) Bone morphogenetic protein 8A precursor (BMP-8A)|
          Length = 402

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 23/66 (34%), Positives = 30/66 (45%)
 Frame = +3

Query: 126 VASTVDCLVLRTPKQAPLHLYVRTESSGLRRRDGDAAVGDEHADEPDQLAGGLGPRLLRE 305
           V +  DC +L+  K   L LYV TE              D H+ +P  LAG LG R  R 
Sbjct: 199 VTAASDCWLLKRHKDLGLRLYVETE--------------DGHSVDPG-LAGLLGQRAPRS 243

Query: 306 EPVWVV 323
           +  +VV
Sbjct: 244 QQPFVV 249



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>DLGP3_RAT (P97838) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 977

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 419 RRGPAGTPPSPGQGCPPRTGSRS 487
           +RGPAG  P PG G  P   S S
Sbjct: 143 QRGPAGPGPGPGSGAAPEARSES 165



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>DLGP3_MOUSE (Q6PFD5) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 977

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 419 RRGPAGTPPSPGQGCPPRTGSRS 487
           +RGPAG  P PG G  P   S S
Sbjct: 143 QRGPAGPGPGPGSGAAPEARSES 165



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>TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 751

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
 Frame = +2

Query: 422 RGPAGTPPSP----GQGCPPRTGSRSG 490
           R PA T PSP    G G PP++G RSG
Sbjct: 480 RIPAKTTPSPKTPPGSGEPPKSGERSG 506



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>TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 732

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
 Frame = +2

Query: 422 RGPAGTPPSP----GQGCPPRTGSRSG 490
           R PA T PSP    G G PP++G RSG
Sbjct: 461 RIPAKTTPSPKTPPGSGEPPKSGERSG 487



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>GID_MYXXA (Q9S449) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gid
          Length = 457

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = +3

Query: 240 GDEHADEPDQLAGGLGPRLLREEPVWVV-GEIHDLQRLPHPRQPLRVVDGPVVQQVGAAG 416
           GD  A E ++ +  +   LLR+  V +V GE+ +L             DGPVV   G   
Sbjct: 94  GDALAVERERFSAAITESLLRQPGVELVAGEVDELPE-----------DGPVVIATGPLT 142

Query: 417 NDEDRRELHRAQG 455
           +D   REL R  G
Sbjct: 143 SDALTRELERHVG 155



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>PME2_RALSO (P24791) Pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 396

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
 Frame = -3

Query: 506 GASRDHPIANPFGADSPALGSVEFPPVLVVSSGTDLLHDRTVDYAERLARMGKPLEVVDF 327
           GA+ +  +   +  +S   G  +F    +  +GT + H  T+ Y    AR+G       F
Sbjct: 237 GATNNTMVIRAYFKNSFIQGDTDF----IFGAGTAVFHGCTIQYTA--ARLGARATSYVF 290

Query: 326 -----PDDPHGFFTQEPWSETTG 273
                PD+PHGF         TG
Sbjct: 291 APSTAPDNPHGFLAINSTFNATG 313



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>VGLM_RVFVZ (P21401) M polyprotein precursor [Contains: Nonstructural protein|
           NS-M; Glycoprotein G1; Glycoprotein G2]
          Length = 1197

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
 Frame = +3

Query: 54  ILTATTTGIINECR*ADLDALSGRVASTVDCLVLRTPKQ-APLHLYVRTESSGLRRRDGD 230
           I T +T G+  +CR +    +         CL+L+  K+     L ++T SS L  R+G 
Sbjct: 701 ITTCSTEGVNTKCRLSGTALIRAGSVGAEACLMLKGVKEDQTKFLKLKTVSSELSCREGQ 760

Query: 231 AAVGDEHADEPDQLAGGLGPRLLREEPVWVVGEIH 335
           +              G   P+ L      +VGE H
Sbjct: 761 S-----------YWTGSFSPKCLSSRRCHLVGECH 784


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,636,076
Number of Sequences: 219361
Number of extensions: 1391096
Number of successful extensions: 7040
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 5835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7009
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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