ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart39a11 |
|---|---|
| Clone Library Name | barley_pub |
>COL13_CAEEL (P20631) Cuticle collagen 13 precursor| Length = 316 Score = 40.0 bits (92), Expect = 0.003 Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 4/100 (4%) Frame = -3 Query: 476 EPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPE--- 306 +P + + G PG+PG V +P P G S P G P G G +QP P P+ Sbjct: 219 QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAG-APGQPGQAGSSQPGGPGPQGDA 277 Query: 305 -AAGFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 A G G GQ A G++ GS+ D+ P AP Sbjct: 278 GAPGAPGAPGQAGAPGQDGES---GSEGACDHCPPPRTAP 314 Score = 31.6 bits (70), Expect = 1.1 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 3/98 (3%) Frame = -3 Query: 473 PRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPF--GQEPEGNGNTGVAQPTLPLPEAA 300 P + +PG PG P +P +G++ P GQ + G G A P P A Sbjct: 196 PGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPP-GSPGPA 254 Query: 299 GFGGVAGQGHAVEDVGQ-TIGFGSQPLVDNSPYDSGAP 189 G G GQ + + G G P +P +GAP Sbjct: 255 GAPGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAP 292
>COL12_CAEEL (P20630) Cuticle collagen 12 precursor| Length = 316 Score = 40.0 bits (92), Expect = 0.003 Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 4/100 (4%) Frame = -3 Query: 476 EPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPE--- 306 +P + + G PG+PG V +P P G S P G P G G +QP P P+ Sbjct: 219 QPGSNGNAGAPGAPGQVVDVPGTPGPAGPPGSPGPAG-APGQPGQAGSSQPGGPGPQGDA 277 Query: 305 -AAGFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 A G G GQ A G++ GS+ D+ P AP Sbjct: 278 GAPGAPGAPGQAGAPGQDGES---GSEGACDHCPPPRTAP 314 Score = 31.6 bits (70), Expect = 1.1 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 3/98 (3%) Frame = -3 Query: 473 PRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPF--GQEPEGNGNTGVAQPTLPLPEAA 300 P + +PG PG P +P +G++ P GQ + G G A P P A Sbjct: 196 PGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPGQVVDVPGTPGPAGPP-GSPGPA 254 Query: 299 GFGGVAGQGHAVEDVGQ-TIGFGSQPLVDNSPYDSGAP 189 G G GQ + + G G P +P +GAP Sbjct: 255 GAPGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAP 292
>NFKB2_MOUSE (Q9WTK5) Nuclear factor NF-kappa-B p100 subunit (DNA-binding factor| KBF2) [Contains: Nuclear factor NF-kappa-B p52 subunit] Length = 899 Score = 35.8 bits (81), Expect = 0.059 Identities = 28/82 (34%), Positives = 35/82 (42%) Frame = -3 Query: 422 AMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVEDVGQTI 243 A+P F++P G GS G G+ G A G+GG G G ++ Sbjct: 342 ALPTFSQPFGGGSH--------MGGGSGG---------SAGGYGGAGG--------GGSL 376 Query: 242 GFGSQPLVDNSPYDSGAPKHGC 177 GF S L N PY SGA GC Sbjct: 377 GFFSSSLAYN-PYQSGAAPMGC 397
>MBN_DROME (P52302) Protein lethal(3)malignant blood neoplasm 1 (Mbn(83))| Length = 653 Score = 34.3 bits (77), Expect = 0.17 Identities = 34/105 (32%), Positives = 42/105 (40%), Gaps = 1/105 (0%) Frame = -3 Query: 440 SPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLP-LPEAAGFGGVAGQGHAV 264 +P L SA P V ++N P G P G G+A P P+A G GG+ G G Sbjct: 399 TPLLSSATAPGISGV---TANTPTGNVPSNGG--GIAAGKAPGNPQAGGSGGIIGAGAPG 453 Query: 263 EDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIG 129 G GS + G G G G A+G SAIG Sbjct: 454 GRKVSAGGIGSGSAI-------GGVSGGSKASGNGGAIGSGSAIG 491
>SM41_HEMPU (Q26264) 41 kDa spicule matrix protein precursor (HSM41) (HPSMC)| Length = 407 Score = 33.5 bits (75), Expect = 0.29 Identities = 30/103 (29%), Positives = 35/103 (33%), Gaps = 2/103 (1%) Frame = -3 Query: 461 QHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEP-EGNGNTGVAQPTLPLPEAAGFGGV 285 Q G PG+ P F G G FG +P G G GFG Sbjct: 217 QQPGFGNQPGMGGRQPGFGNQPGMGGRQPGFGNQPGMGGRQPGFGNQPGVGGRQPGFGNQ 276 Query: 284 AGQGHAVEDVGQTIGFGSQPLV-DNSPYDSGAPKHGCSLLGIG 159 G G G+ GFG+QP V P P G G+G Sbjct: 277 PGMG------GRQPGFGNQPGVGGRQPGFGNQPGMGGQQPGVG 313
>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 33.5 bits (75), Expect = 0.29 Identities = 34/108 (31%), Positives = 40/108 (37%), Gaps = 16/108 (14%) Frame = -3 Query: 464 AQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG-NGNTGVAQPTLP--------- 315 A H G+PG PG+ + P EP G L Q P G G TG + P P Sbjct: 464 AGHKGLPGLPGVPGLLGPKGEPGIPGDQGL---QGPPGIPGITGPSGPIGPPGIPGPKGE 520 Query: 314 --LPEAAGFGGVAGQG----HAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 LP GF GV G H +G QP + P G P Sbjct: 521 PGLPGPPGFPGVGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPP 568
>NFKB2_HUMAN (Q00653) Nuclear factor NF-kappa-B p100 subunit (DNA-binding factor| KBF2) (H2TF1) (Lymphocyte translocation chromosome 10) (Oncogene Lyt-10) (Lyt10) [Contains: Nuclear factor NF-kappa-B p52 subunit] Length = 899 Score = 33.1 bits (74), Expect = 0.38 Identities = 27/82 (32%), Positives = 34/82 (41%) Frame = -3 Query: 422 AMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVEDVGQTI 243 A+P F++P G GS G G+ G A G+GG G G ++ Sbjct: 342 ALPTFSQPFGGGSHM--------GGGSGGAA---------GGYGGAGGGG--------SL 376 Query: 242 GFGSQPLVDNSPYDSGAPKHGC 177 GF L SPY SGA GC Sbjct: 377 GFFPSSLA-YSPYQSGAGPMGC 397
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 33.1 bits (74), Expect = 0.38 Identities = 20/63 (31%), Positives = 30/63 (47%) Frame = -3 Query: 305 AAGFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIGM 126 ++G G VA QG +T GFG+ P+ + P G+P G + G A +S +G Sbjct: 1948 SSGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFG-GVPAFGSAPAFTSPLGS 2006 Query: 125 ALG 117 G Sbjct: 2007 TGG 2009
>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF| Length = 1097 Score = 33.1 bits (74), Expect = 0.38 Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 9/95 (9%) Frame = -3 Query: 446 PGSPGLVS---AMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGF---GGV 285 PG P VS PP PV S+ PFG P G P+ GF G Sbjct: 98 PGGPPQVSQPGGFPPVGRPVAPPSNQPPFGGRPSTGPLVGGGS---SFPQPGGFPASGPP 154 Query: 284 AGQGHAVEDVGQTIGFGSQPLVD---NSPYDSGAP 189 G + IGFGS P + + P SG P Sbjct: 155 GGVPSGPPSGARPIGFGSPPPMGPGMSMPPPSGMP 189
>BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 precursor| Length = 1572 Score = 32.7 bits (73), Expect = 0.50 Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 11/86 (12%) Frame = -1 Query: 475 SRAPRNTAGCPAHPVW---------SRQC-RPSRSRLGMEAATC-PLDRNQKATAIPV*H 329 +R N+A CP H VW SR C R SRSR+ TC P KA P Sbjct: 340 TRPCNNSATCPVHGVWEEWGSWSLCSRSCGRGSRSRM----RTCVPPQHGGKACEGPELQ 395 Query: 328 SPLCRCQKRQGSVVSLGRGMQWRTWG 251 + LC + G+ ++W WG Sbjct: 396 TKLC----SMAACPVEGQWLEWGPWG 417
>NUPL2_BRARE (Q6P0U9) Nucleoporin-like 2| Length = 414 Score = 32.7 bits (73), Expect = 0.50 Identities = 25/69 (36%), Positives = 29/69 (42%) Frame = -3 Query: 431 LVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVEDVG 252 L S+ PP + P G GS FG G GNT ++ P AGFGG Sbjct: 195 LKSSSPPASAP-GFGSPGPGFGSATSGFGNTSLSSP------PAGFGGA----------- 236 Query: 251 QTIGFGSQP 225 GFGS P Sbjct: 237 ---GFGSGP 242 Score = 31.6 bits (70), Expect = 1.1 Identities = 30/99 (30%), Positives = 35/99 (35%), Gaps = 8/99 (8%) Frame = -3 Query: 395 GHGSSNLPFGQEPEGNGNTGVAQPTLPL--------PEAAGFGGVAGQGHAVEDVGQTIG 240 G GSS F Q G GN + + P A GFG +G GQ G Sbjct: 267 GFGSS--AFAQPSSGFGNPAPSAASFSFAAADSESKPSAGGFGSASGFSFKTATAGQGSG 324 Query: 239 FGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIGMA 123 FGS G+ S G G + G SA G A Sbjct: 325 FGS---------GFGSSSGFGSSSGFGSSSGFGSAFGSA 354
>COL40_CAEEL (P34804) Cuticle collagen 40| Length = 306 Score = 32.7 bits (73), Expect = 0.50 Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 2/90 (2%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGN-GNTGVAQPTLPLPEA-AGFGGVAG 279 G PG+PG V+ P P G P G P GN G+ G ++P P AG G G Sbjct: 217 GNPGAPGQVTETPGTPGPAGAAGPPGPPG--PAGNPGSAGASEPGPAGPAGDAGPDGAPG 274 Query: 278 QGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 A G+ GS D+ P AP Sbjct: 275 NAGAPGAPGEAGAPGSGGGCDHCPPPRTAP 304
>ECP40_DAUCA (Q07322) Embryogenic cell protein 40 (ECP40)| Length = 306 Score = 32.3 bits (72), Expect = 0.65 Identities = 35/113 (30%), Positives = 41/113 (36%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQG 273 G+ G+ GL A A HG S+ G G G TGV G G G G Sbjct: 66 GVAGAAGLAGAT---AAAATHGGSH--GGTGTHGVGPTGVGAAH------GGTGTTTGLG 114 Query: 272 HAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIGMALGL 114 GQT G G P G HG GIG A G + +G G+ Sbjct: 115 TGTGTTGQTHGMG--------PTGIGGT-HGVGSTGIGGAHGGTGVLGQTHGM 158
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 32.3 bits (72), Expect = 0.65 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 6/93 (6%) Frame = -3 Query: 446 PGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEA----AGFGGVAG 279 PG+P A P P G N PF GN G+A+P+ P P+ G GG G Sbjct: 202 PGAP----AQRPGGRPGGPRPGNNPF----TSGGNAGMARPSAPRPQGGPRPGGPGGAPG 253 Query: 278 QGHAVEDVGQTIGFGSQPLV--DNSPYDSGAPK 186 G + G G G +P N P P+ Sbjct: 254 GGPRPQGPGGQ-GGGPRPQAPGGNRPSPGSMPR 285
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 32.3 bits (72), Expect = 0.65 Identities = 30/92 (32%), Positives = 32/92 (34%), Gaps = 4/92 (4%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGN----GNTGVAQPTLPLPEAAGFGGV 285 G+PG G M P P G LP GN G+ G P P P AGF G Sbjct: 132 GVPGEDGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGP-PGTAGFPGS 190 Query: 284 AGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 G V G SP SGAP Sbjct: 191 PGAKGEVGPAG-------------SPGSSGAP 209 Score = 30.8 bits (68), Expect = 1.9 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-----EPEGNGNTGVAQPTLPLPEAAGFGG 288 G+PG+PGL+ A P P G++ +P GQ EP NG G P E AG G Sbjct: 246 GIPGAPGLIGARGPPGPP---GTNGVP-GQRGAAGEPGKNGAKGDPGPRGERGE-AGSPG 300 Query: 287 VAG 279 +AG Sbjct: 301 IAG 303 Score = 30.4 bits (67), Expect = 2.5 Identities = 24/64 (37%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ--EPEGNGNTGVAQPTLPLPEAAGFGGVAG 279 G PGSPG + P P GSS P GQ EP G+ G P P GG Sbjct: 186 GFPGSPGAKGEVGPAGSP---GSSGAP-GQRGEPGPQGHAGAPGPPGPPGSDGSPGGKGE 241 Query: 278 QGHA 267 G A Sbjct: 242 MGPA 245 Score = 29.3 bits (64), Expect = 5.5 Identities = 27/96 (28%), Positives = 35/96 (36%) Frame = -3 Query: 476 EPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAG 297 EP H G PG PG PP ++ G + P G G P P G Sbjct: 214 EPGPQGHAGAPGPPG-----PPGSDGSPGGKGEMGPAGIPGAPGLIGARGP----PGPPG 264 Query: 296 FGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 GV GQ A + G+ G P ++G+P Sbjct: 265 TNGVPGQRGAAGEPGKN-GAKGDPGPRGERGEAGSP 299
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 32.0 bits (71), Expect = 0.85 Identities = 40/127 (31%), Positives = 47/127 (37%), Gaps = 19/127 (14%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLP-------------L 312 G PG PG P EP G L G+ GV QP LP L Sbjct: 175 GAPGPPGFRGEPGPQGEPGPRGDRGL--------KGDNGVGQPGLPGAPGQAGAPGPPGL 226 Query: 311 PEAAGFG--GVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGA--PKHGCSLLGIGV--AL 150 P AG G G+ G A D G + P V S + GA PK + G+G+ A Sbjct: 227 PGPAGLGKPGLDGIPGAPGDKGDS----GPPGVPGSRGEPGAVGPKGPPGVDGVGIPGAA 282 Query: 149 GVSSAIG 129 GV G Sbjct: 283 GVPGPQG 289
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 31.6 bits (70), Expect = 1.1 Identities = 31/90 (34%), Positives = 37/90 (41%), Gaps = 2/90 (2%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEA-AGFGGVAG- 279 G+PG PGL A+ P PV P G G+ P LP P+ AGF G G Sbjct: 701 GLPGLPGLPGAVGPMGPPVPESQ------LRPGPPGKDGL--PGLPGPKGEAGFPGAPGL 752 Query: 278 QGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 QG A G P + +P GAP Sbjct: 753 QGPA--------GLPGLPGMKGNPGLPGAP 774 Score = 30.8 bits (68), Expect = 1.9 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLP-LPEAAGFGGVAGQ 276 G+PG PG+ P P G + + P G+ G+ P +P LP G G G+ Sbjct: 136 GLPGPPGMPGFPGPPGVPGMKGEPAIGYAGAPGEKGDAGM--PGMPGLPGPPGRDGFPGE 193 Query: 275 GHAVEDVGQ 249 DVGQ Sbjct: 194 KGDRGDVGQ 202 Score = 30.0 bits (66), Expect = 3.2 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 11/69 (15%) Frame = -3 Query: 452 GMPGSPGLVSA--MPPFAEPVGH-GSSNLPFGQEPEG-------NGNTGVAQPTLP-LPE 306 G+PG PG+V A +P P G G + LP +G G G QP +P LP Sbjct: 636 GLPGKPGIVGAPGLPGPPGPKGEPGLTGLPEKPGKDGIPGLPGLKGEPGYGQPGMPGLPG 695 Query: 305 AAGFGGVAG 279 G G+ G Sbjct: 696 MKGDAGLPG 704
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 31.6 bits (70), Expect = 1.1 Identities = 22/58 (37%), Positives = 24/58 (41%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAG 279 G+PG PG P EP G L G+ GV QP LP A G GG G Sbjct: 179 GVPGPPGFQGEPGPQGEPGPPGDRGL--------KGDNGVGQP--GLPGAPGQGGAPG 226
>ABL1_HUMAN (P00519) Proto-oncogene tyrosine-protein kinase ABL1 (EC 2.7.10.2)| (p150) (c-ABL) (Abelson murine leukemia viral oncogene homolog 1) Length = 1130 Score = 31.6 bits (70), Expect = 1.1 Identities = 19/67 (28%), Positives = 28/67 (41%) Frame = -2 Query: 432 SGLGNAALRGAGWAWKQQPALWTGTRRQRQYRCSTAHSAAARSGRVRWCRWAGACSGGRG 253 +G+ N ALR +G + + P LW + R +T S R+ R A G Sbjct: 666 AGVPNGALRESGGSGFRSPHLWKKSSTLTSSRLATGEEEGGGSSSKRFLRSCSASCVPHG 725 Query: 252 ADDWIWQ 232 A D W+ Sbjct: 726 AKDTEWR 732
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 31.6 bits (70), Expect = 1.1 Identities = 29/92 (31%), Positives = 32/92 (34%), Gaps = 4/92 (4%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGN----GNTGVAQPTLPLPEAAGFGGV 285 G+PG G M P P G LP GN G+ G P P P AGF G Sbjct: 287 GLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGP-PGTAGFPGS 345 Query: 284 AGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 G V G P + SP G P Sbjct: 346 PGAKGEVGPAG-------SPGSNGSPGQRGEP 370 Score = 29.6 bits (65), Expect = 4.2 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 2/64 (3%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ--EPEGNGNTGVAQPTLPLPEAAGFGGVAG 279 G PGSPG + P P +GS GQ EP G+ G P P GG Sbjct: 341 GFPGSPGAKGEVGPAGSPGSNGSP----GQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGE 396 Query: 278 QGHA 267 G A Sbjct: 397 MGPA 400
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 31.6 bits (70), Expect = 1.1 Identities = 29/92 (31%), Positives = 32/92 (34%), Gaps = 4/92 (4%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGN----GNTGVAQPTLPLPEAAGFGGV 285 G+PG G M P P G LP GN G+ G P P P AGF G Sbjct: 287 GLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGP-PGTAGFPGS 345 Query: 284 AGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 G V G P + SP G P Sbjct: 346 PGAKGEVGPAG-------SPGSNGSPGQRGEP 370 Score = 29.6 bits (65), Expect = 4.2 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 2/64 (3%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ--EPEGNGNTGVAQPTLPLPEAAGFGGVAG 279 G PGSPG + P P +GS GQ EP G+ G P P GG Sbjct: 341 GFPGSPGAKGEVGPAGSPGSNGSP----GQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGE 396 Query: 278 QGHA 267 G A Sbjct: 397 MGPA 400 Score = 29.3 bits (64), Expect = 5.5 Identities = 20/58 (34%), Positives = 28/58 (48%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAG 279 G+PG+PGL+ A P P G++ +P + P G A+ P A G G AG Sbjct: 401 GIPGAPGLIGARGP---PGPAGTNGIPGTRGPSGEPGKNGAKGE---PGARGERGEAG 452
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 31.2 bits (69), Expect = 1.4 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Frame = -3 Query: 395 GHGSSNLPFGQEP-EGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVEDVGQTIGFGSQPLV 219 G G + GQ P G +G Q GFG + G V G + GFG Sbjct: 412 GRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHE-- 469 Query: 218 DNSPYDSGAPKHG 180 +S + SG +HG Sbjct: 470 SSSEHSSGYTQHG 482
>KCD12_MOUSE (Q6WVG3) Potassium channel tetramerisation domain-containing| protein 12 (Pfetin) (Predominantly fetal expressed T1 domain) Length = 327 Score = 31.2 bits (69), Expect = 1.4 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 8/73 (10%) Frame = -3 Query: 473 PRAAQHCGMPGSPGLVSAMPPFAEPVGH-----GSSNLPFGQ---EPEGNGNTGVAQPTL 318 P + G P PG PP + H G LP G EP+ + G PTL Sbjct: 123 PELVRRLGAPQQPG-PGPPPPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTL 181 Query: 317 PLPEAAGFGGVAG 279 L + GG AG Sbjct: 182 ELASRSPSGGAAG 194
>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor| Length = 1691 Score = 31.2 bits (69), Expect = 1.4 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 11/97 (11%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGH----------GSSNLP-FGQEPEGNGNTGVAQPTLPLPE 306 G PG PG++ + P G GSS + F P +G+ G+ + + LP Sbjct: 1002 GAPGLPGIIKGVSGKPGPPGFMGIRGLPGLKGSSGITGFPGMPGESGSQGI-RGSPGLPG 1060 Query: 305 AAGFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSG 195 A+G G+ G D GQT+ P P +SG Sbjct: 1061 ASGLPGLKG------DNGQTVEISGSPGPKGQPGESG 1091 Score = 30.0 bits (66), Expect = 3.2 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG-NGNTG-VAQPTLP-LPEAAGFGGVA 282 G+PG+PGLV P G + LP P+G G+ G V P +P LP +G G+ Sbjct: 867 GLPGNPGLVGLK---GSPGSPGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGISGTRGLK 923 Query: 281 G 279 G Sbjct: 924 G 924
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 31.2 bits (69), Expect = 1.4 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-EPEGNGNTGVAQPTLPL--PEAAGFGGVA 282 G G PGL+ + P E G LP Q P G+ G+ P P+ P G G A Sbjct: 1448 GEKGHPGLIGLIGPPGEQGEKGDRGLPGSQGSPGAKGDGGIPGPAGPIGPPGPPGLPGPA 1507 Query: 281 G 279 G Sbjct: 1508 G 1508
>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 31.2 bits (69), Expect = 1.4 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 5/64 (7%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-EPEGNGNTGV----AQPTLPLPEAAGFGG 288 G PG PG+V P E G P + EP G G+ P LP+P AG G Sbjct: 326 GPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGPKGFPGLPGQPGPPGLPVPGQAGAPG 385 Query: 287 VAGQ 276 G+ Sbjct: 386 FPGE 389
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 31.2 bits (69), Expect = 1.4 Identities = 31/95 (32%), Positives = 39/95 (41%), Gaps = 8/95 (8%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG----NGNTGVAQPTLPLPEAAGFGGV 285 G PG PG P G G++ P + P G NG+ G + P +P G G Sbjct: 848 GAPGPPGPQGVKGERGSPGGPGAAGFPGARGPPGPPGNNGDRGESGPP-GVPGPPGHPGP 906 Query: 284 AGQGHAVEDVGQTIGF----GSQPLVDNSPYDSGA 192 AG A G+ GF G Q + SP SGA Sbjct: 907 AGNNGAPGKAGER-GFQGPLGPQGAI-GSPGASGA 939 Score = 30.4 bits (67), Expect = 2.5 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 5/78 (6%) Frame = -3 Query: 458 HCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ----EPEGNGNTGVAQPTLPLPEAAGFG 291 H GMPG PG+ A + G S P + +P NG+ G P P E G Sbjct: 252 HPGMPGMPGMKGARGFDGKDGAKGDSGAPGPKGEAGQPGANGSPGQPGPGGPTGERGRPG 311 Query: 290 GVAGQG-HAVEDVGQTIG 240 G G H + T G Sbjct: 312 NPGGPGAHGKDGAPGTAG 329 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +1 Query: 349 LPSGSCPKGRLLLPCPTGSAKGGIAETRPGEPG 447 +P G P G LP P G++ A+ PGEPG Sbjct: 402 IPGGPGPPGGRGLPGPPGTSGNPGAKGTPGEPG 434
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 31.2 bits (69), Expect = 1.4 Identities = 29/92 (31%), Positives = 32/92 (34%), Gaps = 4/92 (4%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGN----GNTGVAQPTLPLPEAAGFGGV 285 G+PG G M P P G LP GN G+ G P P P AGF G Sbjct: 288 GLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGP-PGTAGFPGS 346 Query: 284 AGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 G V G SP +GAP Sbjct: 347 PGAKGEVGPAG-------------SPGSNGAP 365 Score = 30.8 bits (68), Expect = 1.9 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-EPEGNGNTGVAQPTLPLPEAAGFGGVAG 279 G+PG+PGL+ A P +G+ L G EP NG G P E AG GV G Sbjct: 402 GIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGE-AGIPGVPG 459
>CO8A1_MOUSE (Q00780) Collagen alpha-1(VIII) chain precursor| Length = 743 Score = 30.8 bits (68), Expect = 1.9 Identities = 32/106 (30%), Positives = 38/106 (35%), Gaps = 16/106 (15%) Frame = -3 Query: 458 HCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG-NGNTGVAQPTLP----------- 315 H G+PG PG+ + P EP G L Q P G G G + P P Sbjct: 466 HKGLPGLPGVPGLLGPKGEPGIPGDQGL---QGPPGIPGIVGPSGPIGPPGIPGPKGEPG 522 Query: 314 LPEAAGFGGVAGQG----HAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 LP GF GV G H +G QP + P G P Sbjct: 523 LPGPPGFPGVGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPP 568
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 30.8 bits (68), Expect = 1.9 Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 3/72 (4%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG-NGNTGVAQPTLPL--PEAAGFGGVA 282 G G PGL+ + P E G LP Q G G+ G+ P+ PL P G G Sbjct: 1480 GEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGDQGITGPSGPLGPPGPPGLPGPP 1539 Query: 281 GQGHAVEDVGQT 246 G A G T Sbjct: 1540 GPKGAKGSSGPT 1551
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 30.8 bits (68), Expect = 1.9 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -3 Query: 452 GMPGSPGLVSAM--PPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLP-LPEAAGFGGVA 282 G+PG PGL A P A P G G+ P G+ + + P LP LP G G+ Sbjct: 730 GLPGKPGLPGAKGEPAVAMPGGPGTPGFP-GERGNSGEHGEIGLPGLPGLPGTPGNEGLD 788 Query: 281 G 279 G Sbjct: 789 G 789 Score = 30.4 bits (67), Expect = 2.5 Identities = 35/115 (30%), Positives = 40/115 (34%), Gaps = 7/115 (6%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-------EPEGNGNTGVAQPTLPLPEAAGF 294 G+PG PGL HG +P Q P GNTG LP GF Sbjct: 487 GLPGLPGL------------HGVKGIPGRQGAAGLKGSPGSPGNTG-------LPGFPGF 527 Query: 293 GGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIG 129 G G + G+T+ Q V P G P L GI LGV G Sbjct: 528 PGAQGDPGLKGEKGETLQPEGQVGVPGDPGLRGQPGRK-GLDGIPGTLGVKGLPG 581
>ADA2B_RABIT (O77830) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)| (Alpha-2B adrenoreceptor) (Fragment) Length = 394 Score = 30.8 bits (68), Expect = 1.9 Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 14/110 (12%) Frame = -3 Query: 476 EPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSS----NLPFGQEPEGNGNTGVAQPTLP-- 315 E + Q C +PG P + +P A PV S + P G++ EG LP Sbjct: 202 EGESRQACPVPGGPSASAKLPTLATPVASASEANGPSKPAGEKEEGETPEDPGTQALPPG 261 Query: 314 ---LPEAA-----GFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 LP + G G + + A E+ + V SP G+P Sbjct: 262 WATLPNSGQGQKEGVSGASLEEEAEEEEEEEEEEDEPQAVPVSPASVGSP 311
>TGM1_MOUSE (Q9JLF6) Protein-glutamine gamma-glutamyltransferase K (EC| 2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K)) (Transglutaminase-1) (Epidermal TGase) Length = 815 Score = 30.4 bits (67), Expect = 2.5 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = -2 Query: 303 GRVRWCRWAGACS-GGRGADDWIWQPT 226 GR W R G CS G RG DDW +P+ Sbjct: 43 GRSFWARCCGCCSCGNRGDDDWGPEPS 69
>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (DNup214) Length = 1711 Score = 30.4 bits (67), Expect = 2.5 Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 14/102 (13%) Frame = -3 Query: 443 GSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQ--GH 270 G + P A P GS FG G+ + G T P GFGG GQ G Sbjct: 1541 GGGNSIFGSPATAPPASGGSI---FGG---GSSSGGFGSFTQTTPAQGGFGGGFGQGGGG 1594 Query: 269 AVEDVG---------QTI---GFGSQPLVDNSPYDSGAPKHG 180 +V G QT GFG++P+ SP +P G Sbjct: 1595 SVAQTGFGSPQAPQQQTTTPGGFGAKPVFGGSPAFGASPTFG 1636
>STML1_HUMAN (Q9UBI4) Stomatin-like protein 1 (SLP-1) (Stomatin-related protein)| (STORP) (EPB72-like 1) (UNC24 homolog) Length = 398 Score = 30.4 bits (67), Expect = 2.5 Identities = 15/58 (25%), Positives = 25/58 (43%) Frame = -1 Query: 325 PLCRCQKRQGSVVSLGRGMQWRTWGRRLDLXXXXXXXXXXXXAVRRSMDAACLASELR 152 P C+ + G+V+S+G +Q+R W L + + +M A L LR Sbjct: 127 PPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLR 184
>ITA2B_HUMAN (P08514) Integrin alpha-IIb precursor (Platelet membrane| glycoprotein IIb) (GPalpha IIb) (GPIIb) (CD41 antigen) [Contains: Integrin alpha-IIb heavy chain; Integrin alpha-IIb light chain] Length = 1039 Score = 30.4 bits (67), Expect = 2.5 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%) Frame = -3 Query: 389 GSSNLPFGQ-EPEGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVEDVGQTIGFGSQP-LVD 216 GS+ P G + +G + VA P +GG +G+G + +GQ+ G S+P V Sbjct: 388 GSAIAPLGDLDRDGYNDIAVAAP---------YGGPSGRGQVLVFLGQSEGLRSRPSQVL 438 Query: 215 NSPYDSGAPKHGCSLLG 165 +SP+ +G+ G SL G Sbjct: 439 DSPFPTGS-AFGFSLRG 454
>COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 482 Score = 30.4 bits (67), Expect = 2.5 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-EPEGNGNTGVAQPTLPL--PEAAGFGGVA 282 G G PGL+ + P E G LP Q P G+ G+ P P+ P G G A Sbjct: 126 GEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPIGPPGPPGLPGPA 185 Query: 281 G 279 G Sbjct: 186 G 186
>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 30.4 bits (67), Expect = 2.5 Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 3/72 (4%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG-NGNTGVAQPTLPL--PEAAGFGGVA 282 G G PGL+ + P E G LP Q G G G+ P+ PL P G G Sbjct: 1482 GEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPLGPPGPPGLPGPP 1541 Query: 281 GQGHAVEDVGQT 246 G A G T Sbjct: 1542 GPKGAKGSSGPT 1553
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 30.4 bits (67), Expect = 2.5 Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 3/72 (4%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG-NGNTGVAQPTLPL--PEAAGFGGVA 282 G G PGL+ + P E G LP Q G G G+ P+ PL P G G Sbjct: 1482 GEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPLGPPGPPGLPGPP 1541 Query: 281 GQGHAVEDVGQT 246 G A G T Sbjct: 1542 GPKGAKGSSGPT 1553
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 30.4 bits (67), Expect = 2.5 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = -3 Query: 470 RAAQHCGMPGSPGLVSAMPPFAEP-VGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAG 297 R A H +P PG + + PP A P + GS P G +G ++P P++ G Sbjct: 1824 RPALHLRIPPQPGALGSPPPAAAPTIFIGSPTTPAGLSTSADGFLKPPAGSVPGPDSPG 1882
>CO8A1_HUMAN (P27658) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 30.4 bits (67), Expect = 2.5 Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 13/101 (12%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNL--PFGQEPEGNGNTGVAQPTLP-------LPEAA 300 G+PG PG+ + P EP G L P G G + + P +P LP Sbjct: 468 GVPGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPP 527 Query: 299 GFGGVAGQG----HAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 GF G+ G H +G QP + P G P Sbjct: 528 GFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPPGPP 568
>YRF2_CAEEL (Q09578) Putative cuticle collagen K03H9.2| Length = 285 Score = 30.0 bits (66), Expect = 3.2 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 1/89 (1%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG-NGNTGVAQPTLPLPEAAGFGGVAGQ 276 GMPGSPG+ +P G P+G P+G +G G+ P +P G GV G Sbjct: 105 GMPGSPGIPGELPNILYQQVFGCRICPYG--PKGKSGYKGIDGPP-GIPGWPGEPGVRGM 161 Query: 275 GHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 G +D +P + G+P Sbjct: 162 NGERGSTG----------LDGAPGEPGSP 180
>PG46_MYCTU (P0A690) Hypothetical PE-PGRS family protein PE_PGRS46| Length = 778 Score = 30.0 bits (66), Expect = 3.2 Identities = 34/112 (30%), Positives = 46/112 (41%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQG 273 G+ G+ G+ +G+ N G + GNG G P + EA G GG G G Sbjct: 373 GLAGTNGVNPGSIANPNTGANGTDNSGNGNQTGGNGGPG---PAGGVGEAGGVGGQGGLG 429 Query: 272 HAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIGMALG 117 +++ T G G + D GA G GIG G SA G+A G Sbjct: 430 ESLDGNDGTGGKGGAG--GTAGTDGGAGGAG-GAGGIGETDG--SAGGVATG 476
>PG46_MYCBO (P0A691) Hypothetical PE-PGRS family protein PE_PGRS46| Length = 778 Score = 30.0 bits (66), Expect = 3.2 Identities = 34/112 (30%), Positives = 46/112 (41%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQG 273 G+ G+ G+ +G+ N G + GNG G P + EA G GG G G Sbjct: 373 GLAGTNGVNPGSIANPNTGANGTDNSGNGNQTGGNGGPG---PAGGVGEAGGVGGQGGLG 429 Query: 272 HAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIGMALG 117 +++ T G G + D GA G GIG G SA G+A G Sbjct: 430 ESLDGNDGTGGKGGAG--GTAGTDGGAGGAG-GAGGIGETDG--SAGGVATG 476
>SN1L1_HUMAN (P57059) Serine/threonine-protein kinase SNF1-like kinase 1 (EC| 2.7.11.1) (Serine/threonine-protein kinase SNF1LK) Length = 783 Score = 30.0 bits (66), Expect = 3.2 Identities = 32/123 (26%), Positives = 41/123 (33%), Gaps = 18/123 (14%) Frame = +1 Query: 91 QERTHTNQRPRAMPMAELTPSATPMPSKLHPCFG---APLSYGLLSTN-GWLPNPIVXXX 258 Q P A P P P P + PC G APL LL++ LP P++ Sbjct: 658 QRLLQLQHHPAAAPGCSQAPQPAPAPFVIAPCDGPGAAPLPSTLLTSGLPLLPPPLLQTG 717 Query: 259 XXXXXXXXXXXXXXXXXGSGRVGCATPVLPLP------SGSCPKGRL--------LLPCP 396 G+G A P +P P G P G L L+PC Sbjct: 718 ASPVASAAQLLDTHLHIGTGPT--ALPAVPPPRLARLAPGCEPLGLLQGDCEMEDLMPCS 775 Query: 397 TGS 405 G+ Sbjct: 776 LGT 778
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 30.0 bits (66), Expect = 3.2 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG-NGNTGVAQPTLPLPEAAGFGGVAGQ 276 G PG PG P P G +P + P G G GV P + LP AG GVAG+ Sbjct: 1030 GPPGRPG------PQGPPGAAGEKGVPGEKGPIGPTGRDGVQGP-VGLPGPAGPPGVAGE 1082 Query: 275 GHAVEDVG 252 +VG Sbjct: 1083 DGDKGEVG 1090
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 30.0 bits (66), Expect = 3.2 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG-NGNTGVAQPTLPLPEAAGFGGVAGQ 276 G PG PG P P G +P + P G G GV P + LP AG GVAG+ Sbjct: 1030 GPPGRPG------PQGPPGAAGEKGVPGEKGPIGPTGRDGVQGP-VGLPGPAGPPGVAGE 1082 Query: 275 GHAVEDVG 252 +VG Sbjct: 1083 DGDKGEVG 1090
>FOXJ2_HUMAN (Q9P0K8) Forkhead box protein J2 (Fork head homologous X)| Length = 574 Score = 30.0 bits (66), Expect = 3.2 Identities = 22/77 (28%), Positives = 31/77 (40%) Frame = -3 Query: 440 SPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVE 261 SP ++ P G G ++LP PEGN + PT + G G V G A Sbjct: 164 SPEQEASKSPRGGVAGSGEASLP----PEGNPQMSLQSPTSIASYSQGTGSVDGGAVAAG 219 Query: 260 DVGQTIGFGSQPLVDNS 210 G+ G PL + + Sbjct: 220 ASGRESAEGPPPLYNTN 236
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 30.0 bits (66), Expect = 3.2 Identities = 25/75 (33%), Positives = 29/75 (38%) Frame = -3 Query: 413 PFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVEDVGQTIGFG 234 P A P G N PF G+TG+A+P P P A G AG G G Sbjct: 205 PGARPAGPRPGNNPF----TSGGSTGMARPQAPRPGGAPRPGGAGAPGGPRPQGA----G 256 Query: 233 SQPLVDNSPYDSGAP 189 Q D +P G P Sbjct: 257 GQ---DRAPRPQGGP 268
>K2C6E_HUMAN (P48668) Keratin, type II cytoskeletal 6E (Cytokeratin-6E) (CK 6E)| (K6e keratin) (Keratin K6h) Length = 563 Score = 30.0 bits (66), Expect = 3.2 Identities = 25/82 (30%), Positives = 36/82 (43%) Frame = -3 Query: 362 EPEGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKH 183 E G N V Q T+ ++G+GG +G VG +G G S Y G+ Sbjct: 478 EGVGQVNVSVVQSTI----SSGYGGASG-------VGSGLGLGG-----GSSYSYGS--- 518 Query: 182 GCSLLGIGVALGVSSAIGMALG 117 G+G+ G SS+ G A+G Sbjct: 519 -----GLGIGGGFSSSSGRAIG 535
>K2C6D_HUMAN (P48667) Keratin, type II cytoskeletal 6D (Cytokeratin-6D) (CK 6D)| (K6d keratin) (Fragment) Length = 384 Score = 30.0 bits (66), Expect = 3.2 Identities = 26/82 (31%), Positives = 36/82 (43%) Frame = -3 Query: 362 EPEGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKH 183 E G N V Q T+ ++G+GG +G VG +G G S Y G+ Sbjct: 299 EGVGQVNVSVVQSTV----SSGYGGASG-------VGSGLGLGG-----GSSYSYGS--- 339 Query: 182 GCSLLGIGVALGVSSAIGMALG 117 G+GV G SS+ G A+G Sbjct: 340 -----GLGVGGGFSSSSGRAIG 356
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 29.6 bits (65), Expect = 4.2 Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 9/75 (12%) Frame = -3 Query: 473 PRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG----NGNTGVAQP-----T 321 P A G PG+ G A E G + P Q P G G TGV P Sbjct: 802 PGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGA 861 Query: 320 LPLPEAAGFGGVAGQ 276 P A GF G AG+ Sbjct: 862 QGPPGATGFPGAAGR 876
>CINA_ANASP (Q8YMW6) CinA-like protein| Length = 424 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 5/34 (14%) Frame = +1 Query: 367 PKGRLLLPCPTGSAKGGIAETRPGE-----PGIP 453 P+G +LP PTG+A G I E RP PG+P Sbjct: 121 PQGADILPNPTGTAPGIIWEPRPNMTIFTFPGVP 154
>KELC_ANOST (Q70JS2) Ring canal kelch homolog (Kelch-like protein 1) [Contains:| Kelch short protein] Length = 1499 Score = 29.6 bits (65), Expect = 4.2 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Frame = -3 Query: 473 PRAAQHCGMPGS-PGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQP 324 P A ++ M GS P ++ P A H N+P P G G G+A P Sbjct: 1249 PPAREYPTMTGSYPRVLRNTPQLARLREHEYENVPLNDPPPGRGLRGIASP 1299
>PG33_MYCTU (Q50615) Hypothetical PE-PGRS family protein PE_PGRS33| Length = 498 Score = 29.6 bits (65), Expect = 4.2 Identities = 29/88 (32%), Positives = 34/88 (38%), Gaps = 2/88 (2%) Frame = -3 Query: 401 PVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVEDVGQTIGFGSQP- 225 P G+G + FG G VA T AGFGG G G + G G G + Sbjct: 153 PGGNGGAAGLFGNGGAGGAGGNVASGT------AGFGGAGGAGGLLYGAGGAGGAGGRAG 206 Query: 224 -LVDNSPYDSGAPKHGCSLLGIGVALGV 144 V GA +G L G G A GV Sbjct: 207 GGVGGIGGAGGAGGNGGLLFGAGGAGGV 234
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 29.6 bits (65), Expect = 4.2 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 3/72 (4%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG-NGNTGVAQPTLPL--PEAAGFGGVA 282 G G PGL+ + P E G LP Q G G G+ P+ P+ P G G Sbjct: 1480 GEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPP 1539 Query: 281 GQGHAVEDVGQT 246 G A G T Sbjct: 1540 GPKGAKGSSGPT 1551
>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor| Length = 1707 Score = 29.6 bits (65), Expect = 4.2 Identities = 29/103 (28%), Positives = 36/103 (34%), Gaps = 7/103 (6%) Frame = -3 Query: 476 EPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLP-----FGQE--PEGNGNTGVAQPTL 318 +P G+PG PGL P GS +P GQ P +G G + P Sbjct: 775 QPGTRGDAGLPGQPGLKGLPGETGAPGFRGSQGMPGMPGLKGQPGFPGPSGQPGQSGP-- 832 Query: 317 PLPEAAGFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 P F G G+ + G G G P P D G P Sbjct: 833 --PGQHAFPGTPGREGPLGQPGSP-GLGGLPGDRGEPGDPGVP 872
>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 29.6 bits (65), Expect = 4.2 Identities = 23/72 (31%), Positives = 25/72 (34%), Gaps = 5/72 (6%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLP-FGQEPEGNGNTGV----AQPTLPLPEAAGFGG 288 G+PG PG V P E G P EP G G P P P AG G Sbjct: 326 GLPGPPGTVIGTMPLGEKGDRGYPGAPGLRGEPGPKGFPGTPGQPGPPGFPTPGQAGAPG 385 Query: 287 VAGQGHAVEDVG 252 G+ D G Sbjct: 386 FPGERGEKGDQG 397
>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated| protein 10.8) (High sulfur keratin-associated protein 10.8) (Keratin-associated protein 18-8) (Keratin-associated protein 18.8) Length = 259 Score = 29.6 bits (65), Expect = 4.2 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 7/58 (12%) Frame = +2 Query: 128 CQWQS*HPAQLRCQASCIHASAHR-------CRMGCCPPMVGCQIQSSAPRPPLHAPA 280 CQ S PA C SC S+ CR CC P+ C + +S+ +P PA Sbjct: 188 CQKSSCQPAC--CTTSCCRPSSSVSLLCRPVCRPACCVPVPSCCVPASSCQPSCCHPA 243
>K2C6C_HUMAN (P48666) Keratin, type II cytoskeletal 6C (Cytokeratin-6C) (CK 6C)| (K6c keratin) Length = 563 Score = 29.6 bits (65), Expect = 4.2 Identities = 26/82 (31%), Positives = 36/82 (43%) Frame = -3 Query: 362 EPEGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKH 183 E G N V Q T+ ++G+GG +G VG +G G S Y G+ Sbjct: 478 EGVGQVNISVVQSTV----SSGYGGASG-------VGSGLGLGG-----GSSYSYGS--- 518 Query: 182 GCSLLGIGVALGVSSAIGMALG 117 G+GV G SS+ G A+G Sbjct: 519 -----GLGVGGGFSSSSGRAIG 535
>K2C6A_HUMAN (P02538) Keratin, type II cytoskeletal 6A (Cytokeratin-6A) (CK 6A)| (K6a keratin) Length = 563 Score = 29.6 bits (65), Expect = 4.2 Identities = 26/82 (31%), Positives = 36/82 (43%) Frame = -3 Query: 362 EPEGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKH 183 E G N V Q T+ ++G+GG +G VG +G G S Y G+ Sbjct: 478 EGVGQVNISVVQSTV----SSGYGGASG-------VGSGLGLGG-----GSSYSYGS--- 518 Query: 182 GCSLLGIGVALGVSSAIGMALG 117 G+GV G SS+ G A+G Sbjct: 519 -----GLGVGGGFSSSSGRAIG 535
>COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor| Length = 680 Score = 29.6 bits (65), Expect = 4.2 Identities = 30/108 (27%), Positives = 42/108 (38%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQG 273 G+PGSPG + P P HG P G G+ P P P A G G G Sbjct: 335 GLPGSPGNMGPQGPKGIPGNHGI--------PGAKGEIGLVGPAGP-PGARGARGPPGLD 385 Query: 272 HAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIG 129 G+T G+ +P ++ + G P G+G G+ +G Sbjct: 386 ------GKT-GYPGEPGLNGPKGNPGLPGQKGD-PGVGGTPGLRGPVG 425
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 29.6 bits (65), Expect = 4.2 Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 9/75 (12%) Frame = -3 Query: 473 PRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG----NGNTGVAQP-----T 321 P A G PG+ G A E G + P Q P G G TGV P Sbjct: 762 PGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGA 821 Query: 320 LPLPEAAGFGGVAGQ 276 P A GF G AG+ Sbjct: 822 QGPPGATGFPGAAGR 836
>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor| Length = 674 Score = 29.6 bits (65), Expect = 4.2 Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 6/115 (5%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGN----GNTGV-AQPTLPLPEA-AGFG 291 G+PGSPG P P G + LP P GN G G+ P LP P+ G Sbjct: 314 GLPGSPGAKGEQGPAGHP---GEAGLP---GPSGNMGPQGPKGIPGNPGLPGPKGEMGPV 367 Query: 290 GVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIGM 126 G AG A + G + G +P P +G PK L G G++ + G+ Sbjct: 368 GPAGNPGAKGERGSS-GLDGKPGYPGEPGLNG-PKGNPGLPGPKGDPGIAGSPGL 420
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 29.6 bits (65), Expect = 4.2 Identities = 31/152 (20%), Positives = 48/152 (31%), Gaps = 26/152 (17%) Frame = +1 Query: 79 ATTPQERTHTNQRPRAMPMAELTPSATPMPSKLHPCFGAPLSY---------------GL 213 A + RT ++PRA + S +P PS P PLS+ GL Sbjct: 342 AAAAEGRTPPARQPRAAQEPPIVISDSPPPSPRRPAGPGPLSFVSSSSAQVSSGPGGGGL 401 Query: 214 LSTNGWLPNPIVXXXXXXXXXXXXXXXXXXXXGSGRVGCATPVLPLPSGSCPKGRL---- 381 ++G P + G A P +P+ + P+ R+ Sbjct: 402 PQSSGRAARPRAAVAPRVRSPPRAAAAPVVSASADAAGPAPPAVPVDAHRAPRSRMTQAQ 461 Query: 382 -------LLPCPTGSAKGGIAETRPGEPGIPQ 456 L A+G G PG+P+ Sbjct: 462 TDTQAQSLGRAGATDARGSGGPGAEGGPGVPR 493
>HMCT_BOMMO (P98092) Hemocytin precursor (Humoral lectin)| Length = 3133 Score = 29.3 bits (64), Expect = 5.5 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = -2 Query: 258 RGADDWIWQPTIGGQQPIRQRCAEAWMQLAWHRSCAGCQLCHWHGPRSLICVRALLRRC 82 RG D + P +G + CA+ + L W + C+L G + +C + LR+C Sbjct: 2 RGGRDPVPVPVLGDYAMV---CAKNGIILQWRYNVKECELSCTGGQQYTVCADSCLRKC 57
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 29.3 bits (64), Expect = 5.5 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGN-GNTGVAQPTLPLPEAAGFGGVAGQ 276 G PG PG V P G G +P G P+G+ G TG ++ LP G G G Sbjct: 1887 GPPGLPGPVG-------PPGQGFPGVPGGTGPKGDRGETG-SKGEQGLPGERGLRGEPGS 1938 Query: 275 GHAVEDVGQTIGFGSQPL 222 V+ + +T G + L Sbjct: 1939 VPNVDRLLETAGIKASAL 1956 Score = 28.9 bits (63), Expect = 7.2 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEP-----VGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGG 288 G+PGSPGL + P EP G LP G + E G+A + P A G G Sbjct: 2275 GVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLP-GAKGEKGAPGGLAGDLVGEPGAKGDRG 2333 Query: 287 VAG 279 + G Sbjct: 2334 LPG 2336
>COL14_CAEEL (P18834) Cuticle collagen 14| Length = 345 Score = 29.3 bits (64), Expect = 5.5 Identities = 29/90 (32%), Positives = 35/90 (38%), Gaps = 2/90 (2%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ--EPEGNGNTGVAQPTLPLPEAAGFGGVAG 279 G+PG+PG P EP + + P G+ P G G P P P G GG G Sbjct: 243 GIPGAPGQPGRPGPPGEPGTYKTEVGPAGRAGAPGRPGPPGQPGPAGP-PGENGKGGGQG 301 Query: 278 QGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 GQ G P P D+GAP Sbjct: 302 PSGLPGPPGQP-GQNGAPGEVGQPGDNGAP 330
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 29.3 bits (64), Expect = 5.5 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQ-EPEGNGNTGVAQPTLPL--PEAAGFGGVA 282 G G PGL+ + P E G LP Q P G+ G+ P PL P G G Sbjct: 1450 GEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQ 1509 Query: 281 G 279 G Sbjct: 1510 G 1510
>PG44_MYCTU (Q50630) Hypothetical PE-PGRS family protein PE_PGRS44| Length = 543 Score = 29.3 bits (64), Expect = 5.5 Identities = 22/76 (28%), Positives = 32/76 (42%) Frame = -3 Query: 458 HCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAG 279 + G G+ G SA+ +A+ G FG+ G+G G A L GFGG+ G Sbjct: 330 NAGDGGAGGDSSALIGYAQGGSGGLGG--FGESTGGDGGLGGAGAVLIGTGVGGFGGLGG 387 Query: 278 QGHAVEDVGQTIGFGS 231 + G G G+ Sbjct: 388 GSNGTGGAGGAGGTGA 403 Score = 28.9 bits (63), Expect = 7.2 Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 3/75 (4%) Frame = -3 Query: 449 MPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGV---AQPTLPLPEAAGFGGVAG 279 +P G A +G G + P G GNG G A +L G GG G Sbjct: 205 VPAGTGGAGGAGGDAPLIGWGGNGGPGGFAAFGNGGAGGNGGASGSL-----FGVGGAGG 259 Query: 278 QGHAVEDVGQTIGFG 234 G + EDVG T G G Sbjct: 260 VGGSSEDVGGTGGAG 274
>KAPR_MAGGR (O14448) cAMP-dependent protein kinase regulatory subunit (PKA| regulatory subunit) Length = 390 Score = 29.3 bits (64), Expect = 5.5 Identities = 17/40 (42%), Positives = 18/40 (45%) Frame = -3 Query: 410 FAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFG 291 F P G S+ PFG E G G QP L EA G G Sbjct: 6 FTSPFGANSN--PFGSPEERRGVAGSIQPVLEEEEADGIG 43
>FLCN_XENTR (Q5M7Q1) Folliculin| Length = 579 Score = 29.3 bits (64), Expect = 5.5 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -2 Query: 147 CQLCHWHGPRSLICVRAL 94 C C HGPR+L C AL Sbjct: 8 CHFCELHGPRTLFCTEAL 25
>COAA1_HUMAN (Q03692) Collagen alpha-1(X) chain precursor| Length = 680 Score = 29.3 bits (64), Expect = 5.5 Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 13/101 (12%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG-------------NGNTGVAQPTLPL 312 G+PG PG P P G + P P+G G TG A P Sbjct: 314 GLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGP---- 369 Query: 311 PEAAGFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAP 189 AG+ G G+ + G+ G+ +P +D + G P Sbjct: 370 ---AGYPGAKGERGSPGSDGKP-GYPGKPGLDGPKGNPGLP 406
>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Plakophilin-related armadillo repeat protein-interacting PDZ protein) Length = 2766 Score = 29.3 bits (64), Expect = 5.5 Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 13/81 (16%) Frame = -3 Query: 395 GHGSSNLPFGQEP-EGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVE------------DV 255 G+ F QEP NG + TLPL AG G A VE D Sbjct: 2635 GNDQPGPSFKQEPPSANGKGPFPRRTLPLEPGAGRNGAAHDALCVEVLKTSAGLGLSLDG 2694 Query: 254 GQTIGFGSQPLVDNSPYDSGA 192 G++ G PLV Y GA Sbjct: 2695 GKSSVSGEGPLVIKRVYKGGA 2715
>ITA2B_MOUSE (Q9QUM0) Integrin alpha-IIb precursor (Platelet membrane| glycoprotein IIb) (GPalpha IIb) (GPIIb) (CD41 antigen) [Contains: Integrin alpha-IIb heavy chain; Integrin alpha-IIb light chain] Length = 1033 Score = 29.3 bits (64), Expect = 5.5 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = -3 Query: 305 AAGFGGVAGQGHAVEDVGQTIGFGSQP-LVDNSPYDSGAPKHGCSLLG 165 AA +GG +GQG + +GQ+ G +P V +SP+ +G+ G SL G Sbjct: 407 AAPYGGPSGQGQVLIFLGQSEGLSPRPSQVLDSPFPTGS-GFGFSLRG 453
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 29.3 bits (64), Expect = 5.5 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Frame = -3 Query: 467 AAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLP--LPEAAGF 294 A+++ PGSPG PP P L +G E E G+ P P L +A Sbjct: 2 ASENKQRPGSPGPTDGPPPTPSPDRDERGALGWGAETEEGGDDPDHDPDHPHDLDDARRD 61 Query: 293 GGVAGQG-HAVEDVGQTI 243 G G A ED G + Sbjct: 62 GRAPAAGTDAGEDAGDAV 79
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 28.9 bits (63), Expect = 7.2 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 7/60 (11%) Frame = +1 Query: 85 TPQERTHTNQRPRAMPMAELTPS-------ATPMPSKLHPCFGAPLSYGLLSTNGWLPNP 243 TP E T+T+ +++ PS ++ +PS P G+P S+G +T+ P P Sbjct: 243 TPSEGTNTSGASECESVSDKAPSPATLPATSSSLPSPATPSHGSPSSHGPPATHPTSPTP 302
>PI3R5_PIG (O02696) Phosphoinositide 3-kinase regulatory subunit 5 (PI3-kinase| regulatory subunit 5) (PI3-kinase p101 subunit) (PtdIns-3-kinase p101) (p101-PI3K) (Phosphatidylinositol-4,5-bisphosphate 3-kinase regulatory subunit) (PtdIns-3-kinase regulato Length = 877 Score = 28.9 bits (63), Expect = 7.2 Identities = 21/50 (42%), Positives = 25/50 (50%) Frame = +2 Query: 218 PPMVGCQIQSSAPRPPLHAPAQRHHRTLPLLAAAEWAVLHRYCRCLLVPV 367 PP V CQ + PRP +PAQ LP+LA +L YCR PV Sbjct: 627 PPEVLCQSLKAEPRPLEGSPAQ-----LPILA----DMLLYYCRFAARPV 667
>BIND_ARBPU (P24608) Bindin precursor| Length = 480 Score = 28.9 bits (63), Expect = 7.2 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 2/95 (2%) Frame = -3 Query: 473 PRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGF 294 P AA G G+P PP +P+G + F EP G + A+ + + E Sbjct: 288 PAAAGPAGGFGAP---QGQPPVGQPIGEAAGGGEFLGEPGVGGESEFAEYSSSIGE---- 340 Query: 293 GGVAGQGHAVEDVGQTIGFG--SQPLVDNSPYDSG 195 G +E + +G P+ N PYD G Sbjct: 341 -GETINAEVMEKIKAVLGATKIDLPVDINDPYDLG 374
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 28.9 bits (63), Expect = 7.2 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 7/60 (11%) Frame = +1 Query: 85 TPQERTHTNQRPRAMPMAELTPS-------ATPMPSKLHPCFGAPLSYGLLSTNGWLPNP 243 TP E T+T+ +++ PS ++ +PS P G+P S+G +T+ P P Sbjct: 243 TPSEGTNTSGASECESVSDKAPSPATLPATSSSLPSPATPSHGSPSSHGPPATHPTSPTP 302
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 28.9 bits (63), Expect = 7.2 Identities = 19/46 (41%), Positives = 22/46 (47%) Frame = +1 Query: 337 PVLPLPSGSCPKGRLLLPCPTGSAKGGIAETRPGEPGIPQCCAARG 474 P+ P P CP+G P P G G E PG PG+P AA G Sbjct: 139 PITPPPCKPCPQGPPGPPGPPG-PPGDSGE--PGSPGLPGQDAAPG 181
>GLH4_CAEEL (O76743) ATP-dependent RNA helicase glh-4 (EC 3.6.1.-) (Germline| helicase 4) Length = 1156 Score = 28.9 bits (63), Expect = 7.2 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Frame = -3 Query: 467 AAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG------NGNTGVAQPTLPLPE 306 AA++ G+P P A S+ FGQ+ +G NG G + + Sbjct: 283 AAENSGLPTETTGFGGKLPSAGFGASSSNESAFGQQSKGFGGATKNGFGGDSSSSFGSGS 342 Query: 305 AAGFGGVAGQGHAVEDVGQTIGFG 234 AGFGG + G + G T G Sbjct: 343 KAGFGGTSSSGIGGQKPGATESSG 366
>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated| protein 10.4) (High sulfur keratin-associated protein 10.4) (Keratin-associated protein 18-4) (Keratin-associated protein 18.4) Length = 401 Score = 28.9 bits (63), Expect = 7.2 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 7/58 (12%) Frame = +2 Query: 128 CQWQS*HPAQLRCQASCIHASAHR-------CRMGCCPPMVGCQIQSSAPRPPLHAPA 280 CQ S PA C SC S+ CR CC P+ C +S+ +P PA Sbjct: 340 CQQSSCQPAC--CTTSCCRPSSSVSLLCRPVCRPACCVPVPSCCAPTSSCQPSCCRPA 395
>CLCE_ARATH (Q8GX93) Chloride channel protein CLC-e (AtCLC-e)| Length = 710 Score = 28.9 bits (63), Expect = 7.2 Identities = 18/63 (28%), Positives = 30/63 (47%) Frame = -3 Query: 281 GQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIGMALGL*FVC 102 G G+++ G ++ G+ + + +P+ G SLL G A G+SS A+ F Sbjct: 182 GTGNSLGPEGPSVEIGASIAKGVNSLFNKSPQTGFSLLAAGSAAGISSGFNAAVAGCFFA 241 Query: 101 VRS 93 V S Sbjct: 242 VES 244
>PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2333 Score = 28.9 bits (63), Expect = 7.2 Identities = 35/126 (27%), Positives = 48/126 (38%), Gaps = 13/126 (10%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQG 273 G+ G+ G S +P + S LP G E G + P + E +GF GV+GQ Sbjct: 1467 GISGA-GETSGLPVSELDISGAVSGLPSGAELSGQAS---GSPDMS-GETSGFFGVSGQP 1521 Query: 272 HAVEDV-----------GQTIGFGSQP--LVDNSPYDSGAPKHGCSLLGIGVALGVSSAI 132 D+ GQ GF + + + S SG P G A GV S Sbjct: 1522 SGFPDISGGTSGLFEVSGQPSGFSGETSGVTELSGLYSGQPDVS------GEASGVPSGS 1575 Query: 131 GMALGL 114 G G+ Sbjct: 1576 GQPFGM 1581
>COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1774 Score = 28.9 bits (63), Expect = 7.2 Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGN-GNTGVAQPTLPLPEAAGFGGVAGQ 276 G+PG PG +A G + LP EG G G P P P G GVAGQ Sbjct: 936 GLPGEPGRFGINGSYAP----GPAGLPGVPGKEGPPGFPGPPGPPGP-PGKEGPPGVAGQ 990 Query: 275 GHAVEDVG 252 +V DVG Sbjct: 991 KGSVGDVG 998
>CPSF7_MOUSE (Q8BTV2) Cleavage and polyadenylation specificity factor 7| Length = 471 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +1 Query: 88 PQERTHTNQRPRAMPMAELTPSATPMPSKLHPCFGAP 198 P + N+ P A+P+ L P P P L FG P Sbjct: 219 PSVLPYFNRPPSALPLMGLPPPPIPPPPPLSSSFGVP 255
>CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity factor 7| (Cleavage and polyadenylation specificity factor 59 kDa subunit) (CPSF 59 kDa subunit) (Pre-mRNA cleavage factor Im 59-kDa subunit) Length = 471 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +1 Query: 88 PQERTHTNQRPRAMPMAELTPSATPMPSKLHPCFGAP 198 P + N+ P A+P+ L P P P L FG P Sbjct: 219 PSVLPYFNRPPSALPLMGLPPPPIPPPPPLSSSFGVP 255
>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor| Length = 1775 Score = 28.5 bits (62), Expect = 9.4 Identities = 32/109 (29%), Positives = 40/109 (36%), Gaps = 1/109 (0%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEG-NGNTGVAQPTLPLPEAAGFGGVAGQ 276 G PGSPGLV P G P P+G G TG P G G+ G Sbjct: 941 GEPGSPGLVGM------PGNKGDRGAPGNDGPKGFAGVTGA-------PGKRGPAGIPGV 987 Query: 275 GHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIG 129 A D G + G ++ P P L+GI G++ A G Sbjct: 988 SGAKGDKGASGLTG-----NDGPVGGRGPPGAPGLMGIKGDQGLAGAPG 1031
>SM50_STRPU (P11994) 50 kDa spicule matrix protein precursor| Length = 445 Score = 28.5 bits (62), Expect = 9.4 Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 2/95 (2%) Frame = -3 Query: 437 PGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQGHAVED 258 PG+ P F G G FG +P G QP G+G G G Sbjct: 220 PGMGGRQPGFGNQPGMGGRQPGFGNQP----GMGGRQP--------GWGNQPGVGGRQPG 267 Query: 257 V-GQTIGFGSQPLV-DNSPYDSGAPKHGCSLLGIG 159 + GQ G+G+QP V P G P G G G Sbjct: 268 MGGQQPGWGNQPGVGGRQPGMGGQPGVGGRQPGFG 302
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 28.5 bits (62), Expect = 9.4 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 17/76 (22%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGN---------GNTG----VAQPTLPL 312 G+PG PG P EP HG + P G+ GN G +P LP Sbjct: 1208 GLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPG 1267 Query: 311 PEA----AGFGGVAGQ 276 PE G GG+ G+ Sbjct: 1268 PEGPPGLPGNGGIKGE 1283
>CPSF7_RAT (Q5XI29) Cleavage and polyadenylation specificity factor 7| Length = 462 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = +1 Query: 88 PQERTHTNQRPRAMPMAELTPSATPMPSKLHPCFGAP 198 P + N+ P A+P+ L P P P L FG P Sbjct: 210 PSVLPYFNRPPSALPLMGLPPPPIPPPPPLSSSFGVP 246
>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3| Length = 266 Score = 28.5 bits (62), Expect = 9.4 Identities = 33/105 (31%), Positives = 39/105 (37%), Gaps = 7/105 (6%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQE-------PEGNGNTGVAQPTLPLPEAAGF 294 G PG+PG P P G+ P GQ+ P G G P P P G Sbjct: 145 GQPGAPGNKGPSGPNGNPGAPGAPGQP-GQDAPSEPITPGAPGPQGTPGPQGP-PGQPGQ 202 Query: 293 GGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIG 159 G GQ A G G QP D +P GAP + G+G Sbjct: 203 PGHDGQPGAPGPKGPN-GNPGQPGADGNP---GAPGQSGTPGGVG 243
>GALT9_MACFA (Q9GM01) Polypeptide N-acetylgalactosaminyltransferase 9 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 9) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 9) (Polypeptide GalNAc transferase 9) (GalNAc-T9) (pp-GaNTase 9) Length = 606 Score = 28.5 bits (62), Expect = 9.4 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 Query: 349 LPSGSCPKGRLLLPCPTGSAKGGIAET 429 LP+ C GRL++P A+GG+A T Sbjct: 79 LPAEPCSPGRLMVPEAEAEAQGGLAAT 105
>OTP_PARLI (O76971) Homeobox protein orthopedia-related (PLOTP)| Length = 364 Score = 28.5 bits (62), Expect = 9.4 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 3/108 (2%) Frame = -3 Query: 452 GMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTGVAQPTLPLPEAAGFGGVAGQG 273 G P G+ + M P H ++++P Q P G G A P G G Q Sbjct: 214 GWPAMSGMTTHMAP------HMTTHMPSHQMPLMGGGPGSALALPPSLPRQGLGQSMQQQ 267 Query: 272 HAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGI---GVALGVSS 138 +GQT G + + N S + SL G+ ++ G+SS Sbjct: 268 SVNCSMGQTTGLNTLSMGTNGSMGSMTSMYQPSLGGMTTGSMSSGLSS 315
>UBQL3_HUMAN (Q9H347) Ubiquilin-3| Length = 655 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +1 Query: 91 QERTHTNQRPRA-MPMAELTPSATPMPSKLHPCFGAP-LSYGLLS 219 Q R N+ P A +P +P + P PS ++P G P S GLL+ Sbjct: 94 QHRAMGNECPAASVPTQGPSPGSLPQPSSIYPADGPPAFSLGLLT 138
>STML1_MOUSE (Q8CI66) Stomatin-like protein 1 (SLP-1)| Length = 399 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/58 (24%), Positives = 24/58 (41%) Frame = -1 Query: 325 PLCRCQKRQGSVVSLGRGMQWRTWGRRLDLXXXXXXXXXXXXAVRRSMDAACLASELR 152 P C+ + G+V+S+G +Q+R W L + +M A L L+ Sbjct: 127 PPCKLASKDGAVLSVGADVQFRIWDPVLSVMAVKDLNTATRMTAHNAMTKALLRRPLQ 184
>NPY5R_MOUSE (O70342) Neuropeptide Y receptor type 5 (NPY5-R) (NPY-Y5 receptor)| (Y5 receptor) Length = 466 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +1 Query: 340 VLPLPSGSCPKGRLLLPCPTGSAKGGIAETRPGEPGIPQC 459 VLP P+G + L +P GS + ++ + PG+P C Sbjct: 317 VLPAPAGPSQEKHLTVPENPGSVRSQLSPSSKVIPGVPIC 356
>IF2P_YEAST (P39730) Eukaryotic translation initiation factor 5B (eIF-5B)| (Translation initiation factor IF-2) Length = 1002 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 91 QERTHTNQRPRAMPMAELTPSATPMPSKLHP 183 +ER H ++ ++ P A TP+ATP PS P Sbjct: 370 EERAHVHEVAKSTPAA--TPAATPTPSSASP 398
>COCA1_BOVIN (P25508) Collagen alpha-1(XII) chain (Fragments)| Length = 86 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/47 (31%), Positives = 18/47 (38%) Frame = -3 Query: 476 EPRAAQHCGMPGSPGLVSAMPPFAEPVGHGSSNLPFGQEPEGNGNTG 336 EP G PG+PG+ P G LP P+G TG Sbjct: 17 EPGPGGRPGFPGTPGMQGPQGERGLPGEXGERGLPGPPGPQGESRTG 63 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,400,370 Number of Sequences: 219361 Number of extensions: 1988488 Number of successful extensions: 8714 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 7516 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8662 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
