>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                         
Query: 421     gccgagaccagaccgggtgagccgggcatcccgcagtgttgcgcggcgcgcggctcgt 478
               |||||| | |||||||| ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 7651751 gccgaggcgagaccgggggagcctggcatcccgcagtgctgcgcggcgcgcggctcgt 7651808



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 196     ccgctgtcgtatgggctgttgtccacca 223
               ||||||||||| ||||||||||||||||
Sbjct: 7651466 ccgctgtcgtacgggctgttgtccacca 7651493

>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                       
Query: 421   gccgagaccagaccgggtgagccgggcatcccgcagtgttgcgcggcgcgcggctcgt 478
             |||||| | |||||||| ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 63539 gccgaggcgagaccgggggagcctggcatcccgcagtgctgcgcggcgcgcggctcgt 63482



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 196   ccgctgtcgtatgggctgttgtccacca 223
             ||||||||||| ||||||||||||||||
Sbjct: 63824 ccgctgtcgtacgggctgttgtccacca 63797

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                         
Query: 421     gccgagaccagaccgggtgagccgggcatcccgcagtgttgcgcggcgcgcggctcgt 478
               |||||| | |||||||| ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 7649586 gccgaggcgagaccgggggagcctggcatcccgcagtgctgcgcggcgcgcggctcgt 7649643



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 196     ccgctgtcgtatgggctgttgtccacca 223
               ||||||||||| ||||||||||||||||
Sbjct: 7649301 ccgctgtcgtacgggctgttgtccacca 7649328

>dbj|AK064707.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A07, full
           insert sequence
          Length = 1269

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 421 gccgagaccagaccgggtgagccgggcatcccgcagtgttgcgcggcgcgcggctcgt 478
           |||||| | |||||||| ||||| |||||||||||||| |||||||||||||||||||
Sbjct: 685 gccgaggcgagaccgggggagcctggcatcccgcagtgctgcgcggcgcgcggctcgt 628



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 196 ccgctgtcgtatgggctgttgtccacca 223
           ||||||||||| ||||||||||||||||
Sbjct: 970 ccgctgtcgtacgggctgttgtccacca 943

>ref|NM_194925.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNAa0034B05.10), mRNA
          Length = 1125

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 196  ccgctgtcgtatgggctgttgtccacca 223
            ||||||||||| ||||||||||||||||
Sbjct: 1055 ccgctgtcgtacgggctgttgtccacca 1028

>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0004E08, complete sequence
          Length = 158294

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 196   ccgctgtcgtatgggctgttgtccacca 223
             ||||||||||| ||||||||||||||||
Sbjct: 34094 ccgctgtcgtacgggctgttgtccacca 34067

>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0034B05, complete sequence
          Length = 125655

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 196   ccgctgtcgtatgggctgttgtccacca 223
             ||||||||||| ||||||||||||||||
Sbjct: 99749 ccgctgtcgtacgggctgttgtccacca 99722

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 196     ccgctgtcgtatgggctgttgtccacca 223
               ||||||||||| ||||||||||||||||
Sbjct: 3442965 ccgctgtcgtacgggctgttgtccacca 3442938

>dbj|AK108770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-H05, full
            insert sequence
          Length = 1436

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 196  ccgctgtcgtatgggctgttgtccacca 223
            ||||||||||| ||||||||||||||||
Sbjct: 1129 ccgctgtcgtacgggctgttgtccacca 1102

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 196     ccgctgtcgtatgggctgttgtccacca 223
               ||||||||||| ||||||||||||||||
Sbjct: 3442886 ccgctgtcgtacgggctgttgtccacca 3442859

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 397     accggctccgcgaagggcggca 418
               ||||||||||||||||||||||
Sbjct: 4131745 accggctccgcgaagggcggca 4131724

>gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, complete sequence
          Length = 185146

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     agaaataataagaagaaattc 64
              |||||||||||||||||||||
Sbjct: 140089 agaaataataagaagaaattc 140109

>gb|DP000032.1| Felis catus target 116 genomic scaffold
          Length = 376810

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 36     attgcgccagaaataataaga 56
              |||||||||||||||||||||
Sbjct: 236014 attgcgccagaaataataaga 236034

>dbj|AB100014.1| Uncultured bacterium gene for 16S rRNA, partial sequences, clone:
           IndB4-27
          Length = 1298

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 362 cctgtccaaagggcaggttgc 382
           |||||||||||||||||||||
Sbjct: 143 cctgtccaaagggcaggttgc 123

>gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell Park Cancer Institute Mouse BAC)
              complete sequence
          Length = 204950

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 44     agaaataataagaagaaattc 64
              |||||||||||||||||||||
Sbjct: 150035 agaaataataagaagaaattc 150015

>gb|AC151754.1| Ornithorhynchus anatinus chromosome UNK clone OABb-469A1, complete
              sequence
          Length = 138437

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 357    tggttcctgtccaaagggcaggtt 380
              ||||| ||||||||||||||||||
Sbjct: 136471 tggtttctgtccaaagggcaggtt 136494

>gb|AY509596.1| Homo sapiens transcription factor Dp-2 (E2F dimerization partner 2)
             (TFDP2) gene, complete cds
          Length = 81085

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   tccactgcatgcccctgccc 281
             ||||||||||||||||||||
Sbjct: 72006 tccactgcatgcccctgccc 72025

>gb|AC112504.6| Homo sapiens 3 BAC RP11-271K21 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 215077

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 262  tccactgcatgcccctgccc 281
            ||||||||||||||||||||
Sbjct: 2968 tccactgcatgcccctgccc 2987

>gb|AC004692.2| Homo sapiens PAC clone RP5-1107K12 from 7, complete sequence
          Length = 126579

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    agaaataataagaagaaatt 63
             ||||||||||||||||||||
Sbjct: 16822 agaaataataagaagaaatt 16803

>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence
          Length = 338007

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     cgccgcaagagcgcacgcac 105
              ||||||||||||||||||||
Sbjct: 321170 cgccgcaagagcgcacgcac 321189

>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2
          Length = 223670

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 159    tccgatgccaagcaagctgc 178
              ||||||||||||||||||||
Sbjct: 121610 tccgatgccaagcaagctgc 121629

>gb|AC107964.4| Homo sapiens chromosome 8, clone CTD-2328I8, complete sequence
          Length = 138594

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 372    gggcaggttgctgcttccat 391
              ||||||||||||||||||||
Sbjct: 108753 gggcaggttgctgcttccat 108734

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 247      gtctgccccacgtcctccac 266
                ||||||||||||||||||||
Sbjct: 16504866 gtctgccccacgtcctccac 16504847

>gb|AC012668.13| Homo sapiens BAC clone RP11-458D8 from 2, complete sequence
          Length = 192396

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    aatggcagagctgacaccca 151
              ||||||||||||||||||||
Sbjct: 154067 aatggcagagctgacaccca 154048

>dbj|AP004767.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1460_H08
          Length = 113514

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   gtctgccccacgtcctccac 266
             ||||||||||||||||||||
Sbjct: 25536 gtctgccccacgtcctccac 25517

>dbj|AK103327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125L14, full
           insert sequence
          Length = 4166

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 gcaggttgctgcttccatgc 393
           ||||||||||||||||||||
Sbjct: 630 gcaggttgctgcttccatgc 649

>emb|AL844145.9| Mouse DNA sequence from clone RP23-403F4 on chromosome 2, complete
             sequence
          Length = 173053

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    agaaataataagaagaaatt 63
             ||||||||||||||||||||
Sbjct: 39583 agaaataataagaagaaatt 39564

>emb|AL772210.8| Mouse DNA sequence from clone RP23-407G17 on chromosome 4, complete
              sequence
          Length = 143653

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 54     agaagaaattcgagaaatcatcag 77
              ||||||||||| ||||||||||||
Sbjct: 124712 agaagaaattcaagaaatcatcag 124689

>emb|AL672064.17| Mouse DNA sequence from clone RP23-91G19 on chromosome X, complete
             sequence
          Length = 152177

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    ccagaaataataagaagaaa 61
             ||||||||||||||||||||
Sbjct: 96816 ccagaaataataagaagaaa 96797


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,375,703
Number of Sequences: 3902068
Number of extensions: 3375703
Number of successful extensions: 73580
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73384
Number of HSP's gapped (non-prelim): 196
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)