ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart39a09 |
|---|---|
| Clone Library Name | barley_pub |
>ANTA_GENTR (Q9ZWR8) Anthocyanin 5-aromatic acyltransferase (EC 2.3.1.153)| (5AT) Length = 469 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 4/122 (3%) Frame = -1 Query: 464 CLAKATARDLLAVDGFXXXXXXXXXXXXXXXEDPLALW----DWMDLLSWLPMDRMVNIS 297 C+AKAT ++L+ G + + W+ + +P R + I+ Sbjct: 341 CVAKATHKELVGDKGLLVAVAAIGEAIEKRLHNEKGVLADAKTWLSESNGIPSKRFLGIT 400 Query: 296 GSPRYPAYEVADFGWGAPSRTELITMNNCGQVVLVAAKGGGGSVQASVCMHPDHMGAFKS 117 GSP++ +Y V DFGWG P++ ++ +++ + ++ ++ V+ V + HM AF Sbjct: 401 GSPKFDSYGV-DFGWGKPAKFDITSVDYAELIYVIQSRDFEKGVEIGVSLPKIHMDAFAK 459 Query: 116 HF 111 F Sbjct: 460 IF 461
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 43.5 bits (101), Expect = 3e-04 Identities = 18/55 (32%), Positives = 30/55 (54%) Frame = -1 Query: 275 YEVADFGWGAPSRTELITMNNCGQVVLVAAKGGGGSVQASVCMHPDHMGAFKSHF 111 Y+ DFGWG P+ + + GQ L+ ++ G GS+ ++ + H+ FK HF Sbjct: 388 YQAMDFGWGNPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHLSLFKKHF 442
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 42.4 bits (98), Expect = 6e-04 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = -1 Query: 275 YEVADFGWGAPSRTELITMNNCGQVVLVAAKGGGGSVQASVCMHPDHMGAFKSHF 111 Y+ DFGWG+P+ + + GQ L+ ++ G GS+ ++ + H+ FK +F Sbjct: 389 YQAMDFGWGSPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHLSLFKKYF 443
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 42.4 bits (98), Expect = 6e-04 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = -1 Query: 275 YEVADFGWGAPSRTELITMNNCGQVVLVAAKGGGGSVQASVCMHPDHMGAFKSHF 111 Y+ DFGWG+P+ + + GQ L+ ++ G GS+ ++ + H+ FK +F Sbjct: 388 YQAMDFGWGSPTFFGISNIFYDGQCFLIPSRDGDGSMTLAINLFSSHLSRFKKYF 442
>POLG_HCVIN (Q913D4) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3010 Score = 33.9 bits (76), Expect = 0.21 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = -2 Query: 412 PPRRRCSGRSAARPRTRSP-FGTGWTCCRGCQWTGW*TSPGHRGTRRTRWPT 260 P RR GRS A+P P +G GC W GW SP RG+R +R P+ Sbjct: 65 PKARRPEGRSWAQPGYPWPLYGN-----EGCGWAGWLLSP--RGSRPSRGPS 109
>POLG_HCVJ8 (P26661) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3032 Score = 32.3 bits (72), Expect = 0.62 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -2 Query: 412 PPRRRCSGRSAARPRTRSP-FGTGWTCCRGCQWTGW*TSPGHRGTRRTRWPT 260 P RR +G+S +P P +G GC W GW SP RG+R T PT Sbjct: 65 PKDRRSTGKSWGKPGYPWPLYGN-----EGCGWAGWLLSP--RGSRPTWGPT 109
>POLG_HCVJ7 (P27961) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70)] (Fragment) Length = 736 Score = 32.3 bits (72), Expect = 0.62 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -2 Query: 412 PPRRRCSGRSAARPRTRSP-FGTGWTCCRGCQWTGW*TSPGHRGTRRTRWPT 260 P RR +G+S +P P +G GC W GW SP RG+R T PT Sbjct: 65 PKDRRSTGKSWGKPGYPWPLYGN-----EGCGWAGWLLSP--RGSRPTWGPT 109
>POLG_HCVH (P27958) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/NT Length = 3010 Score = 31.6 bits (70), Expect = 1.0 Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Frame = -2 Query: 418 SQPPRRRCSGRSAARP--RTRSPFGTGWTCC--RGCQWTGW*TSPGHRGTRRTRWPT 260 SQP RR A RP RT + G W GC W GW SP RG+R + PT Sbjct: 55 SQPRGRRQPIPKARRPEGRTWAQPGYPWPLYGNEGCGWAGWLLSP--RGSRPSWGPT 109
>POLG_HCV1 (P26664) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/NT Length = 3010 Score = 31.6 bits (70), Expect = 1.0 Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Frame = -2 Query: 418 SQPPRRRCSGRSAARP--RTRSPFGTGWTCC--RGCQWTGW*TSPGHRGTRRTRWPT 260 SQP RR A RP RT + G W GC W GW SP RG+R + PT Sbjct: 55 SQPRGRRQPIPKARRPEGRTWAQPGYPWPLYGNEGCGWAGWLLSP--RGSRPSWGPT 109
>POLG_HCVED (O39929) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3007 Score = 31.6 bits (70), Expect = 1.0 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Frame = -2 Query: 412 PPRRRCSGRSAARPRTRSP-FGTGWTCCRGCQWTGW*TSPGHRGTRRTRWPTS--GGVRQ 242 P RR GRS A+P P +G GC W GW SP RG+R + P G R Sbjct: 65 PKARRPEGRSWAQPGYPWPLYGN-----EGCGWAGWLLSP--RGSRPSWGPNDPRGRSRN 117 Query: 241 VGR 233 +G+ Sbjct: 118 LGK 120
>POLG_HCVNZ (Q81258) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3020 Score = 31.2 bits (69), Expect = 1.4 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = -2 Query: 412 PPRRRCSGRSAARPRTRSP-FGTGWTCCRGCQWTGW*TSPGHRGTRRTRWP 263 P RR GRS A+P P +G GC W GW SP RG+R + P Sbjct: 65 PKARRSEGRSWAQPGYPWPLYGN-----EGCGWAGWLLSP--RGSRPSWGP 108
>K0553_HUMAN (Q9UKJ3) Protein KIAA0553| Length = 1089 Score = 31.2 bits (69), Expect = 1.4 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 4/78 (5%) Frame = +3 Query: 132 HVIRVHAHGCLHAAAPALSGHEHHLP-AIVHGDQLRPTWRTPPEVGHLVRRV-PR*PGD- 302 H I H H AAA + H H P A VH + TP + HL + P P Sbjct: 964 HAILQH-HAAAAAAAIGIHPHPHPQPLAQVH--HIPQPHLTPISLSHLTHSIIPGHPATF 1020 Query: 303 -VHHPVHWQPRQQVHPVP 353 HP+H P +HP P Sbjct: 1021 LASHPIHIIPASAIHPGP 1038
>P_HUMAN (Q04671) P protein (Melanocyte-specific transporter protein)| (Pink-eyed dilution protein homolog) Length = 838 Score = 31.2 bits (69), Expect = 1.4 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Frame = +3 Query: 135 VIRVHAHGCLHAAAPALSGHEHHLPA-IVHGDQLRPTWRTPPEVGHLVRRVPR*PGDVHH 311 +++V G L A+ P+ G E H+ + D L WR P +V H + Sbjct: 227 LLQVDLAGALVASGPSRPGREEHIVVELTQADALGSRWRRPQQVTH------------NW 274 Query: 312 PVHWQPRQQVHPV 350 V+ PR+ H V Sbjct: 275 TVYLNPRRSEHSV 287
>POLG_HCVK3 (Q81495) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3020 Score = 30.8 bits (68), Expect = 1.8 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -2 Query: 412 PPRRRCSGRSAARPRTRSP-FGTGWTCCRGCQWTGW*TSPGHRGTR 278 P RR GRS A+P P +G GC W GW SP RG+R Sbjct: 65 PKARRSEGRSWAQPGYPWPLYGN-----EGCGWAGWLLSP--RGSR 103
>HRG_BOVIN (P33433) Histidine-rich glycoprotein (Histidine-proline-rich| glycoprotein) (HPRG) (Fragments) Length = 396 Score = 30.8 bits (68), Expect = 1.8 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 6/63 (9%) Frame = +3 Query: 192 HEHHLPA---IVHGDQLRPTWRTPPEVGHLVRRVPR*PGDVHHPVHWQPRQQVHPVP--- 353 H HH P HG P R PP R PG H HW+P +H +P Sbjct: 282 HGHHPPDNDFYDHGPCDPPPHRPPPR-----HSKERGPGKGHFRFHWRPTGYIHRLPSLK 336 Query: 354 KGE 362 KGE Sbjct: 337 KGE 339
>POLG_HCVH9 (Q81754) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3010 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -2 Query: 412 PPRRRCSGRSAARPRTRSP-FGTGWTCCRGCQWTGW*TSPGHRGTRRTRWPT 260 P RR GRS A+P P +G GC W GW SP RG+R + P+ Sbjct: 65 PKARRPEGRSWAQPGYPWPLYGN-----EGCGWAGWLLSP--RGSRPSWGPS 109
>POLG_HCVJK (Q68801) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3018 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = -2 Query: 412 PPRRRCSGRSAARPRTRSP-FGTGWTCCRGCQWTGW*TSPGHRGTRRTRWP 263 P RR GRS A+P P +G GC W GW SP RG+R + P Sbjct: 65 PRARRTEGRSWAQPGYPWPLYGN-----EGCGWAGWLLSP--RGSRPSWGP 108
>POLG_HCVJP (Q9DHD6) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3032 Score = 30.8 bits (68), Expect = 1.8 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -2 Query: 412 PPRRRCSGRSAARPRTRSP-FGTGWTCCRGCQWTGW*TSPGHRGTRRTRWPT 260 P RR +G+S +P P +G GC W GW SP RG+R T P+ Sbjct: 65 PKDRRSTGKSWGKPGYPWPLYGN-----EGCGWAGWLLSP--RGSRPTWGPS 109
>RNH2_ANADE (Q2IMM4) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 283 Score = 30.8 bits (68), Expect = 1.8 Identities = 20/64 (31%), Positives = 27/64 (42%) Frame = +3 Query: 213 IVHGDQLRPTWRTPPEVGHLVRRVPR*PGDVHHPVHWQPRQQVHPVPKGERVLGRAADLP 392 IVHGD L T + R D+ HP + R + +P + LGR P Sbjct: 190 IVHGDALSLTIAAASILAKTARDALMAELDLAHPGYGFARHKGYPTAEHFDALGRLGACP 249 Query: 393 LHRR 404 +HRR Sbjct: 250 IHRR 253
>P5I11_HUMAN (O14683) Tumor protein p53-inducible protein 11 (p53-induced| protein 11) Length = 177 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = -2 Query: 424 MASQPPRRRCSGRSAARPRTRSPFGTGWTCCRGCQW-TGW*TSPG 293 +AS P RC +S+ RP+TRSP G +W GW S G Sbjct: 6 VASPSPGDRCREKSSPRPQTRSPI-------TGIEWEDGWRVSIG 43
>ZMY10_HUMAN (O75800) Zinc finger MYND domain-containing protein 10 (BLu| protein) Length = 440 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/38 (39%), Positives = 17/38 (44%) Frame = -2 Query: 421 ASQPPRRRCSGRSAARPRTRSPFGTGWTCCRGCQWTGW 308 A P R RC+ SA + S W CCR CQ W Sbjct: 386 AVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHW 423
>POLG_HCVJL (Q68798) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3021 Score = 30.4 bits (67), Expect = 2.3 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = -2 Query: 412 PPRRRCSGRSAARPRTRSPFGTGWTCC--RGCQWTGW*TSPGHRGTRRTRWP 263 P RR +GR+ +P G W GC W GW SP RG+R T P Sbjct: 65 PKARRQTGRAWGQP------GYAWPLYGNEGCGWAGWLLSP--RGSRPTWGP 108
>RGS19_RAT (O70521) Regulator of G-protein signaling 19 (RGS19)| (G-alpha-interacting protein) (GAIP protein) Length = 216 Score = 30.0 bits (66), Expect = 3.1 Identities = 11/35 (31%), Positives = 16/35 (45%) Frame = -2 Query: 421 ASQPPRRRCSGRSAARPRTRSPFGTGWTCCRGCQW 317 A +PP + + P +R+P W CC C W Sbjct: 17 ADRPPSMSSHDAAPSGPPSRNPCCLCWCCCCSCSW 51
>RGS19_MOUSE (Q9CX84) Regulator of G-protein signaling 19 (RGS19)| Length = 216 Score = 30.0 bits (66), Expect = 3.1 Identities = 11/35 (31%), Positives = 16/35 (45%) Frame = -2 Query: 421 ASQPPRRRCSGRSAARPRTRSPFGTGWTCCRGCQW 317 A +PP + + P +R+P W CC C W Sbjct: 17 ADRPPSMSSHDAAPSGPPSRNPCCLCWCCCCSCSW 51
>POLG_HCVVP (O92532) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3014 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 9/52 (17%) Frame = -2 Query: 406 RRRCSGRSAARPRTRSPFGTGWTCC---------RGCQWTGW*TSPGHRGTR 278 R + GR P+ R P G W GC W GW SP RG+R Sbjct: 54 RSQPRGRRQPIPKARQPIGRSWGQPGYPWPLYGNEGCGWAGWLLSP--RGSR 103
>POLG_HCVEU (O39927) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3017 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 9/52 (17%) Frame = -2 Query: 406 RRRCSGRSAARPRTRSPFGTGWTC---------CRGCQWTGW*TSPGHRGTR 278 R + GR P+ R P G W GC W GW SP RG+R Sbjct: 54 RSQPRGRRQPIPKARQPQGRHWAQPGYPWPLYGSEGCGWAGWLLSP--RGSR 103
>FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription factor FKH-4)| Length = 428 Score = 29.6 bits (65), Expect = 4.0 Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 4/68 (5%) Frame = +3 Query: 156 GCLHAAAP--ALSGHEHHLPAIVHGDQLRPTWRTPPEVGHLVRRVPR*PGDVHHPVHW-- 323 G LH P A H HH A H P PP H+V + P P H Sbjct: 134 GHLHPHHPHHAHHHHHHHHHAAHHHHHHHPPQPPPPPPPHMVPYFHQQPAPAPQPPHLPS 193 Query: 324 QPRQQVHP 347 QP QQ P Sbjct: 194 QPAQQPQP 201
>POLG_HCVGL (Q5EG65) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23)] (Fragment) Length = 828 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 9/57 (15%) Frame = -2 Query: 406 RRRCSGRSAARPRTRSPFGTGWTCC---------RGCQWTGW*TSPGHRGTRRTRWP 263 R + GR P+ R P G W GC W GW SP RG+R + P Sbjct: 54 RSQPRGRRQPIPKARRPKGRNWAQPGYPWPLYGNEGCGWAGWLPSP--RGSRPSWGP 108
>E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C)| Length = 1412 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +3 Query: 246 RTPPEVGHLVRRVPR*PGDVHHPVHWQPRQQVHPVP 353 RT P HL RR P +HH QP++Q P P Sbjct: 157 RTLPSNQHLSRRHSASPSALHHYQQQQPQRQQSPPP 192
>DNAJ_GLOVI (Q7NDG8) Chaperone protein dnaJ| Length = 383 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%) Frame = -2 Query: 403 RRCSGRSAARPRTRSPFG--TGWTCCRGCQWTG 311 R C G+ R R+PFG T C CQ TG Sbjct: 170 RNCGGQGQIRQARRTPFGLFTQVAACPNCQGTG 202
>POLG_HCV6A (Q5I2N3) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3018 Score = 28.9 bits (63), Expect = 6.8 Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 9/52 (17%) Frame = -2 Query: 406 RRRCSGRSAARPRTRSPFGTGWTCC---------RGCQWTGW*TSPGHRGTR 278 R + GR P+ R P G W GC W GW SP RG+R Sbjct: 54 RSQPRGRRQPIPKARQPQGRHWAQPGYPWPLYGNEGCGWAGWLLSP--RGSR 103
>POLG_HCVVN (O92530) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3012 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -2 Query: 412 PPRRRCSGRSAARPRTRSP-FGTGWTCCRGCQWTGW*TSPGHRGTR 278 P RR +GR+ A+P P +G GC W GW SP RG+R Sbjct: 65 PKARRQTGRTWAQPGYPWPLYGN-----EGCGWMGWLLSP--RGSR 103
>Y763_TREPA (O83744) Hypothetical protein TP0763| Length = 313 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +3 Query: 108 KKVRLERAHVIRVHAHGCLHAAAPALSGHEHHLP 209 +K+R AH ++ A GC HAA H H+ P Sbjct: 248 EKLRRAPAHDAQLIARGCAHAAQVRADVHAHYTP 281
>ZMY10_MOUSE (Q99ML0) Zinc finger MYND domain-containing protein 10 (BLu| protein) Length = 440 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/38 (36%), Positives = 16/38 (42%) Frame = -2 Query: 421 ASQPPRRRCSGRSAARPRTRSPFGTGWTCCRGCQWTGW 308 A P R RC +A + S W CCR CQ W Sbjct: 386 AVAPERPRCGYCNAEASKRCSRCQNVWYCCRECQVKHW 423
>TF7L2_MOUSE (Q924A0) Transcription factor 7-like 2 (HMG box transcription| factor 4) (T-cell-specific transcription factor 4) (TCF-4) (mTCF-4) Length = 459 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = +3 Query: 201 HLPAIVHGDQLRPTWRTPPEVGHLVRRVPR*PGDVHHPVHWQPRQQVHPV 350 HLPA V P PP++ P G + HP+ W QQ PV Sbjct: 196 HLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPV 245
>HUTG_VIBPA (Q87Q75) Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase)| (Formiminoglutamate hydrolase) Length = 340 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = +3 Query: 303 VHHPVHWQPRQQVHPVPKGERVLGRAADLPLHRRRGGCEAIYGEEVPRRGL 455 +HH V Q ++ +G +LG A D + R +G A ++ RR L Sbjct: 28 IHHVVKHQKTSELEKASQGVSILGFATDAGVARNKGRIGAKKAPDLIRRAL 78
>CATE_PSEPU (P95539) Catalase HPII (EC 1.11.1.6)| Length = 711 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = +3 Query: 318 HWQPRQQVHPV--PKGERVLGRAADLPLHRRRGGCEAIYGEEVPRRGLG 458 HW+PRQ VH + + +++ G+ D +RR EAI + P LG Sbjct: 256 HWKPRQGVHSLLWDEAQKLAGKDTDF---QRRDLWEAIENGDYPEWELG 301
>TF7L2_HUMAN (Q9NQB0) Transcription factor 7-like 2 (HMG box transcription| factor 4) (T-cell-specific transcription factor 4) (TCF-4) (hTCF-4) Length = 619 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = +3 Query: 201 HLPAIVHGDQLRPTWRTPPEVGHLVRRVPR*PGDVHHPVHWQPRQQVHPV 350 HLPA V P PP++ P G + HP+ W QQ PV Sbjct: 219 HLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPV 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,158,680 Number of Sequences: 219361 Number of extensions: 1339227 Number of successful extensions: 3633 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 3509 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3632 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
