ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart39a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
2gb|AY103836.1| Zea mays PCO135053 mRNA sequence 163 7e-37
3gb|AY781902.1| Saccharum hybrid cultivar isolate c57 auxin-induc... 147 4e-32
4ref|XM_468970.1| Oryza sativa (japonica cultivar-group), mRNA 109 9e-21
5emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides m... 107 4e-20
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 100 9e-18
8emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb... 100 9e-18
9gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced prote... 98 4e-17
10emb|AJ843999.1| Plantago major mRNA for auxin resistance protein... 96 1e-16
11gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protei... 90 9e-15
12dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypoc... 90 9e-15
13dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone... 68 3e-08
14ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription facto... 66 1e-07
15ref|NM_117535.4| Arabidopsis thaliana IAA14 (SOLITARY ROOT); tra... 66 1e-07
16gb|AF334718.1| Arabidopsis thaliana IAA14 (At4g14550) mRNA, comp... 66 1e-07
17gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, com... 66 1e-07
18gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, com... 66 1e-07
19dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced prot... 66 1e-07
20gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induc... 66 1e-07
21emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
22emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
23gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete s... 66 1e-07
24gb|U18416.1|ATU18416 Arabidopsis thaliana IAA14 (IAA14) gene, pa... 66 1e-07
25gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (I... 66 1e-07
26ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA 60 8e-06
27gb|AY137961.1| Mirabilis jalapa clone SM-36 Aux/IAA1 mRNA, parti... 60 8e-06
28gb|AY129669.1| Mirabilis jalapa auxin-responsive protein IAA1 mR... 60 8e-06
29emb|BX827786.1|CNS0A3TV Arabidopsis thaliana Full-length cDNA Co... 60 8e-06
30emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative ... 60 8e-06
31dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
32dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
33dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
34gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated pro... 58 3e-05
35gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, parti... 54 5e-04
36emb|AJ306825.1|PTR306825 Populus tremula x Populus tremuloides m... 54 5e-04
37gb|DQ191056.1| Glycine max clone DD8.1 SP-6 mRNA, complete cds 50 0.007
38gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds 50 0.007
39emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides m... 50 0.007
40gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRN... 50 0.007
41gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regul... 48 0.029
42emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1... 48 0.029
43ref|NM_100306.2| Arabidopsis thaliana AXR3 (AUXIN RESISTANT 3); ... 46 0.11
44gb|AC115751.6| Mus musculus chromosome 1, clone RP23-16I21, comp... 46 0.11
45gb|AC138640.7| Mus musculus chromosome 1, clone RP23-463G19, com... 46 0.11
46gb|AF336916.1| Arabidopsis thaliana auxin-induced protein, IAA17... 46 0.11
47gb|AY117183.1| Arabidopsis thaliana auxin-induced protein IAA17/... 46 0.11
48gb|AY070094.1| Arabidopsis thaliana auxin-induced protein IAA17/... 46 0.11
49emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in ... 46 0.11
50dbj|AK221076.1| Arabidopsis thaliana mRNA for putative auxin-ind... 46 0.11
51gb|AY087284.1| Arabidopsis thaliana clone 33613 mRNA, complete s... 46 0.11
52gb|U49073.1|ATU49073 Arabidopsis thaliana early auxin-induced (I... 46 0.11
53emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA ... 44 0.45
54emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, ... 44 0.45
55gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, compl... 44 0.45
56gb|AF123504.1|AF123504 Nicotiana tabacum Nt-iaa2.3 deduced prote... 44 0.45
57ref|NM_123385.2| Arabidopsis thaliana unknown protein AT5G40210 ... 42 1.8
58ref|XM_513609.1| PREDICTED: Pan troglodytes similar to syntaxin ... 42 1.8
59gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence 42 1.8
60gb|AC091781.20| Trypanosoma brucei chromosome 4 clone RPCI93-30K... 42 1.8
61gb|AC159410.1| Trypanosoma brucei chromosome 4 clone RPCI93-1D20... 42 1.8
62ref|NM_001033838.1| Ciona intestinalis LIM and SH3 protein (lasp... 42 1.8
63gb|AC125781.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
64gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
65gb|AC138767.7| Mus musculus chromosome 12, clone RP23-454K24, co... 42 1.8
66gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated pro... 42 1.8
67gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, comp... 42 1.8
68gb|AC091879.2| Homo sapiens chromosome 5 clone CTD-3136G21, comp... 42 1.8
69gb|AF412089.1|AF412089 Arabidopsis thaliana AT5g40210/MSN9_110 m... 42 1.8
70gb|AC157515.2| Mus musculus BAC clone RP24-226N22 from chromosom... 42 1.8
71dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
72dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
73gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds 42 1.8
74dbj|AB182287.1| Ciona intestinalis mRNA for lasp, complete cds 42 1.8
75gb|AC068121.8| Homo sapiens BAC clone RP11-181P21 from 2, comple... 42 1.8
76dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
77emb|AL672124.13| Mouse DNA sequence from clone RP23-392H8 on chr... 42 1.8
78dbj|AB010699.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.8
79gb|AC105989.14| Mus musculus chromosome 8, clone RP24-95N3, comp... 42 1.8
80emb|AL929326.9| Zebrafish DNA sequence from clone BUSM1-SL11 in ... 42 1.8
81gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
82gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
83gb|AC103379.8| Mus musculus chromosome 13, clone RP24-245I24, co... 40 7.1
84gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.1
85gb|AC132284.5| Mus musculus BAC clone RP24-351O18 from chromosom... 40 7.1
86gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genom... 40 7.1
87emb|CT025566.7| Mouse DNA sequence from clone RP24-151A22 on chr... 40 7.1
88gb|AC121947.2| Mus musculus BAC clone RP24-213L3 from 13, comple... 40 7.1
89ref|XM_652254.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 7.1
90gb|AY337616.1| Gossypium barbadense Gbiaa-Re (iaa-re) mRNA, comp... 40 7.1
91emb|AL513493.11| Human DNA sequence from clone RP11-433N2 on chr... 40 7.1
92emb|AL391994.28| Human DNA sequence from clone RP11-382D8 on chr... 40 7.1
93emb|AL450346.4| Human DNA sequence from clone RP11-184C23 on chr... 40 7.1
94emb|AL357712.10| Human DNA sequence from clone GS1-756B1 on chro... 40 7.1
95emb|AL133380.5| Human DNA sequence from clone RP5-862P8 on chrom... 40 7.1
96emb|AL049541.24|HSJ991B18 Human DNA sequence from clone RP5-991B... 40 7.1
97gb|AC105024.8| Homo sapiens chromosome 17, clone CTD-2132N18, co... 40 7.1
98emb|CR926468.3| Mouse DNA sequence from clone RP24-191A5 on chro... 40 7.1
99emb|BX510641.9| Zebrafish DNA sequence from clone CH211-106M9 in... 40 7.1
100gb|AC010760.8| Homo sapiens chromosome , clone RP11-2F9, complet... 40 7.1
101gb|AC100733.16| Mus musculus chromosome 15, clone RP24-312H21, c... 40 7.1
102dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
103dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
104gb|AY254569.1| Gossypium barbadense auxin responsive protein IAA... 40 7.1
105gb|AC136355.7| Homo sapiens chromosome 15, clone RP11-54M9, comp... 40 7.1
106gb|AC135068.5| Homo sapiens chromosome 15, clone RP11-294C11, co... 40 7.1
107gb|AC134981.6| Homo sapiens chromosome 15, clone RP11-361C13, co... 40 7.1
108gb|AC134980.3| Homo sapiens chromosome 15, clone RP11-69H14, com... 40 7.1
109dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
110emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (c... 40 7.1
111dbj|AK100489.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
112dbj|AK069477.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
113gb|AC171780.2| Homo sapiens chromosome 15, clone RP11-350K22, co... 40 7.1
114gb|AC117708.10| Mus musculus chromosome 7, clone RP23-474J16, co... 40 7.1
115gb|AC171558.2| Homo sapiens chromosome 15, clone RP11-983G14, co... 40 7.1
116emb|AL512310.4|CNS07EF1 Human chromosome 14 DNA sequence BAC R-5... 40 7.1
117dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 7.1
118emb|AL732527.6| Mouse DNA sequence from clone RP23-259B18 on chr... 40 7.1
119emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chro... 40 7.1
120dbj|D86559.1| Glycyrrhiza glabra mRNA for polyketide reductase (... 40 7.1 
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full
            insert sequence
          Length = 1545

 Score =  165 bits (83), Expect = 2e-37
 Identities = 104/111 (93%)
 Strand = Plus / Minus

                                                                        
Query: 414  ctcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatc 473
            ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 1087 ctcagcttctgttcttgcatttctccattgccctcggtgcaaggccaatagcttctgatc 1028

                                                               
Query: 474  ctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacggga 524
            |||||||||||| ||||||||||||||| ||||| ||||||||||| ||||
Sbjct: 1027 ctttcattatcctaaggcgcttgcatgattcaacaaacatctcccatggga 977



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 38/43 (88%), Gaps = 3/43 (6%)
 Strand = Plus / Minus

                                                       
Query: 210  acatgttcttggcttcttctttcttatgtatataacaagatga 252
            ||||||||||||||||||   |||||||||||  |||||||||
Sbjct: 1339 acatgttcttggcttctt---tcttatgtataagacaagatga 1300



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   agggtgcctttgcattttgtgcca 103
            ||||||||||| ||||||||||||
Sbjct: 1442 agggtgcctttacattttgtgcca 1419
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>gb|AY103836.1| Zea mays PCO135053 mRNA sequence
          Length = 1519

 Score =  163 bits (82), Expect = 7e-37
 Identities = 103/110 (93%)
 Strand = Plus / Minus

                                                                       
Query: 413 cctcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgat 472
           |||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 998 cctcagcttctgttcttgcatttctccatggcccttggtgccaggccaatggcttctgat 939

                                                             
Query: 473 cctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgg 522
           |||||||| |||||||||||||||||||| || |||||||||||||||||
Sbjct: 938 cctttcatgatccgaaggcgcttgcatgattcgacgaacatctcccacgg 889



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   agggtgcctttgcattttgtgcca 103
            ||||||||||||||| ||||||||
Sbjct: 1356 agggtgcctttgcatcttgtgcca 1333
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>gb|AY781902.1| Saccharum hybrid cultivar isolate c57 auxin-induced protein mRNA,
           partial cds
          Length = 1046

 Score =  147 bits (74), Expect = 4e-32
 Identities = 101/110 (91%)
 Strand = Plus / Minus

                                                                       
Query: 413 cctcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgat 472
           |||||||| |||||||||||||||||||| ||||| || || |||||||| |||||||||
Sbjct: 571 cctcagcttctgttcttgcatttctccatggccctcggcgcgaggccaatggcttctgat 512

                                                             
Query: 473 cctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgg 522
           |||||||| |||||||||||||||||||| || |||||||||||||||||
Sbjct: 511 cctttcatgatccgaaggcgcttgcatgattcgacgaacatctcccacgg 462



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 80  agggtgcctttgcattttgtgcca 103
           ||||||||||||||||||||||||
Sbjct: 911 agggtgcctttgcattttgtgcca 888



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 292 ccaaaatgacttcactgatcaggagata 319
           |||||||||||||| |||||||||||||
Sbjct: 715 ccaaaatgacttcattgatcaggagata 688



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 37  ataattaaacaacttttgatggacaa 62
           |||| |||||||||||||||||||||
Sbjct: 965 ataagtaaacaacttttgatggacaa 940
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>ref|XM_468970.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 707

 Score =  109 bits (55), Expect = 9e-21
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                       
Query: 426 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 485
           |||||||||||||||  |||||||||||||||||||| ||||| || |||||||| || |
Sbjct: 702 tcttgcatttctccactgcccttggtgcaaggccaatggcttcagaccctttcatgattc 643

                                                  
Query: 486 gaaggcgcttgcatgactcaacgaacatctcccacggga 524
           | ||||| ||||| ||||| |||||||||||||||||||
Sbjct: 642 ggaggcgtttgcacgactcgacgaacatctcccacggga 604
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>emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA6
            gene)
          Length = 1206

 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                        
Query: 426  tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 485
            |||||||||||||||| || ||||||||||| |||| |||||| |||||||||||||| |
Sbjct: 1027 tcttgcatttctccattgctcttggtgcaagtccaacagcttcagatcctttcattatgc 968

                                              
Query: 486  gaaggcgcttgcatgactcaacgaacatctccca 519
            |  ||||||||||||| ||||| |||||||||||
Sbjct: 967  gcgggcgcttgcatgaatcaacaaacatctccca 934
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 59/62 (95%)
 Strand = Plus / Plus

                                                                            
Query: 453      caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 512
                ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 25345133 caaggccaatagcttctgatcctttcattatcctaaggcgcttgcatgattcaacaaaca 25345192

                  
Query: 513      tc 514
                ||
Sbjct: 25345193 tc 25345194



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 414      ctcagctcctgttcttgcatttctccatcgcccttggtgc 453
                ||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 25344953 ctcagcttctgttcttgcatttctccattgccctcggtgc 25344992



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 38/43 (88%), Gaps = 3/43 (6%)
 Strand = Plus / Plus

                                                           
Query: 210      acatgttcttggcttcttctttcttatgtatataacaagatga 252
                ||||||||||||||||||   |||||||||||  |||||||||
Sbjct: 25344701 acatgttcttggcttctt---tcttatgtataagacaagatga 25344740



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 80       agggtgcctttgcattttgtgcca 103
                ||||||||||| ||||||||||||
Sbjct: 25344597 agggtgcctttacattttgtgcca 25344620
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 59/62 (95%)
 Strand = Plus / Plus

                                                                            
Query: 453      caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 512
                ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 25273309 caaggccaatagcttctgatcctttcattatcctaaggcgcttgcatgattcaacaaaca 25273368

                  
Query: 513      tc 514
                ||
Sbjct: 25273369 tc 25273370



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 414      ctcagctcctgttcttgcatttctccatcgcccttggtgc 453
                ||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 25273129 ctcagcttctgttcttgcatttctccattgccctcggtgc 25273168



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 38/43 (88%), Gaps = 3/43 (6%)
 Strand = Plus / Plus

                                                           
Query: 210      acatgttcttggcttcttctttcttatgtatataacaagatga 252
                ||||||||||||||||||   |||||||||||  |||||||||
Sbjct: 25272877 acatgttcttggcttctt---tcttatgtataagacaagatga 25272916



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 80       agggtgcctttgcattttgtgcca 103
                ||||||||||| ||||||||||||
Sbjct: 25272773 agggtgcctttacattttgtgcca 25272796
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>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152914

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 59/62 (95%)
 Strand = Plus / Plus

                                                                         
Query: 453   caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 512
             ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 11943 caaggccaatagcttctgatcctttcattatcctaaggcgcttgcatgattcaacaaaca 12002

               
Query: 513   tc 514
             ||
Sbjct: 12003 tc 12004



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 414   ctcagctcctgttcttgcatttctccatcgcccttggtgc 453
             ||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 11763 ctcagcttctgttcttgcatttctccattgccctcggtgc 11802



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 38/43 (88%), Gaps = 3/43 (6%)
 Strand = Plus / Plus

                                                        
Query: 210   acatgttcttggcttcttctttcttatgtatataacaagatga 252
             ||||||||||||||||||   |||||||||||  |||||||||
Sbjct: 11511 acatgttcttggcttctt---tcttatgtataagacaagatga 11550



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 80    agggtgcctttgcattttgtgcca 103
             ||||||||||| ||||||||||||
Sbjct: 11407 agggtgcctttacattttgtgcca 11430
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>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds
          Length = 884

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 91/105 (86%)
 Strand = Plus / Minus

                                                                       
Query: 415 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 474
           |||||| |||||||||||||||||||  || |||||||| || ||||| || ||||||||
Sbjct: 741 tcagcttctgttcttgcatttctccactgctcttggtgctagtccaattgcctctgatcc 682

                                                        
Query: 475 tttcattatccgaaggcgcttgcatgactcaacgaacatctccca 519
           |||||||||||  | ||| |||||||| ||||| |||||||||||
Sbjct: 681 tttcattatccttaagcgtttgcatgaatcaacaaacatctccca 637
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>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene)
          Length = 1195

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                       
Query: 417 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctt 476
           |||| ||| |||||||||||||||| ||||| |||||||| ||||| || || | |||||
Sbjct: 835 agcttctgctcttgcatttctccatggccctgggtgcaagtccaatggcctcagttcctt 776

                                                           
Query: 477 tcattatccgaaggcgcttgcatgactcaacgaacatctcccacggga 524
           ||||||| || ||||||||||||||  |||| ||||||||||| ||||
Sbjct: 775 tcattatgcgcaggcgcttgcatgatccaacaaacatctcccatggga 728
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>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds
          Length = 943

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                       
Query: 415 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 474
           |||||| |||||||||||||||||||  || |||||||| || ||||| || || |||||
Sbjct: 783 tcagcttctgttcttgcatttctccactgctcttggtgctagtccaatggcctcagatcc 724

                                                        
Query: 475 tttcattatccgaaggcgcttgcatgactcaacgaacatctccca 519
           |||||||||||  | ||| |||||||| ||||| |||||||||||
Sbjct: 723 tttcattatccttaagcgtttgcatgaatcaacaaacatctccca 679
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>dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds
          Length = 1187

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                       
Query: 414 ctcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatc 473
           ||||||| || ||||||||||||||||| |||||||||||||| ||||| || |||  ||
Sbjct: 825 ctcagcttctattcttgcatttctccatagcccttggtgcaagtccaatggcctcttttc 766

                                                            
Query: 474 ctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgg 522
           ||||||| || || || || ||||| || ||||| ||||||||||||||
Sbjct: 765 ctttcatgatacgtagacgtttgcaagattcaacaaacatctcccacgg 717
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>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071,
             complete sequence
          Length = 69786

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                         
Query: 453   caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 512
             |||| ||||| |||||||||||||||||||| || ||||| ||||||||| |||| ||||
Sbjct: 23388 caagaccaattgcttctgatcctttcattattcgcaggcgtttgcatgacccaacaaaca 23329

               
Query: 513   tc 514
             ||
Sbjct: 23328 tc 23327



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 414   ctcagctcctgttcttgcatttctccatcgcccttggtgc 453
             ||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 23559 ctcagcttctgtttttgcatttctccatggctcttggtgc 23520
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>ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription factor AT3G04730 (IAA16)
           mRNA, complete cds
          Length = 1279

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 891 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 832

                                                    
Query: 482 atccgaaggcgcttgcatgactcaacgaacatctcccacgg 522
           || || |  || |||||||| ||||| ||||||||||||||
Sbjct: 831 attcgtatacgtttgcatgaatcaacaaacatctcccacgg 791
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>ref|NM_117535.4| Arabidopsis thaliana IAA14 (SOLITARY ROOT); transcription factor
           AT4G14550 (IAA14) mRNA, complete cds
          Length = 1482

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||| | |||||||| || ||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 776 ctgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatt 717

                                            
Query: 482 atccgaaggcgcttgcatgactcaacgaacatc 514
           || || |  || ||||||||||| || ||||||
Sbjct: 716 atgcgcaaacgtttgcatgactcgacaaacatc 684
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>gb|AF334718.1| Arabidopsis thaliana IAA14 (At4g14550) mRNA, complete cds
          Length = 687

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||| | |||||||| || ||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 680 ctgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatt 621

                                            
Query: 482 atccgaaggcgcttgcatgactcaacgaacatc 514
           || || |  || ||||||||||| || ||||||
Sbjct: 620 atgcgcaaacgtttgcatgactcgacaaacatc 588
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>gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, complete cds
          Length = 711

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 704 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 645

                                                    
Query: 482 atccgaaggcgcttgcatgactcaacgaacatctcccacgg 522
           || || |  || |||||||| ||||| ||||||||||||||
Sbjct: 644 attcgtatacgtttgcatgaatcaacaaacatctcccacgg 604
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>gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, complete cds
          Length = 1261

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 887 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 828

                                                    
Query: 482 atccgaaggcgcttgcatgactcaacgaacatctcccacgg 522
           || || |  || |||||||| ||||| ||||||||||||||
Sbjct: 827 attcgtatacgtttgcatgaatcaacaaacatctcccacgg 787
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>dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced protein, complete cds,
           clone: RAFL22-51-M14
          Length = 519

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 244 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 185

                                                    
Query: 482 atccgaaggcgcttgcatgactcaacgaacatctcccacgg 522
           || || |  || |||||||| ||||| ||||||||||||||
Sbjct: 184 attcgtatacgtttgcatgaatcaacaaacatctcccacgg 144
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>gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induced protein IAA16
           (At3g04730) mRNA, complete cds
          Length = 711

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 704 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 645

                                                    
Query: 482 atccgaaggcgcttgcatgactcaacgaacatctcccacgg 522
           || || |  || |||||||| ||||| ||||||||||||||
Sbjct: 644 attcgtatacgtttgcatgaatcaacaaacatctcccacgg 604
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>emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS9ZF01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1096

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 846 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 787

                                                    
Query: 482 atccgaaggcgcttgcatgactcaacgaacatctcccacgg 522
           || || |  || |||||||| ||||| ||||||||||||||
Sbjct: 786 attcgtatacgtttgcatgaatcaacaaacatctcccacgg 746
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>emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH58ZC08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1234

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 875 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 816

                                                    
Query: 482 atccgaaggcgcttgcatgactcaacgaacatctcccacgg 522
           || || |  || |||||||| ||||| ||||||||||||||
Sbjct: 815 attcgtatacgtttgcatgaatcaacaaacatctcccacgg 775
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>gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete sequence
          Length = 1140

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 891 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 832

                                                    
Query: 482 atccgaaggcgcttgcatgactcaacgaacatctcccacgg 522
           || || |  || |||||||| ||||| ||||||||||||||
Sbjct: 831 attcgtatacgtttgcatgaatcaacaaacatctcccacgg 791
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>gb|U18416.1|ATU18416 Arabidopsis thaliana IAA14 (IAA14) gene, partial cds
          Length = 732

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||| | |||||||| || ||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 488 ctgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatt 429

                                            
Query: 482 atccgaaggcgcttgcatgactcaacgaacatc 514
           || || |  || ||||||||||| || ||||||
Sbjct: 428 atgcgcaaacgtttgcatgactcgacaaacatc 396
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>gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (IAA16) mRNA, complete cds
          Length = 1169

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 870 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 811

                                                    
Query: 482 atccgaaggcgcttgcatgactcaacgaacatctcccacgg 522
           || || |  || |||||||| ||||| ||||||||||||||
Sbjct: 810 attcgtatacgtttgcatgaatcaacaaacatctcccacgg 770
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>ref|XM_469684.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 811

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 415 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 474
           ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || ||
Sbjct: 811 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 752

                                                             
Query: 475 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacggga 524
            ||||| ||||  | ||| ||||||||||| || ||||||| ||||||||
Sbjct: 751 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacggga 702
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>gb|AY137961.1| Mirabilis jalapa clone SM-36 Aux/IAA1 mRNA, partial cds
          Length = 291

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 81/98 (82%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||||| |||||||| || ||||| ||||| |||  ||| |||  ||||||||| 
Sbjct: 287 ctgttcttgcacttctccatggctcttggagcaagtccagcagcctcttttcctttcatg 228

                                                 
Query: 482 atccgaaggcgcttgcatgactcaacgaacatctccca 519
           || ||||| |  ||||||||||| || |||||||||||
Sbjct: 227 atgcgaagccttttgcatgactccacaaacatctccca 190
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>gb|AY129669.1| Mirabilis jalapa auxin-responsive protein IAA1 mRNA, partial cds
          Length = 990

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 81/98 (82%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||||| |||||||| || ||||| ||||| |||  ||| |||  ||||||||| 
Sbjct: 578 ctgttcttgcacttctccatggctcttggagcaagtccagcagcctcttttcctttcatg 519

                                                 
Query: 482 atccgaaggcgcttgcatgactcaacgaacatctccca 519
           || ||||| |  ||||||||||| || |||||||||||
Sbjct: 518 atgcgaagccttttgcatgactccacaaacatctccca 481
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>emb|BX827786.1|CNS0A3TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH21ZC02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1476

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||| | |||||||| || ||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 769 ctgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatt 710

             
Query: 482 at 483
           ||
Sbjct: 709 at 708
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>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene)
          Length = 1068

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 415 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 474
           ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || ||
Sbjct: 863 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 804

                                                             
Query: 475 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacggga 524
            ||||| ||||  | ||| ||||||||||| || ||||||| ||||||||
Sbjct: 803 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacggga 754
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>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full
           insert sequence
          Length = 1092

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 415 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 474
           ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || ||
Sbjct: 873 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 814

                                                             
Query: 475 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacggga 524
            ||||| ||||  | ||| ||||||||||| || ||||||| ||||||||
Sbjct: 813 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacggga 764
to top
>dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A04, full
           insert sequence
          Length = 430

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 415 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 474
           ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || ||
Sbjct: 136 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 77

                                                             
Query: 475 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacggga 524
            ||||| ||||  | ||| ||||||||||| || ||||||| ||||||||
Sbjct: 76  cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacggga 27
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>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full
           insert sequence
          Length = 1180

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                       
Query: 415 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 474
           ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || ||
Sbjct: 868 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 809

                                                             
Query: 475 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacggga 524
            ||||| ||||  | ||| ||||||||||| || ||||||| ||||||||
Sbjct: 808 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacggga 759
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>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA,
           complete cds
          Length = 1126

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                       
Query: 431 catttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatccgaagg 490
           ||||||||||| || |  |||||||| ||  | ||||||| ||||||||| || ||||||
Sbjct: 731 catttctccatggctcgaggtgcaagtccctttgcttctgttcctttcataatacgaagg 672

                                        
Query: 491 cgcttgcatgactcaacgaacatctccca 519
           ||||| ||||| ||||| |||||| ||||
Sbjct: 671 cgcttacatgattcaacaaacatccccca 643
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>gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, partial cds
          Length = 301

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 461 atagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaacatctccca 519
           |||||||||||||| |||||||| ||||| || ||||| || |  ||||||||||||||
Sbjct: 101 atagcttctgatcccttcattatacgaagacgtttgcacgagttcacgaacatctccca 43
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>emb|AJ306825.1|PTR306825 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA2
            gene)
          Length = 1763

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 420  tcctgttcttgcatttctccatcgcccttggtgcaaggccaat 462
            ||||||| |||||||||||||| |||||||| || ||||||||
Sbjct: 1280 tcctgtttttgcatttctccatggcccttggggctaggccaat 1238
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>gb|DQ191056.1| Glycine max clone DD8.1 SP-6 mRNA, complete cds
          Length = 402

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 417 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaa 461
           |||||||||||||||||||  |||| || ||||||||||| ||||
Sbjct: 310 agctcctgttcttgcattttgccatggctcttggtgcaagaccaa 266
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>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds
          Length = 478

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 417 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaa 461
           |||||||||||||||||||  |||| || ||||||||||| ||||
Sbjct: 391 agctcctgttcttgcattttgccatggctcttggtgcaagaccaa 347
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>emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides mRNA for aux/IAA protein
           (IAA7 gene)
          Length = 1178

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 472 tcctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacggga 524
           |||||||||||| || || ||||||||||| ||||| ||||| ||||| ||||
Sbjct: 705 tcctttcattattcgcagccgcttgcatgattcaacaaacatgtcccatggga 653
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>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds
          Length = 1784

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 417  agctcctgttcttgcatttctccatcgcccttggtgcaaggccaa 461
            |||||||||||||||||||  |||| || ||||||||||| ||||
Sbjct: 1241 agctcctgttcttgcattttgccatggctcttggtgcaagaccaa 1197
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>gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regulated protein
           (IAA1) mRNA, complete cds
          Length = 1313

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 481
           ||||||||||| |||||||  || ||||| || || ||||| || || || |||||||| 
Sbjct: 875 ctgttcttgcacttctccacagctcttggggcgagtccaatggcctcagaccctttcatg 816

                                           
Query: 482 atccgaaggcgcttgcatgactcaacgaacat 513
           ||||  | |||||||||||| ||||| |||||
Sbjct: 815 atcctcaagcgcttgcatgaatcaacaaacat 784
to top
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein
          Length = 1104

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 87/108 (80%)
 Strand = Plus / Minus

                                                                       
Query: 417 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctt 476
           ||||| |||||||| | || ||| | |||||||||||||| || || ||||| || || |
Sbjct: 776 agctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggacccct 717

                                                           
Query: 477 tcattatccgaaggcgcttgcatgactcaacgaacatctcccacggga 524
           |||| ||||  | ||| ||||||||  |||| ||||||||||| ||||
Sbjct: 716 tcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatggga 669
to top
>ref|NM_100306.2| Arabidopsis thaliana AXR3 (AUXIN RESISTANT 3); transcription factor
           AT1G04250 (AXR3) mRNA, complete cds
          Length = 1057

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 426 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 480
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 803 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 749
to top
>gb|AC115751.6| Mus musculus chromosome 1, clone RP23-16I21, complete sequence
          Length = 256998

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 149    agaacaagcagagcaaaaagaaa 171
              |||||||||||||||||||||||
Sbjct: 171203 agaacaagcagagcaaaaagaaa 171181
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>gb|AC138640.7| Mus musculus chromosome 1, clone RP23-463G19, complete sequence
          Length = 167384

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 149  agaacaagcagagcaaaaagaaa 171
            |||||||||||||||||||||||
Sbjct: 4245 agaacaagcagagcaaaaagaaa 4223
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>gb|AF336916.1| Arabidopsis thaliana auxin-induced protein, IAA17/AXR3-1
           (At1g04250) mRNA, complete cds
          Length = 690

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 426 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 480
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 679 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 625
to top
>gb|AY117183.1| Arabidopsis thaliana auxin-induced protein IAA17/AXR3-1 (At1g04250)
           mRNA, complete cds
          Length = 721

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 426 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 480
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 679 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 625
to top
>gb|AY070094.1| Arabidopsis thaliana auxin-induced protein IAA17/AXR3-1 (At1g04250)
           mRNA, complete cds
          Length = 1033

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 426 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 480
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 761 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 707
to top
>emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in linkage group 14,
             complete sequence
          Length = 189425

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 378   attttgattcttgcataacattt 400
             |||||||||||||||||||||||
Sbjct: 13185 attttgattcttgcataacattt 13163
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>dbj|AK221076.1| Arabidopsis thaliana mRNA for putative auxin-induced protein,
           IAA17/AXR3-1, complete cds, clone: RAFL22-79-F09
          Length = 452

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 426 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 480
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 206 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 152
to top
>gb|AY087284.1| Arabidopsis thaliana clone 33613 mRNA, complete sequence
          Length = 1021

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 426 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 480
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 803 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 749
to top
>gb|U49073.1|ATU49073 Arabidopsis thaliana early auxin-induced (IAA17) mRNA, complete cds
          Length = 971

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 426 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 480
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 740 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 686
to top
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1
          Length = 206606

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                          
Query: 453    caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 512
              |||| ||||| ||||| |||||||||||||| || |  || ||||||||||| || ||||
Sbjct: 106636 caagtccaattgcttcggatcctttcattatgcgcaaacgtttgcatgactcgacaaaca 106695

                
Query: 513    tc 514
              ||
Sbjct: 106696 tc 106697
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>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39
          Length = 197976

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 453   caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 512
             |||| ||||| ||||| |||||||||||||| || |  || ||||||||||| || ||||
Sbjct: 52132 caagtccaattgcttcggatcctttcattatgcgcaaacgtttgcatgactcgacaaaca 52191

               
Query: 513   tc 514
             ||
Sbjct: 52192 tc 52193
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>gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, complete sequence
          Length = 191923

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 154   aagcagagcaaaaagaaaagacacaa 179
             |||||||| |||||||||||||||||
Sbjct: 85548 aagcagagaaaaaagaaaagacacaa 85573
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>gb|AF123504.1|AF123504 Nicotiana tabacum Nt-iaa2.3 deduced protein mRNA, complete cds
          Length = 756

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 464 gcttctgatcctttcattatcc 485
           ||||||||||||||||||||||
Sbjct: 564 gcttctgatcctttcattatcc 543
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>ref|NM_123385.2| Arabidopsis thaliana unknown protein AT5G40210 mRNA, complete cds
          Length = 1154

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 214 gttcttggcttcttctttctt 234
           |||||||||||||||||||||
Sbjct: 23  gttcttggcttcttctttctt 3
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>ref|XM_513609.1| PREDICTED: Pan troglodytes similar to syntaxin 4 binding protein
            UNC-18c (LOC457078), mRNA
          Length = 4194

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 149  agaacaagcagagcaaaaaga 169
            |||||||||||||||||||||
Sbjct: 2549 agaacaagcagagcaaaaaga 2569
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>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 162     caaaaagaaaagacacaatta 182
               |||||||||||||||||||||
Sbjct: 1125044 caaaaagaaaagacacaatta 1125064
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>gb|AC091781.20| Trypanosoma brucei chromosome 4 clone RPCI93-30K5, complete sequence
          Length = 144951

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 162   caaaaagaaaagacacaatta 182
             |||||||||||||||||||||
Sbjct: 93845 caaaaagaaaagacacaatta 93865
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>gb|AC159410.1| Trypanosoma brucei chromosome 4 clone RPCI93-1D20, complete sequence
          Length = 154694

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 162   caaaaagaaaagacacaatta 182
             |||||||||||||||||||||
Sbjct: 40947 caaaaagaaaagacacaatta 40927
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>ref|NM_001033838.1| Ciona intestinalis LIM and SH3 protein (lasp), mRNA
          Length = 711

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 agctcctgttcttgcatttct 437
           |||||||||||||||||||||
Sbjct: 672 agctcctgttcttgcatttct 652
to top
>gb|AC125781.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0058G18, complete sequence
          Length = 175397

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 210    acatgttcttggcttcttctt 230
              |||||||||||||||||||||
Sbjct: 105892 acatgttcttggcttcttctt 105912
to top
>gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0014E11, complete sequence
          Length = 199348

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 210   acatgttcttggcttcttctt 230
             |||||||||||||||||||||
Sbjct: 46906 acatgttcttggcttcttctt 46926
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>gb|AC138767.7| Mus musculus chromosome 12, clone RP23-454K24, complete sequence
          Length = 192692

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 329    acttaggacagagaatatgatacag 353
              |||||||||| ||||||||||||||
Sbjct: 167403 acttaggacatagaatatgatacag 167379
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>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA,
           complete cds
          Length = 1228

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 424 gttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 480
           ||||||| |||||||||  ||||| || || || |||||||| || |||||||||||
Sbjct: 909 gttcttggatttctccacagccctgggagctagtccaatagcatcggatcctttcat 853
to top
>gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, complete sequence
          Length = 198687

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 420    tcctgttcttgcatttctcca 440
              |||||||||||||||||||||
Sbjct: 191268 tcctgttcttgcatttctcca 191288
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>gb|AC091879.2| Homo sapiens chromosome 5 clone CTD-3136G21, complete sequence
          Length = 170712

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 420    tcctgttcttgcatttctcca 440
              |||||||||||||||||||||
Sbjct: 168732 tcctgttcttgcatttctcca 168712
to top
>gb|AF412089.1|AF412089 Arabidopsis thaliana AT5g40210/MSN9_110 mRNA, complete cds
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 214 gttcttggcttcttctttctt 234
           |||||||||||||||||||||
Sbjct: 23  gttcttggcttcttctttctt 3
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>gb|AC157515.2| Mus musculus BAC clone RP24-226N22 from chromosome 12, complete
             sequence
          Length = 143190

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 329   acttaggacagagaatatgatacag 353
             |||||||||| ||||||||||||||
Sbjct: 32744 acttaggacatagaatatgatacag 32720
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 210      acatgttcttggcttcttctt 230
                |||||||||||||||||||||
Sbjct: 24917778 acatgttcttggcttcttctt 24917798
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 207     ctcacatgttcttggcttctt 227
               |||||||||||||||||||||
Sbjct: 3804899 ctcacatgttcttggcttctt 3804879
to top
>gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds
          Length = 1481

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 420  tcctgttcttgcatttctcca 440
            |||||||||||||||||||||
Sbjct: 1075 tcctgttcttgcatttctcca 1055
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>dbj|AB182287.1| Ciona intestinalis mRNA for lasp, complete cds
          Length = 711

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 agctcctgttcttgcatttct 437
           |||||||||||||||||||||
Sbjct: 672 agctcctgttcttgcatttct 652
to top
>gb|AC068121.8| Homo sapiens BAC clone RP11-181P21 from 2, complete sequence
          Length = 170846

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 229    tttcttatgtatataacaaga 249
              |||||||||||||||||||||
Sbjct: 119933 tttcttatgtatataacaaga 119953
to top
>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1449_C01
          Length = 192857

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   ctcacatgttcttggcttctt 227
             |||||||||||||||||||||
Sbjct: 70116 ctcacatgttcttggcttctt 70096
to top
>emb|AL672124.13| Mouse DNA sequence from clone RP23-392H8 on chromosome X, complete
              sequence
          Length = 197404

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 262    ctgactgactggaaaagagaa 282
              |||||||||||||||||||||
Sbjct: 146717 ctgactgactggaaaagagaa 146697
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>dbj|AB010699.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN9
          Length = 61001

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 214   gttcttggcttcttctttctt 234
             |||||||||||||||||||||
Sbjct: 28698 gttcttggcttcttctttctt 28718
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>gb|AC105989.14| Mus musculus chromosome 8, clone RP24-95N3, complete sequence
          Length = 194387

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 153    caagcagagcaaaaagaaaagacacaatt 181
              ||||||||||| |||||||||||| ||||
Sbjct: 108849 caagcagagcagaaagaaaagacagaatt 108821
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>emb|AL929326.9| Zebrafish DNA sequence from clone BUSM1-SL11 in linkage group 20,
             complete sequence
          Length = 137700

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 223   ttcttctttcttatgtatata 243
             |||||||||||||||||||||
Sbjct: 18952 ttcttctttcttatgtatata 18932
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 210      acatgttcttggcttcttctt 230
                |||||||||||||||||||||
Sbjct: 25229448 acatgttcttggcttcttctt 25229468
to top
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0069P02 map near S13580, complete sequence
          Length = 88044

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 426  tcttgcatttctccatcgcccttggtgc 453
            |||||||||||||||  |||||||||||
Sbjct: 6366 tcttgcatttctccactgcccttggtgc 6339
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>gb|AC103379.8| Mus musculus chromosome 13, clone RP24-245I24, complete sequence
          Length = 170688

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   aaagagaagatcacaaccca 294
             ||||||||||||||||||||
Sbjct: 31708 aaagagaagatcacaaccca 31727
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 426      tcttgcatttctccatcgcccttggtgc 453
                |||||||||||||||  |||||||||||
Sbjct: 24085090 tcttgcatttctccactgcccttggtgc 24085117
to top
>gb|AC132284.5| Mus musculus BAC clone RP24-351O18 from chromosome 5, complete sequence
          Length = 174681

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    agcaaaaagaaaagacacaa 179
              ||||||||||||||||||||
Sbjct: 160747 agcaaaaagaaaagacacaa 160728
to top
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete
              sequence
          Length = 140980

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 426    tcttgcatttctccatcgcccttggtgc 453
              |||||||||||||||  |||||||||||
Sbjct: 137466 tcttgcatttctccactgcccttggtgc 137439
to top
>emb|CT025566.7| Mouse DNA sequence from clone RP24-151A22 on chromosome 13, complete
             sequence
          Length = 149381

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   aaagagaagatcacaaccca 294
             ||||||||||||||||||||
Sbjct: 87508 aaagagaagatcacaaccca 87527
to top
>gb|AC121947.2| Mus musculus BAC clone RP24-213L3 from 13, complete sequence
          Length = 154202

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   gagcaaaaagaaaagacaca 178
             ||||||||||||||||||||
Sbjct: 98541 gagcaaaaagaaaagacaca 98522
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>ref|XM_652254.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (2.t00121)
           partial mRNA
          Length = 2247

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 459 caatagcttctgatcctttc 478
           ||||||||||||||||||||
Sbjct: 670 caatagcttctgatcctttc 651
to top
>gb|AY337616.1| Gossypium barbadense Gbiaa-Re (iaa-re) mRNA, complete cds
          Length = 1043

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 462 tagcttctgatcctttcattatcc 485
           ||||||||||||||||||| ||||
Sbjct: 610 tagcttctgatcctttcatgatcc 587
to top
>emb|AL513493.11| Human DNA sequence from clone RP11-433N2 on chromosome 1 Contains the
             5' end of the PDE4B gene for phosphodiesterase 4B,
             cAMP-specific (phosphodiesterase E4 dunce homolog,
             Drosophila), complete sequence
          Length = 165780

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   tcctgttcttgcatttctcc 439
             ||||||||||||||||||||
Sbjct: 20832 tcctgttcttgcatttctcc 20851
to top
>emb|AL391994.28| Human DNA sequence from clone RP11-382D8 on chromosome 1 Contains the
             5' end of the ARID4B gene for AT rich interactive domain
             4B (RBP1- like), a ribosomal protein L23a (RPL23A)
             pseudogene, ubiquitin-conjugating enzyme E2G 1 (UBC7
             homolog, C. elegans) (UBE2G10 pseudogene, the GGPS1 gene
             for geranylgeranyl diphosphate synthase 1 and two CpG
             islands, complete sequence
          Length = 142273

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   aagcagagcaaaaagaaaag 173
             ||||||||||||||||||||
Sbjct: 48435 aagcagagcaaaaagaaaag 48416
to top
>emb|AL450346.4| Human DNA sequence from clone RP11-184C23 on chromosome 6 Contains the
              gene for a novel protein similar to FK506-binding protein
              (FKBP-12) (Peptidyl-prolyl cis-trans isomerase)(PPiase)
              (Rotamase), a pseudogene similar to part of serine
              palmitoyltransferase long chain base subunit 1(SPTLC1) and
              a novel pseudogene, complete sequence
          Length = 168467

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 163    aaaaagaaaagacacaattatgtg 186
              ||||||||||||||||| ||||||
Sbjct: 108420 aaaaagaaaagacacaaatatgtg 108443
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>emb|AL357712.10| Human DNA sequence from clone GS1-756B1 on chromosome 10 Contains a
             novel pseudogene (FLJ34719 FLJ14936) and the 3' end of a
             novel gene, complete sequence
          Length = 110645

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   cttagacttaggacagagaa 343
             ||||||||||||||||||||
Sbjct: 88043 cttagacttaggacagagaa 88062
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>emb|AL133380.5| Human DNA sequence from clone RP5-862P8 on chromosome 1q42.2-43
             Contains a ribosomal protein S7 (RPS7) pseudogene, pecanex
             homolog (Drosophila) (PCNX) pseudogene and the gene for
             mixed lineage kinase 4 (KIAA1804), complete sequence
          Length = 118632

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   actgactggaaaagagaaga 284
             ||||||||||||||||||||
Sbjct: 12735 actgactggaaaagagaaga 12716
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>emb|AL049541.24|HSJ991B18 Human DNA sequence from clone RP5-991B18 on chromosome
           20q13.11-13.3 Contains a putative novel gene, ESTs, STSs
           and GSSs, complete sequence
          Length = 129874

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 cagagaatatgatacaggga 356
           ||||||||||||||||||||
Sbjct: 576 cagagaatatgatacaggga 557
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>gb|AC105024.8| Homo sapiens chromosome 17, clone CTD-2132N18, complete sequence
          Length = 147662

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   ggaagaacaagcagagcaaa 165
             ||||||||||||||||||||
Sbjct: 22838 ggaagaacaagcagagcaaa 22857
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>emb|CR926468.3| Mouse DNA sequence from clone RP24-191A5 on chromosome 4, complete
            sequence
          Length = 129452

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 148  aagaacaagcagagcaaaaagaaa 171
            |||||||||||| |||||||||||
Sbjct: 5755 aagaacaagcagggcaaaaagaaa 5732
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>emb|BX510641.9| Zebrafish DNA sequence from clone CH211-106M9 in linkage group 14,
             complete sequence
          Length = 161300

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 163   aaaaagaaaagacacaattatgtggcagacag 194
             |||||||||||||| | || ||||||||||||
Sbjct: 57982 aaaaagaaaagacaaatttttgtggcagacag 58013
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>gb|AC010760.8| Homo sapiens chromosome , clone RP11-2F9, complete sequence
          Length = 179139

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   tcctgttcttgcatttctcc 439
             ||||||||||||||||||||
Sbjct: 91797 tcctgttcttgcatttctcc 91778
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>gb|AC100733.16| Mus musculus chromosome 15, clone RP24-312H21, complete sequence
          Length = 151696

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 148   aagaacaagcagagcaaaaagaaaagacacaa 179
             |||||||||||  |||||||||||| ||||||
Sbjct: 39295 aagaacaagcaaggcaaaaagaaaaaacacaa 39326
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 33       gctgataattaaacaacttttgat 56
                ||||||||||| ||||||||||||
Sbjct: 29231641 gctgataattatacaacttttgat 29231618
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 426      tcttgcatttctccatcgcccttggtgc 453
                |||||||||||||||  |||||||||||
Sbjct: 24002559 tcttgcatttctccactgcccttggtgc 24002586
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>gb|AY254569.1| Gossypium barbadense auxin responsive protein IAA-Re (iaa-Re) mRNA,
           complete cds
          Length = 750

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 462 tagcttctgatcctttcattatcc 485
           ||||||||||||||||||| ||||
Sbjct: 317 tagcttctgatcctttcatgatcc 294
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>gb|AC136355.7| Homo sapiens chromosome 15, clone RP11-54M9, complete sequence
          Length = 65183

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   tcctgttcttgcatttctcc 439
             ||||||||||||||||||||
Sbjct: 18021 tcctgttcttgcatttctcc 18040
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>gb|AC135068.5| Homo sapiens chromosome 15, clone RP11-294C11, complete sequence
          Length = 178845

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   tcctgttcttgcatttctcc 439
             ||||||||||||||||||||
Sbjct: 82053 tcctgttcttgcatttctcc 82072
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>gb|AC134981.6| Homo sapiens chromosome 15, clone RP11-361C13, complete sequence
          Length = 194789

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   tcctgttcttgcatttctcc 439
             ||||||||||||||||||||
Sbjct: 63054 tcctgttcttgcatttctcc 63073
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>gb|AC134980.3| Homo sapiens chromosome 15, clone RP11-69H14, complete sequence
          Length = 151383

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   tcctgttcttgcatttctcc 439
             ||||||||||||||||||||
Sbjct: 36192 tcctgttcttgcatttctcc 36173
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>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1215_E11
          Length = 105301

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 33    gctgataattaaacaacttttgat 56
             ||||||||||| ||||||||||||
Sbjct: 98928 gctgataattatacaacttttgat 98905
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>emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (clone pIAA6)
          Length = 702

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 493 cttgcatgactcaacgaacatctcccacggga 524
           ||||||||||||||  ||||||||||| ||||
Sbjct: 394 cttgcatgactcaataaacatctcccaaggga 363
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>dbj|AK100489.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098D08, full
           insert sequence
          Length = 2790

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 33  gctgataattaaacaacttttgat 56
           ||||||||||| ||||||||||||
Sbjct: 999 gctgataattatacaacttttgat 976
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>dbj|AK069477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019I22, full
           insert sequence
          Length = 3231

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 33  gctgataattaaacaacttttgat 56
           ||||||||||| ||||||||||||
Sbjct: 999 gctgataattatacaacttttgat 976
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>gb|AC171780.2| Homo sapiens chromosome 15, clone RP11-350K22, complete sequence
          Length = 192478

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   tcctgttcttgcatttctcc 439
             ||||||||||||||||||||
Sbjct: 38659 tcctgttcttgcatttctcc 38640
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>gb|AC117708.10| Mus musculus chromosome 7, clone RP23-474J16, complete sequence
          Length = 188333

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    aagcagagcaaaaagaaaag 173
              ||||||||||||||||||||
Sbjct: 142377 aagcagagcaaaaagaaaag 142396
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>gb|AC171558.2| Homo sapiens chromosome 15, clone RP11-983G14, complete sequence
          Length = 201265

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   tcctgttcttgcatttctcc 439
             ||||||||||||||||||||
Sbjct: 67139 tcctgttcttgcatttctcc 67120
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>emb|AL512310.4|CNS07EF1 Human chromosome 14 DNA sequence BAC R-597A11 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185605

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 420  tcctgttcttgcatttctcc 439
            ||||||||||||||||||||
Sbjct: 6170 tcctgttcttgcatttctcc 6151
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>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b,
            complete sequence
          Length = 68747

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 458  ccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaacat 513
            ||||| ||||| || ||||||||||| || || |||||||| || || ||||||||
Sbjct: 4408 ccaattgcttcagaacctttcattatgcggagacgcttgcaagattctacgaacat 4463
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>emb|AL732527.6| Mouse DNA sequence from clone RP23-259B18 on chromosome 4, complete
             sequence
          Length = 145837

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 148   aagaacaagcagagcaaaaagaaa 171
             |||||||||||| |||||||||||
Sbjct: 22479 aagaacaagcagggcaaaaagaaa 22502
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>emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chromosome 2, complete
             sequence
          Length = 193932

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 85    gcctttgcattttgtgccaggaag 108
             ||||||||||||| ||||||||||
Sbjct: 26621 gcctttgcattttatgccaggaag 26598
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>dbj|D86559.1| Glycyrrhiza glabra mRNA for polyketide reductase (GGPKR2), complete
           cds
          Length = 1197

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 361 caagcaaggttataggtattttga 384
           |||||||||||||||| |||||||
Sbjct: 192 caagcaaggttataggcattttga 215


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,336,550
Number of Sequences: 3902068
Number of extensions: 6336550
Number of successful extensions: 121630
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121056
Number of HSP's gapped (non-prelim): 570
length of query: 524
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 501
effective length of database: 17,143,297,704
effective search space: 8588792149704
effective search space used: 8588792149704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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