Clone Name | rbart38h05 |
---|---|
Clone Library Name | barley_pub |
>emb|BX950217.14| Zebrafish DNA sequence from clone DKEY-192L17 in linkage group 4, complete sequence Length = 157921 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 aattttgttgagcagcatccc 82 ||||||||||||||||||||| Sbjct: 17798 aattttgttgagcagcatccc 17818
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tcccaccaattttgttgagc 74 |||||||||||||||||||| Sbjct: 76929 tcccaccaattttgttgagc 76910
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 caacttccaatatatgcata 44 |||||||||||||||||||| Sbjct: 127595 caacttccaatatatgcata 127614
>emb|AL049198.2|HS590K14 Human DNA sequence from clone RP4-590K14 on chromosome 1q25.3-31.2 Contains EST and GSSs, complete sequence Length = 41015 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 caaatgacacttgacactac 188 |||||||||||||||||||| Sbjct: 25621 caaatgacacttgacactac 25602
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tcccaccaattttgttgagc 74 |||||||||||||||||||| Sbjct: 11290571 tcccaccaattttgttgagc 11290552
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 caacttccaatatatgcata 44 |||||||||||||||||||| Sbjct: 19800328 caacttccaatatatgcata 19800347
>gb|AC097472.2| Homo sapiens BAC clone RP11-75M18 from 4, complete sequence Length = 146479 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgttgtgttcaggaagcac 149 |||||||||||||||||||| Sbjct: 4670 acgttgtgttcaggaagcac 4651
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 caacttccaatatatgcata 44 |||||||||||||||||||| Sbjct: 24768 caacttccaatatatgcata 24787
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 caacttccaatatatgcata 44 |||||||||||||||||||| Sbjct: 146014 caacttccaatatatgcata 146033
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tcccaccaattttgttgagc 74 |||||||||||||||||||| Sbjct: 11369760 tcccaccaattttgttgagc 11369741
>gb|AC135859.4| Mus musculus BAC clone RP24-151D9 from 10, complete sequence Length = 182809 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 actacaggtctgcagcacac 203 |||||||||||||||||||| Sbjct: 136534 actacaggtctgcagcacac 136515 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,196,977 Number of Sequences: 3902068 Number of extensions: 2196977 Number of successful extensions: 42865 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 42813 Number of HSP's gapped (non-prelim): 52 length of query: 307 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 285 effective length of database: 17,147,199,772 effective search space: 4886951935020 effective search space used: 4886951935020 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)