ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart38h04 |
|---|---|
| Clone Library Name | barley_pub |
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 53.9 bits (128), Expect = 2e-07 Identities = 22/81 (27%), Positives = 42/81 (51%) Frame = -3 Query: 436 LPGGRFLLANVYDLVMELIANHRKYGFGTASVACCGNGGRYAGIVPCGPTSSMCDDRENH 257 LP F+ ++Y ++ +++ YGF CC G AG + TS +C + ++ Sbjct: 445 LPNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTGLLSAGALCKKSTSKICPNTSSY 504 Query: 256 VFWDPYHPSEKANVLLAKYIV 194 +FWD HP+++A + K ++ Sbjct: 505 LFWDGVHPTQRAYKTINKVLI 525
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 45.8 bits (107), Expect = 5e-05 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 13/90 (14%) Frame = -3 Query: 409 NVYDLVMELIANHRKYGFGTASVACCGNGGRY---AGIVPCGPTSSM----------CDD 269 +VY L EL + + +GF + V+CCG+GG+Y GI CG + CD+ Sbjct: 279 DVYSLKHELFVHAQGHGFKGSLVSCCGHGGKYNYNKGI-GCGMKKIVKGKEVYIGKPCDE 337 Query: 268 RENHVFWDPYHPSEKANVLLAKYIVDGDSK 179 + V WD H ++ AN + I G SK Sbjct: 338 PDKAVVWDGVHFTQAANKFIFDKIAPGLSK 367
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 43.1 bits (100), Expect = 3e-04 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 12/85 (14%) Frame = -3 Query: 436 LPGGRFLLANVYDLVMELIANHRKYGFGTASVACCGNGGRY--AGIVPCGPTSS------ 281 LP F+ ++Y + L + K+GF + CCG GG+Y + PCG T + Sbjct: 272 LPLATFVHVDIYSVKYSLFSEPEKHGFEFPLITCCGYGGKYNFSVTAPCGDTVTADDGTK 331 Query: 280 ----MCDDRENHVFWDPYHPSEKAN 218 C V WD H +E AN Sbjct: 332 IVVGSCACPSVRVNWDGAHYTEAAN 356
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 42.4 bits (98), Expect = 6e-04 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Frame = -3 Query: 436 LPGGRFLLANVYDLVMELIANHRKYGFGTASVACCGNGGRYAGIVPCGPTSSMCDDRENH 257 LP + ++Y + +++ + YGF CC G G+ T + ++ Sbjct: 362 LPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVFCKERTLKNMSNASSY 421 Query: 256 VFWDPYHPSEKA-----NVLLAKYI 197 +FWD HPS++A L+ KYI Sbjct: 422 LFWDGLHPSQRAYEISNRKLVKKYI 446
>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 645 Score = 35.0 bits (79), Expect = 0.088 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Frame = -3 Query: 427 GRFLLANVYDLVMELIANHRKYGF-GTASVACCGNGGRYAGIVPCGPTSSMCDDRENHVF 251 G + +V L+ E+IAN +YGF T AC G AG C + D + +F Sbjct: 270 GNIVRVDVNALLHEVIANPLRYGFLNTIGYACA--QGVNAG--SCRSKDTGFDASKPFLF 325 Query: 250 WDPYHPSEKANVLLAKYIV 194 D +HP+ +A+ ++++Y V Sbjct: 326 ADDFHPTPEAHHIVSQYTV 344
>AMYG_NEUCR (P14804) Glucoamylase precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) Length = 626 Score = 32.0 bits (71), Expect = 0.74 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = -1 Query: 348 PAWRAVATAAGTPGSCRAGRRPACATTGRTTSFGTRITPA 229 P+W A A+A PGSC A T TSF +TPA Sbjct: 470 PSWGA-ASANSLPGSCSASTVAGSYATATATSFPANLTPA 508
>PKNA_MYCTU (P65726) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 32.0 bits (71), Expect = 0.74 Identities = 16/58 (27%), Positives = 22/58 (37%) Frame = -2 Query: 434 AGGQVPAGQRVRPGDGAHRQPQEVRVRDGQRGVLWXXXXXXXXXXXXXXXXXXXRPGE 261 + G+ A +R RP G HR P+ GQR +LW PG+ Sbjct: 309 SAGRTAASRRSRPATGGHRPPRRT-FSSGQRALLWAAGVLGALAIIIAVLLVIKAPGD 365
>PKNA_MYCBO (P65727) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 32.0 bits (71), Expect = 0.74 Identities = 16/58 (27%), Positives = 22/58 (37%) Frame = -2 Query: 434 AGGQVPAGQRVRPGDGAHRQPQEVRVRDGQRGVLWXXXXXXXXXXXXXXXXXXXRPGE 261 + G+ A +R RP G HR P+ GQR +LW PG+ Sbjct: 309 SAGRTAASRRSRPATGGHRPPRRT-FSSGQRALLWAAGVLGALAIIIAVLLVIKAPGD 365
>TF7L1_HUMAN (Q9HCS4) Transcription factor 7-like 1 (HMG box transcription| factor 3) (TCF-3) Length = 588 Score = 31.6 bits (70), Expect = 0.97 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 5/99 (5%) Frame = +3 Query: 162 FMGDMYLLSP--STMYLASSTLAFSLG*YGSQKTWFSRSSHMLDVGPHGTIPAYLPPLPQ 335 + G +L+ P S+ YL++ L+ G +T+ +LDV T+ P P Sbjct: 119 YPGYPFLMIPDLSSPYLSNGPLS-----PGGARTYLQMKWPLLDVPSSATVKDTRSPSPA 173 Query: 336 HATLAVP---NPYFLWLAMSSITRSYTLASRNLPPGSPP 443 H + VP +P+ M +T T ++ + PGSPP Sbjct: 174 HLSNKVPVVQHPHH----MHPLTPLITYSNDHFSPGSPP 208
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 26.9 bits (58), Expect(2) = 3.6 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +1 Query: 388 PSPGRTRWPAGTCPPAARRR 447 PSP R PAG PPAA+ R Sbjct: 108 PSPRRPLVPAGPAPPAAKLR 127 Score = 21.2 bits (43), Expect(2) = 3.6 Identities = 11/27 (40%), Positives = 11/27 (40%) Frame = +2 Query: 281 AGRRPARHDPGVPAAVATARHAGRPEP 361 AG PA G P A AGR P Sbjct: 71 AGAGPAAPAEGAPGAAPEPPPAGRARP 97
>HGLB_SCHJA (P42665) Hemoglobinase precursor (EC 3.4.22.34) (Antigen Sj32)| Length = 423 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 6/89 (6%) Frame = -3 Query: 391 MELIANHRKYGFGTASVACCGNGGRYAGIVPC-----GPTSSMCDDRENHVFW-DPYHPS 230 ++ + HR+Y V C +G +AG++P T++ D+ F DP S Sbjct: 167 LKYLRQHRRYSKLVIYVEACESGSMFAGLLPTDINIYATTAARPDESSYATFCDDPRISS 226 Query: 229 EKANVLLAKYIVDGDSKYISPMNLRKLFK 143 A++ +IVD + ++ L + +K Sbjct: 227 CLADLYSYDWIVDSEKHQLTQRTLDQQYK 255
>VID21_ASPFU (Q4WP03) Chromatin modification-related protein vid21| Length = 1467 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +3 Query: 249 QKTWFSRSSHMLDVGPHGTIPAYLPPLPQHATLAVPNPYFLWLAMSSITRSYTLASRNLP 428 Q+ + +S + V T PA LPQ A+ AVP+ + S+ S + A + LP Sbjct: 152 QQPALATTSEIPQVANSPTTPAQPDQLPQKASFAVPDTPPTSTSHESVDASVSPALKGLP 211 Query: 429 PG--SPP 443 P +PP Sbjct: 212 PSEVAPP 218
>UBXD7_PONPY (Q5REY7) UBX domain-containing protein 7| Length = 489 Score = 29.6 bits (65), Expect = 3.7 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -3 Query: 268 RENHVFWDPYHPSEKANVLLAKYIVDGDSKYISPMNLRKLFKL 140 RE+ +FW YH SE+ + Y + GD Y+S ++ R KL Sbjct: 198 REHFIFWQVYHDSEEGQRYIQFYKL-GDFPYVSILDPRTGQKL 239
>UBXD7_HUMAN (O94888) UBX domain-containing protein 7| Length = 489 Score = 29.6 bits (65), Expect = 3.7 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -3 Query: 268 RENHVFWDPYHPSEKANVLLAKYIVDGDSKYISPMNLRKLFKL 140 RE+ +FW YH SE+ + Y + GD Y+S ++ R KL Sbjct: 198 REHFIFWQVYHDSEEGQRYIQFYKL-GDFPYVSILDPRTGQKL 239
>OLIG2_MOUSE (Q9EQW6) Oligodendrocyte transcription factor 2 (Oligo2)| Length = 323 Score = 29.6 bits (65), Expect = 3.7 Identities = 28/104 (26%), Positives = 36/104 (34%), Gaps = 8/104 (7%) Frame = +2 Query: 59 RLYMPKLHEPRATKKGKMSPAIXXXXXXXXXXXXVHGRYVLAVAVDDVLGEQHVGL---- 226 R MP H P K K++ + + L V ++ G H G Sbjct: 132 REVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRL---VSEIYGGHHAGFHPSA 188 Query: 227 ---LAGVIRVPKDVVLPVVA-HAGRRPARHDPGVPAAVATARHA 346 LA +P P A HA PA H P +P A A A A Sbjct: 189 CGGLAHSAPLPTATAHPAAAAHAAHHPAVHHPILPPAAAAAAAA 232
>OLIG2_HUMAN (Q13516) Oligodendrocyte transcription factor 2 (Oligo2) (Basic| helix-loop-helix protein class B 1) (Protein kinase C-binding protein RACK17) (Protein kinase C-binding protein 2) Length = 323 Score = 29.6 bits (65), Expect = 3.7 Identities = 28/104 (26%), Positives = 36/104 (34%), Gaps = 8/104 (7%) Frame = +2 Query: 59 RLYMPKLHEPRATKKGKMSPAIXXXXXXXXXXXXVHGRYVLAVAVDDVLGEQHVGL---- 226 R MP H P K K++ + + L V ++ G H G Sbjct: 132 REVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRL---VSEIYGGHHAGFHPSA 188 Query: 227 ---LAGVIRVPKDVVLPVVA-HAGRRPARHDPGVPAAVATARHA 346 LA +P P A HA PA H P +P A A A A Sbjct: 189 CGGLAHSAPLPAATAHPAAAAHAAHHPAVHHPILPPAAAAAAAA 232
>UBXD7_MOUSE (Q6P5G6) UBX domain-containing protein 7| Length = 467 Score = 29.6 bits (65), Expect = 3.7 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = -3 Query: 268 RENHVFWDPYHPSEKANVLLAKYIVDGDSKYISPMNLRKLFKL 140 RE+ +FW YH SE+ + Y + GD Y+S ++ R KL Sbjct: 176 REHFIFWQVYHDSEEGQRYIQFYKL-GDFPYVSILDPRTGQKL 217
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)| (L(1)omb) (Protein bifid) Length = 972 Score = 29.6 bits (65), Expect = 3.7 Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 3/58 (5%) Frame = +2 Query: 275 AHAGRRP--ARHDPGVPAAVATARHAGRPEPVLPVVGDELHH-QVVHVGQQEPAPRQP 439 AH P A H P AA A G P P P HH Q QQ PAP P Sbjct: 192 AHPSHHPTAAHHSPSTGAAAPPAGPTGLPPPTPP------HHLQQQQQQQQHPAPPPP 243
>TF7L1_MOUSE (Q9Z1J1) Transcription factor 7-like 1 (HMG box transcription| factor 3) (TCF-3) (mTCF-3) Length = 584 Score = 29.3 bits (64), Expect = 4.8 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 5/99 (5%) Frame = +3 Query: 162 FMGDMYLLSP--STMYLASSTLAFSLG*YGSQKTWFSRSSHMLDVGPHGTIPAYLPPLPQ 335 + G +L+ P S+ YL++ L+ G +T+ +LDV T+ P P Sbjct: 116 YPGYPFLMIPDLSSPYLSNGPLS-----PGGARTYLQMKWPLLDVPSSATVKDTRSPSPA 170 Query: 336 HATLAVP---NPYFLWLAMSSITRSYTLASRNLPPGSPP 443 H + VP +P+ M +T T ++ + P SPP Sbjct: 171 HLSNKVPVVQHPHH----MHPLTPLITYSNDHFSPASPP 205
>FHAB_BORPE (P12255) Filamentous hemagglutinin| Length = 3590 Score = 29.3 bits (64), Expect = 4.8 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Frame = +2 Query: 281 AGRRPAR-HDPGV--PAAVATARHAGRPEPVLPVVGDELHHQVVHVGQQEP 424 +GRR A+ D G+ P+AVA V PV GD++ VV VG ++P Sbjct: 2296 SGRRNAQVADAGLAGPSAVAAPAVGAADVGVEPVTGDQVDQPVVAVGLEQP 2346
>FA20A_HUMAN (Q96MK3) Protein FAM20A precursor| Length = 541 Score = 29.3 bits (64), Expect = 4.8 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Frame = +3 Query: 294 PH---GTIPAYLPPLPQHATLAVPNPYFLWLAMSSITRSYTLASR 419 PH G++ A+LP L L+VPNP+ RSYTLA + Sbjct: 333 PHLLEGSLSAFLPSLNLAPRLSVPNPWI---------RSYTLAGK 368
>NGAP_HUMAN (Q9UJF2) Ras GTPase-activating protein nGAP (RAS protein| activator-like 1) Length = 1139 Score = 29.3 bits (64), Expect = 4.8 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 7/62 (11%) Frame = +3 Query: 18 CAIVHIVHTSNMSPDYTCPNFTNRAQPKRERC-------HRRSNLSV*SLKSFLRFMGDM 176 CA+VHI+ ++ + D+ T+ + +RC R + ++ S++ +L+ +G Sbjct: 333 CALVHILQSTGRAKDF----LTDLVMSEVDRCGEHDVLIFRENTIATKSIEEYLKLVGQQ 388 Query: 177 YL 182 YL Sbjct: 389 YL 390
>NU5M_CHICK (P18940) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH| dehydrogenase subunit 5) Length = 605 Score = 29.3 bits (64), Expect = 4.8 Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 1/138 (0%) Frame = +3 Query: 33 IVHTSNMSPDYTCPNFTNRAQPKRERCHRRSNLSV*SLKSFLRFMG-DMYLLSPSTMYLA 209 I+H+ N D + P C NL++ F D+ + + +T Y+ Sbjct: 346 IIHSLNGEQDIRKMGCLQKTLPMTTSCLTIGNLALMGTPFLAGFYSKDLIIENLNTSYIN 405 Query: 210 SSTLAFSLG*YGSQKTWFSRSSHMLDVGPHGTIPAYLPPLPQHATLAVPNPYFLWLAMSS 389 + L+ +L T+ R + ++ G H P+ P +P + LA+ S Sbjct: 406 TWALSLTLLATSFTATYSLRMTLLVQTG-HTRTPSNHPINENTPPAILP---IMRLALGS 461 Query: 390 ITRSYTLASRNLPPGSPP 443 I ++S LPP +PP Sbjct: 462 IMAGLLISSLILPPKTPP 479
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = -1 Query: 336 AVATAAGTPGSCRAGRRPACATTGRT----TSFGTRITP 232 +VAT + TPG+ + P TTG T +S GT +TP Sbjct: 4518 SVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTP 4556 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = -1 Query: 336 AVATAAGTPGSCRAGRRPACATTGRT----TSFGTRITP 232 +VAT + TPG+ + P TTG T +S GT +TP Sbjct: 3262 SVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTP 3300 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = -1 Query: 336 AVATAAGTPGSCRAGRRPACATTGRT----TSFGTRITP 232 +VAT + TPG+ + P TTG T +S GT +TP Sbjct: 2564 SVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTP 2602
>NADE_TREPA (O83759) Probable glutamine-dependent NAD(+) synthetase (EC| 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing]) Length = 679 Score = 28.9 bits (63), Expect = 6.3 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 7/85 (8%) Frame = +2 Query: 197 DVLGEQHVGLLAGVIRVPKDVVLPVVAHAGRRPAR-----HDPGVPAAVATARHAGR--P 355 + G H+ L A +PK VV ++++AGR P R P P A +R Sbjct: 497 ETFGGDHLSLYAVNASLPKTVVRALISYAGRVPERFVCETDSPYAPRGAAFSRVCAAIVA 556 Query: 356 EPVLPVVGDELHHQVVHVGQQEPAP 430 +PV P + ++V ++ P Sbjct: 557 QPVSPELIPPCDDRIVQCTEEMLGP 581
>BRAP_HUMAN (Q7Z569) BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes| mitogenic signal propagation) (IMP) (RING finger protein 52) (NY-REN-63 antigen) Length = 592 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -2 Query: 77 VWACIIWGHI*CMNYVHDRAY 15 +W C+I GHI C YV AY Sbjct: 326 LWICLICGHIGCGRYVSRHAY 346
>BRAP_MOUSE (Q99MP8) BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes| mitogenic signal propagation) (IMP) Length = 591 Score = 28.9 bits (63), Expect = 6.3 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -2 Query: 77 VWACIIWGHI*CMNYVHDRAY 15 +W C+I GHI C YV AY Sbjct: 325 LWICLICGHIGCGRYVSRHAY 345
>NU5M_PETMA (Q35543) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH| dehydrogenase subunit 5) Length = 598 Score = 28.5 bits (62), Expect = 8.2 Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 1/137 (0%) Frame = +3 Query: 33 IVHTSNMSPDYTCPNFTNRAQPKRERCHRRSNLSV*SLKSFLRFMG-DMYLLSPSTMYLA 209 I+H N D + N P C + ++ L F D+ L + +T Y Sbjct: 346 IIHNMNNEQDIRKFSCLNNNLPLTTTCMTIGSAALMGLPFLAGFFTKDLILEALNTSYTN 405 Query: 210 SSTLAFSLG*YGSQKTWFSRSSHMLDVGPHGTIPAYLPPLPQHATLAVPNPYFLWLAMSS 389 + L +L + + SS ++ + GT P YLP P H + NP LA S Sbjct: 406 AWALMVTLM---AVTLTTAYSSRLIIMSASGT-PRYLPLTPTHENNFIKNP-LKRLAWGS 460 Query: 390 ITRSYTLASRNLPPGSP 440 + L S LPP P Sbjct: 461 LISGLILTS-TLPPMKP 476
>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 Length = 819 Score = 28.5 bits (62), Expect = 8.2 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -2 Query: 269 PGEPRLLGPVSPQREG 222 PG PR++GP PQR+G Sbjct: 673 PGGPRMMGPPPPQRDG 688
>POL2_ARMVS (Q65030) RNA2 polyprotein (P2) [Contains: P2A protein (2A); Movement| protein (2B-MP); Coat protein (2C-CP)] Length = 1131 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = +3 Query: 327 LPQHATLAVPNPYFLWLAMSSIT---RSYTLASR 419 LP + + PN YFLW+ SS T Y + SR Sbjct: 962 LPDLSVPSFPNDYFLWVDFSSFTVDVEEYVIGSR 995
>POL2_ARMV (P24819) RNA2 polyprotein (P2) [Contains: Movement protein (2B-MP);| Coat protein (2C-CP)] (Fragment) Length = 506 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = +3 Query: 327 LPQHATLAVPNPYFLWLAMSSIT---RSYTLASR 419 LP + + PN YFLW+ SS T Y + SR Sbjct: 337 LPDLSVPSFPNDYFLWVDFSSFTVDVEEYVIGSR 370
>ATG4_CRYNE (Q5K9L9) Cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related| protein 4) Length = 1193 Score = 28.5 bits (62), Expect = 8.2 Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 6/105 (5%) Frame = +3 Query: 45 SNMSPDYTCPNFTNRA--QPKRERCHRRSNLSV*SLKSFLRFMGDMYLLSPSTMYLASST 218 +++SP + R + K E+ +R+ L + ++ L + +Y S ++ + Sbjct: 704 NSISPTFNSSKKKRRGDNEAKEEKWGKRAVLILVGVRLGLDGVNPIYYDSIKALFTFPQS 763 Query: 219 LAFSLG*YGSQKTWF-SRSSHMLDVGPHGT---IPAYLPPLPQHA 341 + + G S + S+++H+ + PH T IP +PPLP H+ Sbjct: 764 VGIAGGRPSSSYYFVGSQANHLFYLDPHLTRPAIPLQIPPLPVHS 808
>NHRF2_RAT (Q920G2) Na(+)/H(+) exchange regulatory cofactor NHE-RF2 (NHERF-2)| (Tyrosine kinase activator protein 1) (TKA-1) (SRY-interacting protein 1) (SIP-1) (Solute carrier family 9 isoform A3 regulatory factor 2) (NHE3 kinase A regulatory protein E3KA Length = 337 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = +2 Query: 299 RHDPGVPAAVATARHAGRPEPVLPV-VGDELHHQVVH 406 R +PG PA A R R V V V E HHQVVH Sbjct: 38 RVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVH 74
>BARH2_RAT (O88181) BarH-like 2 homeobox protein (Bar-class homeodomain| protein MBH1) (Homeobox protein B-H1) Length = 384 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +2 Query: 353 PEPVLPVVGDELHHQVVHVGQQEPAPRQP 439 PEP L G + HH +H GQQ P P P Sbjct: 74 PEPHLVTDGPQHHHH-LHHGQQPPPPSAP 101
>NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 precursor (Notch| 4) (hNotch4) [Contains: Notch 4 extracellular truncation; Notch 4 intracellular domain] Length = 2003 Score = 28.5 bits (62), Expect = 8.2 Identities = 14/47 (29%), Positives = 19/47 (40%) Frame = -3 Query: 340 ACCGNGGRYAGIVPCGPTSSMCDDRENHVFWDPYHPSEKANVLLAKY 200 +C G + + P G T S C+ N P HP LLA + Sbjct: 451 SCLNTPGSFNCLCPPGYTGSRCEADHNECLSQPCHPGSTCLDLLATF 497
>SALL3_HUMAN (Q9BXA9) Sal-like protein 3 (Zinc finger protein SALL3) (hSALL3)| Length = 1300 Score = 28.5 bits (62), Expect = 8.2 Identities = 22/72 (30%), Positives = 25/72 (34%) Frame = +2 Query: 227 LAGVIRVPKDVVLPVVAHAGRRPARHDPGVPAAVATARHAGRPEPVLPVVGDELHHQVVH 406 L G+ +P P A AG PA PAA A+ RPE G Sbjct: 258 LPGLAALPLSAGAPAAAIAGSGPA-----APAAFEGAQPLSRPESGASTPGGPAEPSAPA 312 Query: 407 VGQQEPAPRQPA 442 PAP PA Sbjct: 313 APSAAPAPAAPA 324 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,907,506 Number of Sequences: 219361 Number of extensions: 1520072 Number of successful extensions: 5329 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 5047 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5322 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
