>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                           
Query: 218     ttcatgggtcgaggttgacgggcagcaccgtgctccgcgagctccggccgagcccgaacg 277
               ||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2758535 ttcatgggtcgaggtggatgggcaacaccgtgctccgcgagctccggccgagcccgaacg 2758594

                                                             
Query: 278     acgacataagccgccgcaaccgcccgctcgtctcgccgacgccggc 323
               ||||||  | |||||| ||||| ||||| ||||||||| |||||||
Sbjct: 2758595 acgacagcaaccgccgaaaccggccgctggtctcgccggcgccggc 2758640

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                           
Query: 218     ttcatgggtcgaggttgacgggcagcaccgtgctccgcgagctccggccgagcccgaacg 277
               ||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2758645 ttcatgggtcgaggtggatgggcaacaccgtgctccgcgagctccggccgagcccgaacg 2758704

                                                             
Query: 278     acgacataagccgccgcaaccgcccgctcgtctcgccgacgccggc 323
               ||||||  | |||||| ||||| ||||| ||||||||| |||||||
Sbjct: 2758705 acgacagcaaccgccgaaaccggccgctggtctcgccggcgccggc 2758750

>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0038D20, from chromosome 3, complete sequence
          Length = 165395

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                         
Query: 218   ttcatgggtcgaggttgacgggcagcaccgtgctccgcgagctccggccgagcccgaacg 277
             ||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 30491 ttcatgggtcgaggtggatgggcaacaccgtgctccgcgagctccggccgagcccgaacg 30550

                                                           
Query: 278   acgacataagccgccgcaaccgcccgctcgtctcgccgacgccggc 323
             ||||||  | |||||| ||||| ||||| ||||||||| |||||||
Sbjct: 30551 acgacagcaaccgccgaaaccggccgctggtctcgccggcgccggc 30596

>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02,
              complete sequence
          Length = 133373

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                          
Query: 218    ttcatgggtcgaggttgacgggcagcaccgtgctccgcgagctccggccgagcccgaacg 277
              ||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 103454 ttcatgggtcgaggtggatgggcaacaccgtgctccgcgagctccggccgagcccgaacg 103513

                                                            
Query: 278    acgacataagccgccgcaaccgcccgctcgtctcgccgacgccggc 323
              ||||||  | |||||| ||||| ||||| ||||||||| |||||||
Sbjct: 103514 acgacagcaaccgccgaaaccggccgctggtctcgccggcgccggc 103559

>dbj|AK109394.3| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E06, full
           insert sequence
          Length = 1144

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                       
Query: 218 ttcatgggtcgaggttgacgggcagcaccgtgctccgcgagctccggccgagcccgaacg 277
           ||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 912 ttcatgggtcgaggtggatgggcaacaccgtgctccgcgagctccggccgagcccgaacg 853

                                                         
Query: 278 acgacataagccgccgcaaccgcccgctcgtctcgccgacgccggc 323
           ||||||  | |||||| ||||| ||||| ||||||||| |||||||
Sbjct: 852 acgacagcaaccgccgaaaccggccgctggtctcgccggcgccggc 807

>ref|XM_470240.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 873

 Score =  129 bits (65), Expect = 9e-27
 Identities = 95/105 (90%)
 Strand = Plus / Minus

                                                                       
Query: 219 tcatgggtcgaggttgacgggcagcaccgtgctccgcgagctccggccgagcccgaacga 278
           |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 873 tcatgggtcgaggtggatgggcaacaccgtgctccgcgagctccggccgagcccgaacga 814

                                                        
Query: 279 cgacataagccgccgcaaccgcccgctcgtctcgccgacgccggc 323
           |||||  | |||||| ||||| ||||| ||||||||| |||||||
Sbjct: 813 cgacagcaaccgccgaaaccggccgctggtctcgccggcgccggc 769

>gb|AC079446.30| Mus musculus strain C57BL/6J chromosome X clone rp23-9p22, complete
              sequence
          Length = 223309

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 140    ggggagtttaatcaacaacaaaag 163
              ||||||||||||||||||||||||
Sbjct: 181673 ggggagtttaatcaacaacaaaag 181696

>emb|AL672268.18| Mouse DNA sequence from clone RP23-171J18 on chromosome X, complete
             sequence
          Length = 187999

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 140   ggggagtttaatcaacaacaaaag 163
             ||||||||||||||||||||||||
Sbjct: 55958 ggggagtttaatcaacaacaaaag 55981

>ref|XM_952077.1| Neurospora crassa OR74A related to multifunctional cyclin-dependent
            kinase PHO85 [MIPS] (NCU01747.1) partial mRNA
          Length = 3738

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 408  gaagtccatggacatggagcgc 429
            ||||||||||||||||||||||
Sbjct: 2853 gaagtccatggacatggagcgc 2832

>ref|XM_328185.1| Neurospora crassa OR74A related to multifunctional cyclin-dependent
            kinase PHO85 [MIPS] (NCU01747.1) partial mRNA
          Length = 3738

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 408  gaagtccatggacatggagcgc 429
            ||||||||||||||||||||||
Sbjct: 2853 gaagtccatggacatggagcgc 2832

>emb|AL356815.1|NCB24H17 Neurospora crassa DNA linkage group II BAC clone B24H17
          Length = 82972

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 408  gaagtccatggacatggagcgc 429
            ||||||||||||||||||||||
Sbjct: 3968 gaagtccatggacatggagcgc 3989

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 93      agtaatccatccatgcaccctcctct 118
               |||||||||||||||||||| |||||
Sbjct: 1138054 agtaatccatccatgcacccacctct 1138079

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 93      agtaatccatccatgcaccctcctct 118
               |||||||||||||||||||| |||||
Sbjct: 1138054 agtaatccatccatgcacccacctct 1138079

>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 126974

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 93    agtaatccatccatgcaccctcctct 118
             |||||||||||||||||||| |||||
Sbjct: 77037 agtaatccatccatgcacccacctct 77062

>ref|XM_801605.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
           (DGF-1) (Tc00.1047053504169.10) partial mRNA
          Length = 7458

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 150 atcaacaacaaaagcatcgat 170
           |||||||||||||||||||||
Sbjct: 54  atcaacaacaaaagcatcgat 34

>ref|XM_807019.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053503909.19) partial mRNA
          Length = 3795

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 150  atcaacaacaaaagcatcgat 170
            |||||||||||||||||||||
Sbjct: 2997 atcaacaacaaaagcatcgat 2977

>gb|DQ399653.1| Nonomuraea longicatena K-252a biosynthesis gene cluster, complete
            sequence
          Length = 20300

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 297  ccgcccgctcgtctcgccgacgccggccg 325
            ||||||||||||||||| | |||||||||
Sbjct: 3571 ccgcccgctcgtctcgctggcgccggccg 3543

>gb|AY225511.1| Streptomyces lividans strain 1326 plasmid SLP2, complete sequence
          Length = 50410

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 441  ctgcacggcgatgccctgct 460
            ||||||||||||||||||||
Sbjct: 5059 ctgcacggcgatgccctgct 5078

>gb|AY658212.1| Synthetic construct Peudomonas aeruginosa clone FLH052792.01F
           PA0075 gene, partial cds
          Length = 729

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 353 cagccacgtcggcatggtcc 372
           ||||||||||||||||||||
Sbjct: 42  cagccacgtcggcatggtcc 61

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 431     tgatgggctcctgcacggcg 450
               ||||||||||||||||||||
Sbjct: 4376175 tgatgggctcctgcacggcg 4376156



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 399     gcccggcaagaagtccatgg 418
               ||||||||||||||||||||
Sbjct: 3256291 gcccggcaagaagtccatgg 3256310

>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18,
              complete sequence
          Length = 150279

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     agtaatccatccatgcaccc 112
              ||||||||||||||||||||
Sbjct: 130909 agtaatccatccatgcaccc 130928

>emb|AL137061.12| Human DNA sequence from clone RP11-477B16 on chromosome 13 Contains the
              SOX21 gene for SRY (sex determining region Y)-box 21, a
              bromodomain containing 7 (BP75, NAG4, CELTIX1) (BRD7)
              pseudogene, a ribosomal protein L21 (RPL21) pseudogene and
              2 CpG islands, complete sequence
          Length = 180538

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    ccatgatggattcatgggtc 227
              ||||||||||||||||||||
Sbjct: 117491 ccatgatggattcatgggtc 117510

>gb|DQ410885.1| Streptomyces lividans plasmid SLP2, partial sequence
          Length = 22816

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   ctgcacggcgatgccctgct 460
             ||||||||||||||||||||
Sbjct: 20617 ctgcacggcgatgccctgct 20598

>gb|AC018695.6| Homo sapiens BAC clone RP11-568J23 from 16, complete sequence
          Length = 211001

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   cgccggccggggtggctgcc 336
             ||||||||||||||||||||
Sbjct: 34608 cgccggccggggtggctgcc 34589

>gb|AC009068.10|AC009068 Homo sapiens chromosome 16 clone RP11-314K3, complete sequence
          Length = 160356

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   cgccggccggggtggctgcc 336
             ||||||||||||||||||||
Sbjct: 96448 cgccggccggggtggctgcc 96429

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 93      agtaatccatccatgcaccc 112
               ||||||||||||||||||||
Sbjct: 1235103 agtaatccatccatgcaccc 1235122

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 246      cgtgctccgcgagctccggc 265
                ||||||||||||||||||||
Sbjct: 23059378 cgtgctccgcgagctccggc 23059359

>gb|AC123908.3| Homo sapiens chromosome 16 clone CTD-2542L18, complete sequence
          Length = 185321

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    cgccggccggggtggctgcc 336
              ||||||||||||||||||||
Sbjct: 141607 cgccggccggggtggctgcc 141588

>gb|AC021203.5| Homo sapiens BAC clone RP11-143E9 from 4, complete sequence
          Length = 142218

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   ttaatcaacaacaaaagcat 166
             ||||||||||||||||||||
Sbjct: 91393 ttaatcaacaacaaaagcat 91374

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 311     cgccgacgccggccggggtg 330
               ||||||||||||||||||||
Sbjct: 6380109 cgccgacgccggccggggtg 6380090

>gb|AE004446.1| Pseudomonas aeruginosa PAO1, section 7 of 529 of the complete genome
          Length = 19762

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   cagccacgtcggcatggtcc 372
             ||||||||||||||||||||
Sbjct: 15589 cagccacgtcggcatggtcc 15570

>ref|XM_231135.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
            (LOC311858), mRNA
          Length = 10317

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  gctgctggtgccagccacgt 361
            ||||||||||||||||||||
Sbjct: 2886 gctgctggtgccagccacgt 2867

>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1121_A05
          Length = 172668

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    cgtgctccgcgagctccggc 265
              ||||||||||||||||||||
Sbjct: 134592 cgtgctccgcgagctccggc 134573

>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1699_E05
          Length = 170666

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 246  cgtgctccgcgagctccggc 265
            ||||||||||||||||||||
Sbjct: 3562 cgtgctccgcgagctccggc 3543

>dbj|AK108612.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-A11, full
           insert sequence
          Length = 1582

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 cgtgctccgcgagctccggc 265
           ||||||||||||||||||||
Sbjct: 636 cgtgctccgcgagctccggc 617

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 93      agtaatccatccatgcaccc 112
               ||||||||||||||||||||
Sbjct: 1232824 agtaatccatccatgcaccc 1232843

>emb|AL589652.13| Mouse DNA sequence from clone RP23-369L6 on chromosome X, complete
              sequence
          Length = 199294

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    gagtttaatcaacaacaaaa 162
              ||||||||||||||||||||
Sbjct: 146991 gagtttaatcaacaacaaaa 147010


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,480,720
Number of Sequences: 3902068
Number of extensions: 3480720
Number of successful extensions: 71557
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71041
Number of HSP's gapped (non-prelim): 516
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)