ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart38g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463996.1| Oryza sativa (japonica cultivar-group), mRNA 105 1e-19
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
3dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
4dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
5dbj|AK106802.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
6gb|BT017002.1| Zea mays clone EK07D2309H12.c mRNA sequence 98 3e-17
7ref|XM_506449.1| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.007
8ref|XM_479039.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
10dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
11dbj|AK105814.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
12dbj|AK062681.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
13gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.028
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
15gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.43
16gb|AC073363.10| Homo sapiens 3 BAC RP11-293N1 (Roswell Park Canc... 44 0.43
17emb|AL356578.22| Human DNA sequence from clone RP11-14G9 on chro... 44 0.43
18emb|CR354427.7| Zebrafish DNA sequence from clone DKEY-263N17 in... 44 0.43
19dbj|AK106049.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
20dbj|AK105858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
21dbj|AK071271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
22emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in... 44 0.43
23ref|XM_530834.1| PREDICTED: Pan troglodytes LOC462073 (LOC462073... 42 1.7
24gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.7
25gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.7
26gb|AY513239.1| Homo sapiens complement component 3 (C3) gene, co... 42 1.7
27emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.7
28emb|CR610821.1| full-length cDNA clone CS0DK006YC23 of HeLa cell... 42 1.7
29emb|CR601326.1| full-length cDNA clone CS0DL007YK22 of B cells (... 42 1.7
30gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 1.7
31gb|AC008406.7| Homo sapiens chromosome 5 clone CTC-276P9, comple... 42 1.7
32gb|AC008760.7| Homo sapiens chromosome 19 clone CTD-3128G10, com... 42 1.7
33dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.7
34dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.7
35gb|AF116428.1|REMB047R2 Rhizobium etli mutant MB047 RosR-transcr... 42 1.7
36gb|BC009412.1| Homo sapiens paired-like homeodomain transcriptio... 42 1.7
37ref|NM_002653.3| Homo sapiens paired-like homeodomain transcript... 42 1.7
38emb|BX469914.4| Mouse DNA sequence from clone RP23-217J7 on chro... 42 1.7
39emb|CT010517.11| Mouse DNA sequence from clone RP23-357P12 on ch... 42 1.7
40gb|AC164612.4| Mus musculus BAC clone RP23-361B11 from chromosom... 42 1.7
41gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725... 40 6.7
42gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.7
43ref|XM_960514.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.7
44ref|XM_330112.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.7
45gb|AC102420.10| Mus musculus chromosome 8, clone RP24-553O21, co... 40 6.7
46gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 6.7
47ref|XM_972766.1| PREDICTED: Mus musculus protocadherin beta 6 (P... 40 6.7
48gb|BT011462.1| Drosophila melanogaster RE29555 full insert cDNA 40 6.7
49ref|XM_756076.1| Ustilago maydis 521 hypothetical protein (UM050... 40 6.7
50emb|CR392012.7| Zebrafish DNA sequence from clone CH211-253D24 i... 40 6.7
51emb|BX957288.10| Zebrafish DNA sequence from clone DKEY-146P4 in... 40 6.7
52emb|AJ781178.1| Influenza B virus (B/Barcelona/215/03) partial P... 40 6.7
53gb|AC146561.22| Medicago truncatula clone mth2-12j18, complete s... 40 6.7
54gb|AF501263.1| Erwinia chrysanthemi phospholipase C (plcA) gene,... 40 6.7
55gb|CP000088.1| Thermobifida fusca YX, complete genome 40 6.7
56emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 40 6.7
57emb|AL606508.12| Mouse DNA sequence from clone RP23-180B9 on chr... 40 6.7
58ref|NM_143048.1| Drosophila melanogaster CG11089-RA (CG11089), mRNA 40 6.7
59gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.7
60gb|AC171015.5| Gallus gallus BAC clone CH261-18L11 from chromoso... 40 6.7
61gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.7
62gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.7
63gb|AY013788.1| Mus musculus protocadherin beta 6 mRNA, complete cds 40 6.7
64dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
65dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
66dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
67gb|AC008205.7|AC008205 Drosophila melanogaster, chromosome 3R, r... 40 6.7
68gb|AC023050.36| Homo sapiens 12 BAC RP11-428G5 (Roswell Park Can... 40 6.7
69gb|AF296835.1|T8M17 Arabidopsis thaliana BAC T8M17 40 6.7
70gb|AC020974.4|AC020974 Mus musculus chromosome 18 clone RP23-92D... 40 6.7
71dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
72dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
73emb|BX649277.5| Zebrafish DNA sequence from clone DKEYP-67A10 in... 40 6.7
74dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
75ref|NM_208031.1| Eremothecium gossypii AAR136Wp (AAR136W), mRNA 40 6.7
76gb|AE003749.3| Drosophila melanogaster chromosome 3R, section 87... 40 6.7
77gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.7
78gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.7
79gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.7
80emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.7
81emb|CT573053.1| Medicago truncatula chromosome 5 clone mte1-8e5,... 40 6.7
82ref|NM_053131.1| Mus musculus protocadherin beta 6 (Pcdhb6), mRNA 40 6.7 
>ref|XM_463996.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1932

 Score =  105 bits (53), Expect = 1e-19
 Identities = 151/183 (82%), Gaps = 3/183 (1%)
 Strand = Plus / Minus

                                                                        
Query: 317  gccgccgcacgcgttgttcctgaggcagtcgacggcggggcggacggggtcgtagcccag 376
            ||||||||| | | || |||||||||||||| ||||||||| |||| || ||| | | | 
Sbjct: 1620 gccgccgcaggggctggtcctgaggcagtcggcggcggggctgacgcggccgtcgtcgaa 1561

                                                                        
Query: 377  ccccatggcgcagttgcacacggcctgcacctcggcgccgtcgtccccgag---caggtt 433
             ||||||||||||||||| |||| |||||||||| ||||| ||||| || |   ||||| 
Sbjct: 1560 gcccatggcgcagttgcagacggtctgcacctcgccgccgccgtcctcgcggcgcaggtc 1501

                                                                        
Query: 434  gatgttgctgagcacgatgtcgctgcatggcacggcgtcgctgcaggcgagcttgatggc 493
            ||||| ||||||||||||| ||  ||| ||||||||||||||||| || ||| |||| ||
Sbjct: 1500 gatgtcgctgagcacgatgccgacgcaaggcacggcgtcgctgcacgccagcctgatcgc 1441

               
Query: 494  ctc 496
            |||
Sbjct: 1440 ctc 1438
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  105 bits (53), Expect = 1e-19
 Identities = 151/183 (82%), Gaps = 3/183 (1%)
 Strand = Plus / Plus

                                                                           
Query: 317     gccgccgcacgcgttgttcctgaggcagtcgacggcggggcggacggggtcgtagcccag 376
               ||||||||| | | || |||||||||||||| ||||||||| |||| || ||| | | | 
Sbjct: 1570464 gccgccgcaggggctggtcctgaggcagtcggcggcggggctgacgcggccgtcgtcgaa 1570523

                                                                           
Query: 377     ccccatggcgcagttgcacacggcctgcacctcggcgccgtcgtccccgag---caggtt 433
                ||||||||||||||||| |||| |||||||||| ||||| ||||| || |   ||||| 
Sbjct: 1570524 gcccatggcgcagttgcagacggtctgcacctcgccgccgccgtcctcgcggcgcaggtc 1570583

                                                                           
Query: 434     gatgttgctgagcacgatgtcgctgcatggcacggcgtcgctgcaggcgagcttgatggc 493
               ||||| ||||||||||||| ||  ||| ||||||||||||||||| || ||| |||| ||
Sbjct: 1570584 gatgtcgctgagcacgatgccgacgcaaggcacggcgtcgctgcacgccagcctgatcgc 1570643

                  
Query: 494     ctc 496
               |||
Sbjct: 1570644 ctc 1570646



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 307      gccctccgccgccgccgcacgcgt 330
                |||| |||||||||||||||||||
Sbjct: 29964848 gcccaccgccgccgccgcacgcgt 29964871
to top
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1007_D04
          Length = 125503

 Score =  105 bits (53), Expect = 1e-19
 Identities = 151/183 (82%), Gaps = 3/183 (1%)
 Strand = Plus / Plus

                                                                        
Query: 317  gccgccgcacgcgttgttcctgaggcagtcgacggcggggcggacggggtcgtagcccag 376
            ||||||||| | | || |||||||||||||| ||||||||| |||| || ||| | | | 
Sbjct: 7567 gccgccgcaggggctggtcctgaggcagtcggcggcggggctgacgcggccgtcgtcgaa 7626

                                                                        
Query: 377  ccccatggcgcagttgcacacggcctgcacctcggcgccgtcgtccccgag---caggtt 433
             ||||||||||||||||| |||| |||||||||| ||||| ||||| || |   ||||| 
Sbjct: 7627 gcccatggcgcagttgcagacggtctgcacctcgccgccgccgtcctcgcggcgcaggtc 7686

                                                                        
Query: 434  gatgttgctgagcacgatgtcgctgcatggcacggcgtcgctgcaggcgagcttgatggc 493
            ||||| ||||||||||||| ||  ||| ||||||||||||||||| || ||| |||| ||
Sbjct: 7687 gatgtcgctgagcacgatgccgacgcaaggcacggcgtcgctgcacgccagcctgatcgc 7746

               
Query: 494  ctc 496
            |||
Sbjct: 7747 ctc 7749
to top
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0576F08
          Length = 135314

 Score =  105 bits (53), Expect = 1e-19
 Identities = 151/183 (82%), Gaps = 3/183 (1%)
 Strand = Plus / Plus

                                                                          
Query: 317    gccgccgcacgcgttgttcctgaggcagtcgacggcggggcggacggggtcgtagcccag 376
              ||||||||| | | || |||||||||||||| ||||||||| |||| || ||| | | | 
Sbjct: 133885 gccgccgcaggggctggtcctgaggcagtcggcggcggggctgacgcggccgtcgtcgaa 133944

                                                                          
Query: 377    ccccatggcgcagttgcacacggcctgcacctcggcgccgtcgtccccgag---caggtt 433
               ||||||||||||||||| |||| |||||||||| ||||| ||||| || |   ||||| 
Sbjct: 133945 gcccatggcgcagttgcagacggtctgcacctcgccgccgccgtcctcgcggcgcaggtc 134004

                                                                          
Query: 434    gatgttgctgagcacgatgtcgctgcatggcacggcgtcgctgcaggcgagcttgatggc 493
              ||||| ||||||||||||| ||  ||| ||||||||||||||||| || ||| |||| ||
Sbjct: 134005 gatgtcgctgagcacgatgccgacgcaaggcacggcgtcgctgcacgccagcctgatcgc 134064

                 
Query: 494    ctc 496
              |||
Sbjct: 134065 ctc 134067
to top
>dbj|AK106802.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-B12, full
            insert sequence
          Length = 1932

 Score =  105 bits (53), Expect = 1e-19
 Identities = 151/183 (82%), Gaps = 3/183 (1%)
 Strand = Plus / Minus

                                                                        
Query: 317  gccgccgcacgcgttgttcctgaggcagtcgacggcggggcggacggggtcgtagcccag 376
            ||||||||| | | || |||||||||||||| ||||||||| |||| || ||| | | | 
Sbjct: 1620 gccgccgcaggggctggtcctgaggcagtcggcggcggggctgacgcggccgtcgtcgaa 1561

                                                                        
Query: 377  ccccatggcgcagttgcacacggcctgcacctcggcgccgtcgtccccgag---caggtt 433
             ||||||||||||||||| |||| |||||||||| ||||| ||||| || |   ||||| 
Sbjct: 1560 gcccatggcgcagttgcagacggtctgcacctcgccgccgccgtcctcgcggcgcaggtc 1501

                                                                        
Query: 434  gatgttgctgagcacgatgtcgctgcatggcacggcgtcgctgcaggcgagcttgatggc 493
            ||||| ||||||||||||| ||  ||| ||||||||||||||||| || ||| |||| ||
Sbjct: 1500 gatgtcgctgagcacgatgccgacgcaaggcacggcgtcgctgcacgccagcctgatcgc 1441

               
Query: 494  ctc 496
            |||
Sbjct: 1440 ctc 1438
to top
>gb|BT017002.1| Zea mays clone EK07D2309H12.c mRNA sequence
          Length = 908

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 135/163 (82%), Gaps = 3/163 (1%)
 Strand = Plus / Minus

                                                                       
Query: 338 gaggcagtcgacggcggggcggacggggtcgtagcccagccccatggcgcagttgcacac 397
           |||||||||| |||||||  ||||| || ||||| | || || | |||||||||||||||
Sbjct: 521 gaggcagtcggcggcgggctggacgcggccgtagtcgaggccgacggcgcagttgcacac 462

                                                                       
Query: 398 ggcctgcacctcggcgccgtcgtccccgag---caggttgatgttgctgagcacgatgtc 454
            | |||||||||| || | |||||  || |   |||||||||||||||||| |||||| |
Sbjct: 461 cgtctgcacctcgccgtcatcgtcggcgcggcgcaggttgatgttgctgagaacgatgcc 402

                                                      
Query: 455 gctgcatggcacggcgtcgctgcaggcgagcttgatggcctcg 497
           | |||| |||||||||||||||||||||| |  ||||||||||
Sbjct: 401 ggtgcacggcacggcgtcgctgcaggcgaaccggatggcctcg 359
to top
>ref|XM_506449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.120
           mRNA
          Length = 629

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 267 gccgtcgtcgtcgacggctcctcctcctc 295
           |||||||||| ||||||||||||||||||
Sbjct: 192 gccgtcgtcgacgacggctcctcctcctc 164
to top
>ref|XM_479039.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 629

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 267 gccgtcgtcgtcgacggctcctcctcctc 295
           |||||||||| ||||||||||||||||||
Sbjct: 192 gccgtcgtcgacgacggctcctcctcctc 164
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 267      gccgtcgtcgtcgacggctcctcctcctc 295
                |||||||||| ||||||||||||||||||
Sbjct: 24434678 gccgtcgtcgacgacggctcctcctcctc 24434706
to top
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_B10
          Length = 100294

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 267   gccgtcgtcgtcgacggctcctcctcctc 295
             |||||||||| ||||||||||||||||||
Sbjct: 60545 gccgtcgtcgacgacggctcctcctcctc 60573
to top
>dbj|AK105814.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C08, full
           insert sequence
          Length = 629

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 267 gccgtcgtcgtcgacggctcctcctcctc 295
           |||||||||| ||||||||||||||||||
Sbjct: 192 gccgtcgtcgacgacggctcctcctcctc 164
to top
>dbj|AK062681.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-H05, full
           insert sequence
          Length = 629

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 267 gccgtcgtcgtcgacggctcctcctcctc 295
           |||||||||| ||||||||||||||||||
Sbjct: 192 gccgtcgtcgacgacggctcctcctcctc 164
to top
>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0088F07, complete sequence
          Length = 139180

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 307   gccctccgccgccgccgcacgcgt 330
             ||||||||||||||||||||||||
Sbjct: 34004 gccctccgccgccgccgcacgcgt 34027
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 307      gccctccgccgccgccgcacgcgt 330
                ||||||||||||||||||||||||
Sbjct: 21153221 gccctccgccgccgccgcacgcgt 21153244



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 462      ggcacggcgtcgctgcaggcgagcttgatggcct 495
                ||||||||||||||||| || |||||||| ||||
Sbjct: 26735979 ggcacggcgtcgctgcacgccagcttgatcgcct 26735946
to top
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07,
             complete sequence
          Length = 122120

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 462   ggcacggcgtcgctgcaggcgagcttgatggcct 495
             ||||||||||||||||| || |||||||| ||||
Sbjct: 17918 ggcacggcgtcgctgcacgccagcttgatcgcct 17885
to top
>gb|AC073363.10| Homo sapiens 3 BAC RP11-293N1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184092

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 157    caaacaaaaaacctagtagtta 178
              ||||||||||||||||||||||
Sbjct: 106778 caaacaaaaaacctagtagtta 106799
to top
>emb|AL356578.22| Human DNA sequence from clone RP11-14G9 on chromosome Xq22.3-24,
            complete sequence
          Length = 33432

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 368  gtagcccagccccatggcgcag 389
            ||||||||||||||||||||||
Sbjct: 3709 gtagcccagccccatggcgcag 3688
to top
>emb|CR354427.7| Zebrafish DNA sequence from clone DKEY-263N17 in linkage group 18,
             complete sequence
          Length = 164758

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 270   gtcgtcgtcgacggctcctcctcctc 295
             |||||||||| |||||||||||||||
Sbjct: 69023 gtcgtcgtcgtcggctcctcctcctc 69048
to top
>dbj|AK106049.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E12, full
            insert sequence
          Length = 1612

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 462  ggcacggcgtcgctgcaggcgagcttgatggcct 495
            ||||||||||||||||| || |||||||| ||||
Sbjct: 1272 ggcacggcgtcgctgcacgccagcttgatcgcct 1239
to top
>dbj|AK105858.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-H08, full
            insert sequence
          Length = 1634

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 462  ggcacggcgtcgctgcaggcgagcttgatggcct 495
            ||||||||||||||||| || |||||||| ||||
Sbjct: 1234 ggcacggcgtcgctgcacgccagcttgatcgcct 1201
to top
>dbj|AK071271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088D14, full
            insert sequence
          Length = 1528

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 462  ggcacggcgtcgctgcaggcgagcttgatggcct 495
            ||||||||||||||||| || |||||||| ||||
Sbjct: 1161 ggcacggcgtcgctgcacgccagcttgatcgcct 1128
to top
>emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in linkage group 18,
             complete sequence
          Length = 145250

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 270   gtcgtcgtcgacggctcctcctcctc 295
             |||||||||| |||||||||||||||
Sbjct: 26342 gtcgtcgtcgtcggctcctcctcctc 26367
to top
>ref|XM_530834.1| PREDICTED: Pan troglodytes LOC462073 (LOC462073), mRNA
          Length = 1434

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 462  ggcacggcgtcgctgcaggcg 482
            |||||||||||||||||||||
Sbjct: 1386 ggcacggcgtcgctgcaggcg 1406
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 312    ccgccgccgccgcacgcgttg 332
              |||||||||||||||||||||
Sbjct: 351664 ccgccgccgccgcacgcgttg 351684
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 312     ccgccgccgccgcacgcgttg 332
               |||||||||||||||||||||
Sbjct: 1082216 ccgccgccgccgcacgcgttg 1082236
to top
>gb|AY513239.1| Homo sapiens complement component 3 (C3) gene, complete cds
          Length = 46393

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 152   acacacaaacaaaaaacctag 172
             |||||||||||||||||||||
Sbjct: 45256 acacacaaacaaaaaacctag 45236
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 312    ccgccgccgccgcacgcgttg 332
              |||||||||||||||||||||
Sbjct: 963190 ccgccgccgccgcacgcgttg 963210
to top
>emb|CR610821.1| full-length cDNA clone CS0DK006YC23 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1536

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 462 ggcacggcgtcgctgcaggcg 482
           |||||||||||||||||||||
Sbjct: 278 ggcacggcgtcgctgcaggcg 298
to top
>emb|CR601326.1| full-length cDNA clone CS0DL007YK22 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1406

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 462 ggcacggcgtcgctgcaggcg 482
           |||||||||||||||||||||
Sbjct: 184 ggcacggcgtcgctgcaggcg 204
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 305     cagccctccgccgccgccgca 325
               |||||||||||||||||||||
Sbjct: 3890796 cagccctccgccgccgccgca 3890816
to top
>gb|AC008406.7| Homo sapiens chromosome 5 clone CTC-276P9, complete sequence
          Length = 178030

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 462   ggcacggcgtcgctgcaggcg 482
             |||||||||||||||||||||
Sbjct: 23773 ggcacggcgtcgctgcaggcg 23753
to top
>gb|AC008760.7| Homo sapiens chromosome 19 clone CTD-3128G10, complete sequence
          Length = 200167

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 152    acacacaaacaaaaaacctag 172
              |||||||||||||||||||||
Sbjct: 113100 acacacaaacaaaaaacctag 113120
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 260     cggcgcggccgtcgtcgtcgacggc 284
               |||||||||||||||| ||||||||
Sbjct: 8235152 cggcgcggccgtcgtcctcgacggc 8235176
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 260     cggcgcggccgtcgtcgtcgacggc 284
               |||||||||| ||||||||||||||
Sbjct: 4654766 cggcgcggccttcgtcgtcgacggc 4654790
to top
>gb|AF116428.1|REMB047R2 Rhizobium etli mutant MB047 RosR-transcriptionally regulated
           sequence
          Length = 475

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 305 cagccctccgccgccgccgca 325
           |||||||||||||||||||||
Sbjct: 208 cagccctccgccgccgccgca 228
to top
>gb|BC009412.1| Homo sapiens paired-like homeodomain transcription factor 1, mRNA
           (cDNA clone MGC:10891 IMAGE:3622592), complete cds
          Length = 1503

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 462 ggcacggcgtcgctgcaggcg 482
           |||||||||||||||||||||
Sbjct: 189 ggcacggcgtcgctgcaggcg 209
to top
>ref|NM_002653.3| Homo sapiens paired-like homeodomain transcription factor 1
           (PITX1), mRNA
          Length = 2373

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 462 ggcacggcgtcgctgcaggcg 482
           |||||||||||||||||||||
Sbjct: 278 ggcacggcgtcgctgcaggcg 298
to top
>emb|BX469914.4| Mouse DNA sequence from clone RP23-217J7 on chromosome X, complete
            sequence
          Length = 30886

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 147  tatagacacacaaacaaaaaa 167
            |||||||||||||||||||||
Sbjct: 9059 tatagacacacaaacaaaaaa 9039
to top
>emb|CT010517.11| Mouse DNA sequence from clone RP23-357P12 on chromosome 16, complete
              sequence
          Length = 188228

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 150    agacacacaaacaaaaaacct 170
              |||||||||||||||||||||
Sbjct: 167181 agacacacaaacaaaaaacct 167161
to top
>gb|AC164612.4| Mus musculus BAC clone RP23-361B11 from chromosome 9, complete sequence
          Length = 202803

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 35     cattgaagaactaacaaaaggcaagtggt 63
              ||||| |||| ||||||||||||||||||
Sbjct: 125044 cattggagaaataacaaaaggcaagtggt 125016
to top
>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region
          Length = 108553

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 259   gcggcgcggccgtcgtcgtcgacg 282
             |||||||||||| |||||||||||
Sbjct: 13231 gcggcgcggccgccgtcgtcgacg 13254
to top
>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0094K23, complete sequence
          Length = 167482

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   gccctccgccgccgccgcac 326
             ||||||||||||||||||||
Sbjct: 80614 gccctccgccgccgccgcac 80633
to top
>ref|XM_960514.1| Neurospora crassa OR74A hypothetical protein (NCU02925.1) partial
            mRNA
          Length = 1347

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 275  cgtcgacggctcctcctcct 294
            ||||||||||||||||||||
Sbjct: 1068 cgtcgacggctcctcctcct 1049
to top
>ref|XM_330112.1| Neurospora crassa OR74A hypothetical protein (NCU02925.1) partial
            mRNA
          Length = 1347

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 275  cgtcgacggctcctcctcct 294
            ||||||||||||||||||||
Sbjct: 1068 cgtcgacggctcctcctcct 1049
to top
>gb|AC102420.10| Mus musculus chromosome 8, clone RP24-553O21, complete sequence
          Length = 178616

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     ccatgtgtacatgcatgtaa 98
              ||||||||||||||||||||
Sbjct: 125206 ccatgtgtacatgcatgtaa 125187
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 148     atagacacacaaacaaaaaa 167
               ||||||||||||||||||||
Sbjct: 2473027 atagacacacaaacaaaaaa 2473008
to top
>ref|XM_972766.1| PREDICTED: Mus musculus protocadherin beta 6 (Pcdhb6), mRNA
          Length = 1820

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  aaaaggcaagtggtttttct 69
           ||||||||||||||||||||
Sbjct: 219 aaaaggcaagtggtttttct 238
to top
>gb|BT011462.1| Drosophila melanogaster RE29555 full insert cDNA
          Length = 2265

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 43   aactaacaaaaggcaagtggtttt 66
            ||||||| ||||||||||||||||
Sbjct: 2244 aactaactaaaggcaagtggtttt 2221
to top
>ref|XM_756076.1| Ustilago maydis 521 hypothetical protein (UM05022.1) partial mRNA
          Length = 5004

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 305  cagccctccgccgccgccgc 324
            ||||||||||||||||||||
Sbjct: 4506 cagccctccgccgccgccgc 4487
to top
>emb|CR392012.7| Zebrafish DNA sequence from clone CH211-253D24 in linkage group 2,
             complete sequence
          Length = 97633

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   atagacacacaaacaaaaaa 167
             ||||||||||||||||||||
Sbjct: 32184 atagacacacaaacaaaaaa 32203
to top
>emb|BX957288.10| Zebrafish DNA sequence from clone DKEY-146P4 in linkage group 12,
             complete sequence
          Length = 172591

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   ttttcacagctcggtgtgca 258
             ||||||||||||||||||||
Sbjct: 59194 ttttcacagctcggtgtgca 59175
to top
>emb|AJ781178.1| Influenza B virus (B/Barcelona/215/03) partial PB1 gene for
            polymerase 1, genomic RNA, isolate B/Barcelona/215/03
          Length = 2234

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 22   gcagttctttcttcattgaagaac 45
            ||||||| ||||||||||||||||
Sbjct: 1187 gcagttccttcttcattgaagaac 1164
to top
>gb|AC146561.22| Medicago truncatula clone mth2-12j18, complete sequence
          Length = 135940

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   atatagacacacaaacaaaa 165
             ||||||||||||||||||||
Sbjct: 21253 atatagacacacaaacaaaa 21272
to top
>gb|AF501263.1| Erwinia chrysanthemi phospholipase C (plcA) gene, partial cds; and
            HrpF (hrpF), HrpG (hrpG), HrcC (hrcC), HrpT (hrpT), HrpV
            (hrpV), HrpN harpin (hrpN), ORF1, HecB (hecB), and
            hemolysin/hemagglutinin-like protein HecA (hecA) genes,
            complete cds
          Length = 18931

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 463  gcacggcgtcgctgcaggcg 482
            ||||||||||||||||||||
Sbjct: 8031 gcacggcgtcgctgcaggcg 8050
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 310     ctccgccgccgccgcacgcg 329
               ||||||||||||||||||||
Sbjct: 1224823 ctccgccgccgccgcacgcg 1224804
to top
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    gaggcagtcgacggcggggc 357
              ||||||||||||||||||||
Sbjct: 169707 gaggcagtcgacggcggggc 169688
to top
>emb|AL606508.12| Mouse DNA sequence from clone RP23-180B9 on chromosome 11 Contains the 3'
              end of a novel gene and a CpG island, complete sequence
          Length = 189315

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 152    acacacaaacaaaaaacctagtagttac 179
              ||||| || |||||||||||||||||||
Sbjct: 178763 acacaaaaccaaaaaacctagtagttac 178736
to top
>ref|NM_143048.1| Drosophila melanogaster CG11089-RA (CG11089), mRNA
          Length = 2249

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 43   aactaacaaaaggcaagtggtttt 66
            ||||||| ||||||||||||||||
Sbjct: 2244 aactaactaaaggcaagtggtttt 2221
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    tcgacggcggggcggacggg 364
              ||||||||||||||||||||
Sbjct: 276905 tcgacggcggggcggacggg 276924
to top
>gb|AC171015.5| Gallus gallus BAC clone CH261-18L11 from chromosome ul, complete
             sequence
          Length = 215430

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 302   cttcagccctccgccgccgccgcacgcg 329
             |||| |||||||||||||||| ||||||
Sbjct: 65863 cttcggccctccgccgccgccccacgcg 65836
to top
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 407    ctcggcgccgtcgtccccgagcag 430
              |||||||||||| |||||||||||
Sbjct: 584738 ctcggcgccgtcatccccgagcag 584715
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 263     cgcggccgtcgtcgtcgacg 282
               ||||||||||||||||||||
Sbjct: 3959693 cgcggccgtcgtcgtcgacg 3959712
to top
>gb|AY013788.1| Mus musculus protocadherin beta 6 mRNA, complete cds
          Length = 2319

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 50 aaaaggcaagtggtttttct 69
          ||||||||||||||||||||
Sbjct: 31 aaaaggcaagtggtttttct 50
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 309     cctccgccgccgccgcacgc 328
               ||||||||||||||||||||
Sbjct: 2934305 cctccgccgccgccgcacgc 2934324
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 307      gccctccgccgccgccgcac 326
                ||||||||||||||||||||
Sbjct: 19485207 gccctccgccgccgccgcac 19485226
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 305     cagccctccgccgccgccgc 324
               ||||||||||||||||||||
Sbjct: 4121588 cagccctccgccgccgccgc 4121607
to top
>gb|AC008205.7|AC008205 Drosophila melanogaster, chromosome 3R, region 96A-96B, BAC clone
              BACR33F18, complete sequence
          Length = 215711

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     aactaacaaaaggcaagtggtttt 66
              ||||||| ||||||||||||||||
Sbjct: 167722 aactaactaaaggcaagtggtttt 167699
to top
>gb|AC023050.36| Homo sapiens 12 BAC RP11-428G5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186864

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    acacacaaacaaaaaaccta 171
              ||||||||||||||||||||
Sbjct: 126454 acacacaaacaaaaaaccta 126435
to top
>gb|AF296835.1|T8M17 Arabidopsis thaliana BAC T8M17
          Length = 114695

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    tcattgaagaactaacaaaa 53
             ||||||||||||||||||||
Sbjct: 78357 tcattgaagaactaacaaaa 78376
to top
>gb|AC020974.4|AC020974 Mus musculus chromosome 18 clone RP23-92D17, complete sequence
          Length = 162639

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    aaaaggcaagtggtttttct 69
             ||||||||||||||||||||
Sbjct: 66160 aaaaggcaagtggtttttct 66179
to top
>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1590_E05
          Length = 148205

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   cagccctccgccgccgccgc 324
             ||||||||||||||||||||
Sbjct: 21211 cagccctccgccgccgccgc 21230
to top
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0654B04
          Length = 156907

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 307   gccctccgccgccgccgcacgcgt 330
             |||| |||||||||||||||||||
Sbjct: 65124 gcccaccgccgccgccgcacgcgt 65147
to top
>emb|BX649277.5| Zebrafish DNA sequence from clone DKEYP-67A10 in linkage group 20,
              complete sequence
          Length = 125366

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    gatatagacacacaaacaaaaaac 168
              |||||| |||||||||||||||||
Sbjct: 122274 gatataaacacacaaacaaaaaac 122297
to top
>dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0458D06
          Length = 166038

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    cagccctccgccgccgccgc 324
              ||||||||||||||||||||
Sbjct: 114701 cagccctccgccgccgccgc 114720
to top
>ref|NM_208031.1| Eremothecium gossypii AAR136Wp (AAR136W), mRNA
          Length = 1854

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 407 ctcggcgccgtcgtccccgagcag 430
           |||||||||||| |||||||||||
Sbjct: 531 ctcggcgccgtcatccccgagcag 508
to top
>gb|AE003749.3| Drosophila melanogaster chromosome 3R, section 87 of 118 of the complete
              sequence
          Length = 228433

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     aactaacaaaaggcaagtggtttt 66
              ||||||| ||||||||||||||||
Sbjct: 171292 aactaactaaaggcaagtggtttt 171269
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 247    gctcggtgtgcagcggcgcg 266
              ||||||||||||||||||||
Sbjct: 679010 gctcggtgtgcagcggcgcg 678991
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 263     cgcggccgtcgtcgtcgacg 282
               ||||||||||||||||||||
Sbjct: 1055355 cgcggccgtcgtcgtcgacg 1055336
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 309     cctccgccgccgccgcacgc 328
               ||||||||||||||||||||
Sbjct: 2934249 cctccgccgccgccgcacgc 2934268
to top
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145661

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   cctccgccgccgccgcacgc 328
             ||||||||||||||||||||
Sbjct: 81797 cctccgccgccgccgcacgc 81778
to top
>emb|CT573053.1| Medicago truncatula chromosome 5 clone mte1-8e5, COMPLETE SEQUENCE
          Length = 106640

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   atatagacacacaaacaaaa 165
             ||||||||||||||||||||
Sbjct: 46375 atatagacacacaaacaaaa 46356
to top
>ref|NM_053131.1| Mus musculus protocadherin beta 6 (Pcdhb6), mRNA
          Length = 2319

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 50 aaaaggcaagtggtttttct 69
          ||||||||||||||||||||
Sbjct: 31 aaaaggcaagtggtttttct 50


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,088,547
Number of Sequences: 3902068
Number of extensions: 6088547
Number of successful extensions: 194672
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 190790
Number of HSP's gapped (non-prelim): 3872
length of query: 497
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 475
effective length of database: 17,147,199,772
effective search space: 8144919891700
effective search space used: 8144919891700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top