>EXOS8_HUMAN (Q96B26) Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal|
           RNA-processing protein 43) (Exosome component 8) (p9)
           (Opa-interacting protein 2)
          Length = 276

 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 32/104 (30%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
 Frame = -3

Query: 507 NEGKTKYELVNREKRKLTLGDIPFPLTCALHKDSIL-VDPTAEEESIIETSVTVVLDSSG 331
           NE     E+  ++K  L +   P   + A+  D++L VDPT EEE +   ++T+V+D  G
Sbjct: 171 NEETALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTGEEEHLATGTLTIVMDEEG 230

Query: 330 RLVSIQKPGGGVTSMAAIKACIGLAKERGQKLKEILTDSIEAME 199
           +L  + KPGG   + A ++ C+  A  R +++K+++ + I++M+
Sbjct: 231 KLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDEVIKSMK 274

>ECX2_PYRFU (Q8U0M0) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 277

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 31/109 (28%), Positives = 62/109 (56%)
 Frame = -3

Query: 534 DGRVFTVGGNEGKTKYELVNREKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSV 355
           + RV  V  NE   + E++  EK  L +  IP  +T A   + ++VDPT EEE I++  +
Sbjct: 163 NARVPKVLYNEETGEVEILE-EKEPLPVEKIPISVTFAKIGNYLVVDPTLEEEQIMDGRL 221

Query: 354 TVVLDSSGRLVSIQKPGGGVTSMAAIKACIGLAKERGQKLKEILTDSIE 208
           T+  D +G + ++QK  GG   +  +   +  A ++ +++++I+ +++E
Sbjct: 222 TITTDETGHISAVQKSEGGAFKLEEVMYAVETAFKKAEEIRKIILNALE 270

>EXOS8_MOUSE (Q9D753) Exosome complex exonuclease RRP43 (EC 3.1.13.-) (Ribosomal|
           RNA-processing protein 43) (Exosome component 8)
          Length = 276

 Score = 56.6 bits (135), Expect = 4e-08
 Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
 Frame = -3

Query: 507 NEGKTKYELVNREKRKLTLGDIPFPLTCALHKDSIL-VDPTAEEESIIETSVTVVLDSSG 331
           NE     E+  ++K  L +   P   + A+  D++L VDPT EEE +   ++TVV D  G
Sbjct: 171 NEETALAEVNLKKKSYLNVRTNPVATSFAVFDDTLLIVDPTGEEEHLSTGTLTVVTDEDG 230

Query: 330 RLVSIQKPGGGVTSMAAIKACIGLAKERGQKLKEILTDSIEAM 202
           +L  + KPGG   + A ++ C+  A  R +++ ++L + I++M
Sbjct: 231 KLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVSKLLDEVIQSM 273

>ECX2_PYRHO (O59224) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 274

 Score = 55.5 bits (132), Expect = 9e-08
 Identities = 30/109 (27%), Positives = 63/109 (57%)
 Frame = -3

Query: 534 DGRVFTVGGNEGKTKYELVNREKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSV 355
           + +V  V  NE   + E++  EK  L +  IP P+T A   + ++VDP+ EEE +++  +
Sbjct: 163 NAKVPKVEYNEETGEVEILE-EKEPLPVERIPIPVTFAKIGNILVVDPSLEEELVMDGRL 221

Query: 354 TVVLDSSGRLVSIQKPGGGVTSMAAIKACIGLAKERGQKLKEILTDSIE 208
           TV  D +G + ++QK  GG   +  +   +  A ++ +++++I+ ++I+
Sbjct: 222 TVTTDETGHISAVQKGEGGAFKLEEVMYAVETAFKKAEEIRKIVLEAIK 270

>ECX2_PYRAB (Q9V118) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 274

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 27/109 (24%), Positives = 62/109 (56%)
 Frame = -3

Query: 534 DGRVFTVGGNEGKTKYELVNREKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSV 355
           + RV  V  NE   + E ++ E   L +  IP P+T A   + ++VDP+ +EE +++  +
Sbjct: 163 NARVPKVRYNEETGEVETLD-ETEPLPVEKIPVPVTFAKIGNILVVDPSLDEELVMDGKI 221

Query: 354 TVVLDSSGRLVSIQKPGGGVTSMAAIKACIGLAKERGQKLKEILTDSIE 208
           T+  D +G + ++QK  GG   +  +   +  A ++ +++++++ +++E
Sbjct: 222 TITTDETGHISAVQKSEGGAFKLEEVMYAVETAFKKAEEIRKLILEAVE 270

>ECX2_PYRKO (Q5JIR7) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 272

 Score = 52.4 bits (124), Expect = 8e-07
 Identities = 27/96 (28%), Positives = 54/96 (56%)
 Frame = -3

Query: 516 VGGNEGKTKYELVNREKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSVTVVLDS 337
           V  NE   + E+++ E   L +  +P P+T A   +SI+VDP+ +EE +++  +T+  D 
Sbjct: 169 VNYNEETGEVEILD-EYEPLPVNHVPIPVTFAKIGNSIVVDPSLDEERVMDGRLTITTDE 227

Query: 336 SGRLVSIQKPGGGVTSMAAIKACIGLAKERGQKLKE 229
           +G + + QK   G   M  +   + +A ++G +++E
Sbjct: 228 TGHISAAQKGEAGAFKMEEVMYALEVALKKGNEIRE 263

>ECX2_METAC (Q8TGX5) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 266

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 25/87 (28%), Positives = 47/87 (54%)
 Frame = -3

Query: 459 LTLGDIPFPLTCALHKDSILVDPTAEEESIIETSVTVVLDSSGRLVSIQKPGGGVTSMAA 280
           L + ++P  +T A     ++VDP+ +EE++ ET +T+V  S G +  +QK G    + A 
Sbjct: 180 LAMKEMPVGITIAKIGSKLMVDPSLDEEAVCETKLTIVSSSDGSVAGMQKMGISPLTEAE 239

Query: 279 IKACIGLAKERGQKLKEILTDSIEAME 199
           +   I LA E+  +L+ +  + +   E
Sbjct: 240 LFEAIDLALEKAAELRGLYLEGLAKSE 266

>ECX2_METKA (Q8TYC2) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 267

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 25/85 (29%), Positives = 47/85 (55%)
 Frame = -3

Query: 486 ELVNREKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSVTVVLDSSGRLVSIQKP 307
           E++  +   L + D P  +T A   + +LVDP  EEE I++T +TV +  SG + ++QK 
Sbjct: 176 EVMEEDTEPLAINDFPISVTIAKVGEYLLVDPCLEEEVIMDTRLTVTVTESGEVCAVQKG 235

Query: 306 GGGVTSMAAIKACIGLAKERGQKLK 232
             G      ++  I LA ++ ++++
Sbjct: 236 ELGDFPEHLLEDAIDLATKKAEEVR 260

>ECX2_METMA (Q8PTT7) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 266

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 24/91 (26%), Positives = 48/91 (52%)
 Frame = -3

Query: 471 EKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSVTVVLDSSGRLVSIQKPGGGVT 292
           E   L + ++P  +T A     ++VDP+ +EE++ ET +T+V  S G +  +QK G    
Sbjct: 176 ENVPLAMKEMPVGITLAKIGSKLMVDPSLDEEAVCETKLTIVSSSDGSVAGMQKMGPVPL 235

Query: 291 SMAAIKACIGLAKERGQKLKEILTDSIEAME 199
           + A +   I +A E+  +++ +  + +   E
Sbjct: 236 TEAELFEAIDMAIEKAAEIRGLYLEGLAKSE 266

>ECX2_AERPE (Q9YC05) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 276

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 22/66 (33%), Positives = 39/66 (59%)
 Frame = -3

Query: 405 ILVDPTAEEESIIETSVTVVLDSSGRLVSIQKPGGGVTSMAAIKACIGLAKERGQKLKEI 226
           I+VDP  EEE++ +  +   +D +GR+V +QK G G  + A I+  IG + E  +   + 
Sbjct: 210 IVVDPNIEEEAVSDVRLVTAVDENGRIVGLQKTGMGSLTEADIETMIGYSLEASKVYFKA 269

Query: 225 LTDSIE 208
           L ++I+
Sbjct: 270 LEEAIK 275

>ECX2_ARCFU (O29756) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 259

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
 Frame = -3

Query: 459 LTLGDIPFPLTCALHKDSILVDPTAEEESIIETSVTVVLDSSGRLVSIQKPGGGVTSM-- 286
           L + D+P  +T  +  +  LVDP+ EE S+ +T++T+  D    +V++QK GG +     
Sbjct: 178 LPVRDLPVSVTSLIVGNKYLVDPSREEMSVGDTTLTITTDKDDNVVAMQKSGGYLLDEKL 237

Query: 285 --AAIKACIGLAKERGQKLKEI 226
               +   I  A++  +K KEI
Sbjct: 238 FDELLDVSINCARKLREKFKEI 259

>ECX2_THEAC (Q9HIP1) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 260

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 23/81 (28%), Positives = 42/81 (51%)
 Frame = -3

Query: 471 EKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSVTVVLDSSGRLVSIQKPGGGVT 292
           E  KL +   P  +T     D+++ DP+ EE+ I    +TV     G + ++QK   G  
Sbjct: 176 EDFKLPVSSTPISVTMVKIGDTLVCDPSLEEDQICGGRITVTTTEDGHIRAMQKGEIGAF 235

Query: 291 SMAAIKACIGLAKERGQKLKE 229
           ++  +K  + ++ E G+KL+E
Sbjct: 236 TVEDVKKAVKMSLEVGKKLRE 256

>ECX2_SULTO (Q975G9) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 275

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
 Frame = -3

Query: 486 ELVNREKRKLTLGDIPFPL---TCALHKDSILVDPTAEEESIIETSVTVVLDSSGRLVSI 316
           +++  EK  +T   I +P+   T A     ++VDP+ +EESI +  ++      GR+V +
Sbjct: 181 KIIKEEKTDVT--PIAYPVVTVTVAKIGKYLVVDPSLDEESIADVKISFSYVQDGRIVGM 238

Query: 315 QKPGGGVTSMAAIKACIGLAKERGQKLKEILTDSI 211
           QK   G  S+  +     LA+   QKL E L   I
Sbjct: 239 QKSNFGSLSLQEVDVAESLARSASQKLFEELKKQI 273

>RRP43_SCHPO (Q10205) Putative exosome complex exonuclease RRP43 (EC 3.1.13.-)|
           (Ribosomal RNA-processing protein 43)
          Length = 270

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 21/55 (38%), Positives = 32/55 (58%)
 Frame = -3

Query: 411 DSILVDPTAEEESIIETSVTVVLDSSGRLVSIQKPGGGVTSMAAIKACIGLAKER 247
           D +L DPT EEE +    +T++L+SS  +V I K GG       +K CI +A+ +
Sbjct: 215 DKLLADPTDEEEDLSTEFLTIMLNSSKNIVKIIKLGGTHIQPLLLKKCIEVARSK 269

>ECX2_METTH (O26778) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 271

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
 Frame = -3

Query: 483 LVNREKRKLTLGDIPFP-----LTCALHK--DSILVDPTAEEESIIETSVTVVLDSSGRL 325
           ++NREK +      P P     L C   K  + I++DP+ EEE I+   +++ +   G +
Sbjct: 178 VINREKMQ------PLPVNRKALMCTFAKIGNEIVLDPSLEEEDILTARISIGVTEEGSI 231

Query: 324 VSIQKPGGGVTSMAAIKACIGLAKERGQKLKEILTDSI 211
            ++QK G G  +   +   + +A E+  +L E L  S+
Sbjct: 232 CAMQKGGEGPLTRDDVLKAVSIAVEKVPQLIEYLDKSM 269

>ECX2_THEVO (Q97BZ4) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 260

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 22/81 (27%), Positives = 43/81 (53%)
 Frame = -3

Query: 471 EKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSVTVVLDSSGRLVSIQKPGGGVT 292
           E  KL + + P  +T     D+++ DP+ EE+ I    +TV     G + ++QK   GV 
Sbjct: 176 EDFKLPVVNTPISVTMVKIGDTLVCDPSLEEDQICGGRITVTTTEDGHIRAMQKGEIGVF 235

Query: 291 SMAAIKACIGLAKERGQKLKE 229
           ++  +K  I ++ + G+ ++E
Sbjct: 236 TLDDVKKAIKMSLKVGKNIRE 256

>RNPH_BACSU (P28619) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA|
           nucleotidyltransferase)
          Length = 245

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
 Frame = -3

Query: 414 KDSILVDPTAEEESIIETSVTVVLDSSGRLVSIQKPGGGVT-SMAAIKACIGLAKERGQK 238
           +  IL+D   EE+S  E  + V++  SGR V +Q  G   T S   +   +GLA++  Q+
Sbjct: 169 EQGILLDLNYEEDSSAEVDMNVIMTGSGRFVELQGTGEEATFSREDLNGLLGLAEKGIQE 228

Query: 237 L----KEILTDSIEAME 199
           L    KE+L DS+  ++
Sbjct: 229 LIDKQKEVLGDSLPELK 245

>ECX2_SULSO (Q9UXC0) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 275

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -3

Query: 405 ILVDPTAEEESIIETSVTVVLDSSGRLVSIQKPGGGVTSMAAIKACIGLAKERGQKLKEI 226
           ++VDP  +EESI++  ++       ++V IQK G G  S+  I      A+    KL E 
Sbjct: 209 LVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSLQDIDQAENTARSTAVKLLEE 268

Query: 225 L 223
           L
Sbjct: 269 L 269

>EXOS5_MOUSE (Q9CRA8) Exosome complex exonuclease RRP46 (EC 3.1.13.-) (Ribosomal|
           RNA-processing protein 46) (Exosome component 5)
          Length = 235

 Score = 35.4 bits (80), Expect = 0.10
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = -3

Query: 432 LTCALHKDSILV-DPTAEEESIIETSVTVVLDSSGR--LVSIQKPGGGVTSMAAIKACIG 262
           +TCAL  D  LV DPT ++E      +T  LDS+ +  L+S  K   G+ S A ++ C+ 
Sbjct: 155 VTCALDSDGNLVLDPTTKQEKEARAILTFALDSAEQKLLMSTTK---GLYSDAELQQCLA 211

Query: 261 LAKERGQKLKEILTDSIE 208
            A+   Q +     +S++
Sbjct: 212 AAQAASQHIFRFYRESLQ 229

>RRP45_SCHPO (O74918) Putative exosome complex exonuclease RRP45 (EC 3.1.13.-)|
           (Ribosomal RNA-processing protein 45)
          Length = 291

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
 Frame = -3

Query: 519 TVGGNEGKTKYELVNREKRKLTLGDIPFPLTCALHKDSIL--VDPTAEEESIIETSVTVV 346
           TV G E  T + +  R    L++  +P  +T +   +  L  VD T EEE +   S+T+ 
Sbjct: 167 TVVGEE-VTVHPVEERVPVPLSILHMPICVTFSFFNNGELAIVDATLEEEDLCNGSMTIT 225

Query: 345 LDSSGRLVSIQKPGGGVTSMAAIKACIGLAKERGQKLKEILTDSIE 208
           L+ +  +  I K GG +   + I +C   A +    +  ++  +++
Sbjct: 226 LNKNREVCQIYKAGGIIIDPSKIISCAKTAFDIAVSVCSVIQQALD 271

>EXOS5_HUMAN (Q9NQT4) Exosome complex exonuclease RRP46 (EC 3.1.13.-) (Ribosomal|
           RNA-processing protein 46) (Exosome component 5) (p12B)
           (Chronic myelogenous leukemia tumor antigen 28)
          Length = 235

 Score = 32.7 bits (73), Expect = 0.66
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = -3

Query: 432 LTCALHKDSILV-DPTAEEESIIETSVTVVLDSSGRLVSIQKPGGGVTSMAAIKACIGLA 256
           + CAL  D  LV DPT+++E      +T  LDS  R + +     G+ S   ++ C+  A
Sbjct: 155 VACALDSDGTLVLDPTSKQEKEARAVLTFALDSVERKL-LMSSTKGLYSDTELQQCLAAA 213

Query: 255 KERGQKLKEILTDSIE 208
           +   Q +     +S++
Sbjct: 214 QAASQHVFRFYRESLQ 229

>TAUB_RHILO (Q98DW6) Taurine import ATP-binding protein tauB (EC 3.6.3.36)|
          Length = 257

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
 Frame = -3

Query: 486 ELVNREKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSVTVVLDSSGRLVSIQKP 307
           + + RE+ + TL D    L  A H   ++V    EE  ++ T + V+    GR+V   +P
Sbjct: 164 DALTRERMQTTLLD----LWTASHAGVLMVTHGIEEALVLATRIVVLAPGPGRVVRTFEP 219

Query: 306 G-----GGVTSMAAIKACIGLAKERGQKLKEILTDSI 211
           G          + AIKA    A  RG+     LTD+I
Sbjct: 220 GFSRRYAAGEPIRAIKADPAFATARGE-----LTDAI 251

>ECX2_PYRAE (Q8ZVN0) Probable exosome complex exonuclease 2 (EC 3.1.13.-)|
          Length = 274

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 24/98 (24%), Positives = 46/98 (46%)
 Frame = -3

Query: 501 GKTKYELVNREKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSVTVVLDSSGRLV 322
           G  K +  N+    + +   P  ++     + + +DPT EEE  ++  +T    S  ++V
Sbjct: 179 GVVKLDRNNKAPLPVDISKAPIAVSVGKIGNVLFLDPTFEEELSLDGRITFTF-SEDKIV 237

Query: 321 SIQKPGGGVTSMAAIKACIGLAKERGQKLKEILTDSIE 208
           + QK  G  T  + I+A + LA     +L E L  +++
Sbjct: 238 AAQKTLGYFT-QSEIEAALNLALRGRDRLLEALKSALK 274

>YA3B_SCHPO (Q09716) Hypothetical protein C18B11.11 in chromosome I|
          Length = 1294

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
 Frame = +1

Query: 7   RKQTWKNNAANIVESYAGYGLLHLAFVTRKIIP---QLKATKFLCHYQWQYNH*ISTICT 177
           R  TW++   NI+ES A Y L HL      + P        KF    +  +++   T+  
Sbjct: 369 RPGTWQHIEPNIIESIASYQLQHLLLFNEILKPDSNHFVLEKFHEFLKINFSYLTPTLSQ 428

Query: 178 DLFSLVDFHCFNGVREYFLQ----LLSSFF 255
            LF+++D        E +L+    LL S+F
Sbjct: 429 KLFTVLDLRSQLPYSEGWLEDQTILLKSYF 458

>TRMU_CAUCR (P58074) Probable tRNA|
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           (EC 2.1.1.61)
          Length = 383

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 19/62 (30%), Positives = 33/62 (53%)
 Frame = -3

Query: 534 DGRVFTVGGNEGKTKYELVNREKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSV 355
           DGRV  +G +EG T+Y +  R    + +GD  F +     K  ++V P    E+++  S+
Sbjct: 237 DGRV--LGRHEGVTRYTIGQRRGLNIAVGDPLFVVKINADKRQVIVGP---REALLTASL 291

Query: 354 TV 349
           T+
Sbjct: 292 TL 293

>YNR6_YEAST (P53882) Hypothetical 67.4 kDa protein in RPS3-PSD1 intergenic|
           region
          Length = 636

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
 Frame = +2

Query: 128 YVTTSGSTTTELALFAPTYSAWSTSIASMESVSISFNFCPLSFAKPMHALIAAMDVTPPP 307
           Y+++  +T+ +++  +   S+W ++I+S  ++S     CP S ++       +  ++   
Sbjct: 213 YLSSISATSFQISTTSELSSSWFSTISSPSTISNKDTTCP-SSSRNTSTSFYSSSLSSTN 271

Query: 308 GFCIDTK----RPEESRTTV--------TEVSIIDSSSAVGSTRILSLWSAHVRGNGMSP 451
            F   +K     P  S +TV        T  S+  SSS V S R  S  S+    +  S 
Sbjct: 272 DFSTISKSSKLSPSASSSTVSISTISVPTSSSVSSSSSKVPSNRPSSSSSSDDTTSAYSS 331

Query: 452 RVSFLFSLFTNSYLVLPSLPPTVNT 526
             +F     T S     S+PPT  T
Sbjct: 332 TYTFQSLQSTTS----SSIPPTTQT 352

>CYSK_STAHA (Q59918) Cysteine synthase (EC 2.5.1.47) (O-acetylserine|
           sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase)
           (Fragment)
          Length = 155

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 20/53 (37%), Positives = 31/53 (58%)
 Frame = -3

Query: 378 ESIIETSVTVVLDSSGRLVSIQKPGGGVTSMAAIKACIGLAKERGQKLKEILT 220
           +SII+    + +++S R+   +    G++S AAI A I  AKE G K K +LT
Sbjct: 85  DSIIQVGNDIAMETSRRVAKEEGILAGISSGAAIHAAIQKAKELG-KGKTVLT 136

>SYN_ENTFA (Q831X4) Asparaginyl-tRNA synthetase (EC 6.1.1.22)|
           (Asparagine--tRNA ligase) (AsnRS)
          Length = 450

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +2

Query: 347 TTVTEVSIIDSSSAVGSTRILSLWSAHVRGNGMSPRVSFL 466
           T V ++ IIDS+  VG T  +  W A+ R +G   +++FL
Sbjct: 5   TNVEQIQIIDSNKHVGETVKIGAWIANKRSSG---KIAFL 41

>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)|
           (Protein kinase A interference protein)
          Length = 376

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
 Frame = +2

Query: 146 STTTELALFAPTYSAWSTSIASMESVSISFNFCPLSFAKPMHALIAAMDVTPPPGFCI-D 322
           S+T+  +L + T S  STSIAS+   S SF+    S +    +  A+ D +    F I  
Sbjct: 73  SSTSSRSLVSHTSS--STSIASISFTSFSFS----SDSSTSSSSSASSDSSSSSSFSISS 126

Query: 323 TKRPEESRTTVTEVSIIDSSSAVGST 400
           T    ES T+ T+ S   SSS++ ST
Sbjct: 127 TSATSESSTSSTQTS-TSSSSSLSST 151

>SYV_MOUSE (Q9Z1Q9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS) (Protein G7a)
          Length = 1263

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 348 VLDSSGRLVSIQKPGGGVTSMAAIKACIGLAKERG 244
           ++DS G L+++  P  G+    A KA +   KERG
Sbjct: 613 IMDSKGALINVPPPFLGLPRFEARKAVLAALKERG 647

>CLUL1_HUMAN (Q15846) Clusterin-like protein 1 precursor (Retinal-specific|
           clusterin-like protein)
          Length = 466

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +1

Query: 403 NTILVECTCERKWNVTKSKLP--FFSVYQFIFGF 498
           N + +  TC+  W+  K+K+   F  +YQF+F F
Sbjct: 123 NCMRIYTTCQPSWSSVKNKIERFFRKIYQFLFPF 156

>ADG3_SCHPO (O74851) Protein adg3 precursor|
          Length = 1131

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = +2

Query: 323 TKRPEESRTTVTEVSIIDSSSAVGSTRILSLWSAHVRGNGMSPRVSFLFSLFTNSYLVLP 502
           T     +  T+T+ SI  S S+  S    S +S+ +  N ++   S + S+ ++SY  +P
Sbjct: 780 TSSSSSATPTITQSSISTSVSSQSSMN--SSYSSPISSNSVTSSTSIISSIASSSYTSIP 837

Query: 503 SL 508
           S+
Sbjct: 838 SI 839

>SP2_HUMAN (Q02086) Transcription factor Sp2|
          Length = 606

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 16/66 (24%), Positives = 31/66 (46%)
 Frame = -3

Query: 495 TKYELVNREKRKLTLGDIPFPLTCALHKDSILVDPTAEEESIIETSVTVVLDSSGRLVSI 316
           T     N++ RK +L     P+  A   +++L++ TA+           ++ +   L+ +
Sbjct: 231 TPLSKTNKKARKKSLPASQPPVAVAEQVETVLIETTADN----------IIQAGNNLLIV 280

Query: 315 QKPGGG 298
           Q PGGG
Sbjct: 281 QSPGGG 286

>ARH_MOUSE (Q8C142) Low density lipoprotein receptor adapter protein 1|
           (Autosomal recessive hypercholesterolemia protein
           homolog)
          Length = 308

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 10/52 (19%)
 Frame = -3

Query: 318 IQKPGGGVTSMAAIKACIGLAKERGQKLKE----------ILTDSIEAMEVD 193
           +++P G   S AA+K  +  AK  G+KL++          ILTDS+ +  ++
Sbjct: 57  VERPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIILTDSLTSQLIE 108


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,333,532
Number of Sequences: 219361
Number of extensions: 1532077
Number of successful extensions: 4534
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4533
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)