Clone Name | rbart38f10 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 327 bits (165), Expect = 2e-86 Identities = 273/309 (88%) Strand = Plus / Minus Query: 113 ttgacccgaatcacctggccgttaatccacccggcggcgtcaccacagagaaagccgacc 172 ||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||| ||| Sbjct: 4287941 ttgacacgaatgacttggccgttgatccacccggcggcgtcggtgcagaggaagcccacc 4287882 Query: 173 accggcgccacgtccgccggctcgccgatgcgcttcatggggcactcgctggcgacggcc 232 ||||||||||||||| |||||||||||| ||| ||| |||||||||| ||||||||| Sbjct: 4287881 accggcgccacgtccatcggctcgccgatccgccccatcgggcactcgccggcgacggca 4287822 Query: 233 ctcacgcgctcctcggacttcccggcgtaaaacatgggcgtggcgaccggccccggcgcc 292 |||||||||||| ||| |||||||| ||||| ||||| |||||||||||||||||| Sbjct: 4287821 gcgacgcgctcctcgctcttgccggcgtagaacatcggcgtcgcgaccggccccggcgcc 4287762 Query: 293 acgctgttggccgtgatgcccgtcccggcgagctccttggccagcaccttggtcatcgcc 352 |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4287761 acgctgttcgccgtgatccccgtcccggcgagctccttggccagcaccttcgtcatcgcc 4287702 Query: 353 tccacggccgccttcgtcgccacgtacgcgccatagcctggccggagcgaccccacgttc 412 ||||| |||||||||||||||||||||||||| || || |||||||| ||||||||||| Sbjct: 4287701 tccaccgccgccttcgtcgccacgtacgcgccgtacccgggccggagggaccccacgttg 4287642 Query: 413 gacgacgag 421 ||||||||| Sbjct: 4287641 gacgacgag 4287633
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 327 bits (165), Expect = 2e-86 Identities = 273/309 (88%) Strand = Plus / Minus Query: 113 ttgacccgaatcacctggccgttaatccacccggcggcgtcaccacagagaaagccgacc 172 ||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||| ||| Sbjct: 133162 ttgacacgaatgacttggccgttgatccacccggcggcgtcggtgcagaggaagcccacc 133103 Query: 173 accggcgccacgtccgccggctcgccgatgcgcttcatggggcactcgctggcgacggcc 232 ||||||||||||||| |||||||||||| ||| ||| |||||||||| ||||||||| Sbjct: 133102 accggcgccacgtccatcggctcgccgatccgccccatcgggcactcgccggcgacggca 133043 Query: 233 ctcacgcgctcctcggacttcccggcgtaaaacatgggcgtggcgaccggccccggcgcc 292 |||||||||||| ||| |||||||| ||||| ||||| |||||||||||||||||| Sbjct: 133042 gcgacgcgctcctcgctcttgccggcgtagaacatcggcgtcgcgaccggccccggcgcc 132983 Query: 293 acgctgttggccgtgatgcccgtcccggcgagctccttggccagcaccttggtcatcgcc 352 |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 132982 acgctgttcgccgtgatccccgtcccggcgagctccttggccagcaccttcgtcatcgcc 132923 Query: 353 tccacggccgccttcgtcgccacgtacgcgccatagcctggccggagcgaccccacgttc 412 ||||| |||||||||||||||||||||||||| || || |||||||| ||||||||||| Sbjct: 132922 tccaccgccgccttcgtcgccacgtacgcgccgtacccgggccggagggaccccacgttg 132863 Query: 413 gacgacgag 421 ||||||||| Sbjct: 132862 gacgacgag 132854
>ref|XM_469741.1| Oryza sativa (japonica cultivar-group), mRNA Length = 804 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 340 cttggtcatcgcctccacggccgccttcgtcgccacgtacgcgccatagcctggccggag 399 |||||||||| ||||||| |||||||| ||||| ||||||| | || || |||||||| Sbjct: 561 cttggtcatcacctccaccgccgccttgctcgccgcgtacgccgcgtaccccggccggag 502 Query: 400 cgaccccacgttcgacgacgag 421 |||||| ||| |||||||||| Sbjct: 501 cgacccgacgcccgacgacgag 480
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 340 cttggtcatcgcctccacggccgccttcgtcgccacgtacgcgccatagcctggccggag 399 |||||||||| ||||||| |||||||| ||||| ||||||| | || || |||||||| Sbjct: 30496626 cttggtcatcacctccaccgccgccttgctcgccgcgtacgccgcgtaccccggccggag 30496567 Query: 400 cgaccccacgttcgacgacgag 421 |||||| ||| |||||||||| Sbjct: 30496566 cgacccgacgcccgacgacgag 30496545
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 340 cttggtcatcgcctccacggccgccttcgtcgccacgtacgcgccatagcctggccggag 399 |||||||||| ||||||| |||||||| ||||| ||||||| | || || |||||||| Sbjct: 28199 cttggtcatcacctccaccgccgccttgctcgccgcgtacgccgcgtaccccggccggag 28140 Query: 400 cgaccccacgttcgacgacgag 421 |||||| ||| |||||||||| Sbjct: 28139 cgacccgacgcccgacgacgag 28118
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 340 cttggtcatcgcctccacggccgccttcgtcgccacgtacgcgccatagcctggccggag 399 |||||||||| ||||||| |||||||| ||||| ||||||| | || || |||||||| Sbjct: 30588048 cttggtcatcacctccaccgccgccttgctcgccgcgtacgccgcgtaccccggccggag 30587989 Query: 400 cgaccccacgttcgacgacgag 421 |||||| ||| |||||||||| Sbjct: 30587988 cgacccgacgcccgacgacgag 30587967
>dbj|AK108283.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-D03, full insert sequence Length = 1022 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 340 cttggtcatcgcctccacggccgccttcgtcgccacgtacgcgccatagcctggccggag 399 |||||||||| ||||||| |||||||| ||||| ||||||| | || || |||||||| Sbjct: 665 cttggtcatcacctccaccgccgccttgctcgccgcgtacgccgcgtaccccggccggag 606 Query: 400 cgaccccacgttcgacgacgag 421 |||||| ||| |||||||||| Sbjct: 605 cgacccgacgcccgacgacgag 584
>ref|XM_476748.1| Oryza sativa (japonica cultivar-group), mRNA Length = 786 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 113 ttgacccgaatcacctggccgttaatccacccggcggcgtcaccacagagaaagccgacc 172 ||||| ||||||||||||||||| | |||| |||||||||| ||||| ||||||||| Sbjct: 770 ttgactcgaatcacctggccgttgacccactcggcggcgtcggtgcagaggaagccgacc 711 Query: 173 accgg 177 ||||| Sbjct: 710 accgg 706
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 113 ttgacccgaatcacctggccgttaatccacccggcggcgtcaccacagagaaagccgacc 172 ||||| ||||||||||||||||| | |||| |||||||||| ||||| ||||||||| Sbjct: 3744831 ttgactcgaatcacctggccgttgacccactcggcggcgtcggtgcagaggaagccgacc 3744772 Query: 173 accgg 177 ||||| Sbjct: 3744771 accgg 3744767 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 99 acacgtaaccaccgttgacccgaatcacctggccgttaatccacccggcggcgtc 153 ||||||| || ||||||||||| || ||||||||||| | |||| |||||||||| Sbjct: 22363512 acacgtacccgccgttgacccggatgacctggccgttgacccactcggcggcgtc 22363458 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 346 catcgcctccacggccgccttcgtcgccacgtacgcg 382 ||||||||||||||||||||||| |||| ||||||| Sbjct: 22363265 catcgcctccacggccgccttcgacgccgtgtacgcg 22363229 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 ccccggcgccacgctgttggccgtgatgc 311 ||||||||| |||| |||||||||||||| Sbjct: 22363328 ccccggcgcgacgcagttggccgtgatgc 22363300 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 101 acgtaaccaccgttgacccgaatcacctggccgttaatccacccggcggcgtc 153 ||||| || |||||||| || || ||||||||||| ||||| |||||||||| Sbjct: 3745454 acgtagccgccgttgacacgtatgacctggccgttggtccactcggcggcgtc 3745506
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 113 ttgacccgaatcacctggccgttaatccacccggcggcgtcaccacagagaaagccgacc 172 ||||| ||||||||||||||||| | |||| |||||||||| ||||| ||||||||| Sbjct: 89182 ttgactcgaatcacctggccgttgacccactcggcggcgtcggtgcagaggaagccgacc 89123 Query: 173 accgg 177 ||||| Sbjct: 89122 accgg 89118 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 101 acgtaaccaccgttgacccgaatcacctggccgttaatccacccggcggcgtc 153 ||||| || |||||||| || || ||||||||||| ||||| |||||||||| Sbjct: 89805 acgtagccgccgttgacacgtatgacctggccgttggtccactcggcggcgtc 89857
>ref|XM_478715.1| Oryza sativa (japonica cultivar-group), mRNA Length = 798 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 99 acacgtaaccaccgttgacccgaatcacctggccgttaatccacccggcggcgtc 153 ||||||| || ||||||||||| || ||||||||||| | |||| |||||||||| Sbjct: 796 acacgtacccgccgttgacccggatgacctggccgttgacccactcggcggcgtc 742 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 346 catcgcctccacggccgccttcgtcgccacgtacgcg 382 ||||||||||||||||||||||| |||| ||||||| Sbjct: 549 catcgcctccacggccgccttcgacgccgtgtacgcg 513 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 ccccggcgccacgctgttggccgtgatgc 311 ||||||||| |||| |||||||||||||| Sbjct: 612 ccccggcgcgacgcagttggccgtgatgc 584
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 99 acacgtaaccaccgttgacccgaatcacctggccgttaatccacccggcggcgtc 153 ||||||| || ||||||||||| || ||||||||||| | |||| |||||||||| Sbjct: 168758 acacgtacccgccgttgacccggatgacctggccgttgacccactcggcggcgtc 168704 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 346 catcgcctccacggccgccttcgtcgccacgtacgcg 382 ||||||||||||||||||||||| |||| ||||||| Sbjct: 168511 catcgcctccacggccgccttcgacgccgtgtacgcg 168475 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 ccccggcgccacgctgttggccgtgatgc 311 ||||||||| |||| |||||||||||||| Sbjct: 168574 ccccggcgcgacgcagttggccgtgatgc 168546
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 99 acacgtaaccaccgttgacccgaatcacctggccgttaatccacccggcggcgtc 153 ||||||| || ||||||||||| || ||||||||||| | |||| |||||||||| Sbjct: 24579 acacgtacccgccgttgacccggatgacctggccgttgacccactcggcggcgtc 24525 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 346 catcgcctccacggccgccttcgtcgccacgtacgcg 382 ||||||||||||||||||||||| |||| ||||||| Sbjct: 24332 catcgcctccacggccgccttcgacgccgtgtacgcg 24296 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 ccccggcgccacgctgttggccgtgatgc 311 ||||||||| |||| |||||||||||||| Sbjct: 24395 ccccggcgcgacgcagttggccgtgatgc 24367
>gb|AE005903.1| Caulobacter crescentus CB15 section 229 of 359 of the complete genome Length = 11684 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 273 tggcgaccggccccggcgccacg 295 ||||||||||||||||||||||| Sbjct: 9869 tggcgaccggccccggcgccacg 9891
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 343 ggtcatcgcctccacggccgccttcg 368 ||||||||| |||||||||||||||| Sbjct: 1004067 ggtcatcgcttccacggccgccttcg 1004042 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 282 gccccggcgccacgctgttggccgtgat 309 ||||||||||||||| |||| ||||||| Sbjct: 841860 gccccggcgccacgcagttgaccgtgat 841833
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 atcgcctccacggccgccttcg 368 |||||||||||||||||||||| Sbjct: 854306 atcgcctccacggccgccttcg 854327
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 280 cggccccggcgccacgctgttg 301 |||||||||||||||||||||| Sbjct: 3286018 cggccccggcgccacgctgttg 3285997
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 accggccccggcgccacgctg 298 ||||||||||||||||||||| Sbjct: 602785 accggccccggcgccacgctg 602805
>ref|XM_476749.1| Oryza sativa (japonica cultivar-group), mRNA Length = 798 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 101 acgtaaccaccgttgacccgaatcacctggccgttaatccacccggcggcgtc 153 ||||| || |||||||| || || ||||||||||| ||||| |||||||||| Sbjct: 791 acgtagccgccgttgacacgtatgacctggccgttggtccactcggcggcgtc 739
>gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynthetic gene cluster, complete sequence Length = 49461 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 ggcgagctccttggccagcac 339 ||||||||||||||||||||| Sbjct: 17352 ggcgagctccttggccagcac 17372
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 cggcgagctccttggccagcacctt 342 |||||||||||||||||||| |||| Sbjct: 6483473 cggcgagctccttggccagcgcctt 6483497 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 cgagctccttggccagcacct 341 ||||||||||||||||||||| Sbjct: 964439 cgagctccttggccagcacct 964459
>dbj|AK110469.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-G12, full insert sequence Length = 3020 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 cggcgagctccttggccagca 338 ||||||||||||||||||||| Sbjct: 2583 cggcgagctccttggccagca 2563
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 179 gccacgtccgccggctcgccgatgcgctt 207 ||||| ||| ||||||||||||||||||| Sbjct: 2964840 gccacctcctccggctcgccgatgcgctt 2964868
>ref|NM_193622.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1104 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ttcgtcgccacgtacgcgcc 384 |||||||||||||||||||| Sbjct: 978 ttcgtcgccacgtacgcgcc 959
>gb|AF003137.1| Caenorhabditis elegans cosmid C27A12, complete sequence Length = 31531 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ataacttttattaaacccga 28 |||||||||||||||||||| Sbjct: 21943 ataacttttattaaacccga 21924
>emb|CR680878.1|CNS0FOBE Tetraodon nigroviridis full-length cDNA Length = 1525 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ctccttggccagcaccttgg 344 |||||||||||||||||||| Sbjct: 198 ctccttggccagcaccttgg 179
>emb|BX548154.1|CNS09SBK clone A24K23, A41I8 of Tetraodon nigroviridis Length = 265677 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 acgcgctcctcggacttccc 255 |||||||||||||||||||| Sbjct: 44909 acgcgctcctcggacttccc 44928
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 gtggcgaccggccccggcgccacg 295 ||||| |||||||||||||||||| Sbjct: 293230 gtggccaccggccccggcgccacg 293253
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 cagcaccttggtcatcgcct 353 |||||||||||||||||||| Sbjct: 276831 cagcaccttggtcatcgcct 276812
>emb|BX572609.1|CNS09SBP Tetraodon nigroviridis BAC sequence Length = 265677 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 acgcgctcctcggacttccc 255 |||||||||||||||||||| Sbjct: 44909 acgcgctcctcggacttccc 44928
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ttcgtcgccacgtacgcgcc 384 |||||||||||||||||||| Sbjct: 22189012 ttcgtcgccacgtacgcgcc 22189031
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 agcctggccggagcgacccc 406 |||||||||||||||||||| Sbjct: 463864 agcctggccggagcgacccc 463845
>dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1112D09 Length = 125920 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 ttcgtcgccacgtacgcgcc 384 |||||||||||||||||||| Sbjct: 84498 ttcgtcgccacgtacgcgcc 84517
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ccggcgccacgtccgccggc 193 |||||||||||||||||||| Sbjct: 2030584 ccggcgccacgtccgccggc 2030603 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ctccttggccagcaccttgg 344 |||||||||||||||||||| Sbjct: 1341871 ctccttggccagcaccttgg 1341852
>gb|AY103687.1| Zea mays PCO106710 mRNA sequence Length = 1242 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 cctccacggccgccttcgtcgcca 374 |||||||||||||||||| ||||| Sbjct: 119 cctccacggccgccttcgccgcca 142
>gb|AY104176.1| Zea mays PCO083783 mRNA sequence Length = 1312 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 cgcctccacggccgccttcg 368 |||||||||||||||||||| Sbjct: 455 cgcctccacggccgccttcg 436 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,584,415 Number of Sequences: 3902068 Number of extensions: 2584415 Number of successful extensions: 51129 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49910 Number of HSP's gapped (non-prelim): 1212 length of query: 421 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 399 effective length of database: 17,147,199,772 effective search space: 6841732709028 effective search space used: 6841732709028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)