ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart38f06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009005.1| Triticum aestivum clone wdk2c.pk018.g2:fis, full insert mRNA sequence Length = 1782 Score = 212 bits (107), Expect = 8e-52 Identities = 178/202 (88%), Gaps = 6/202 (2%) Strand = Plus / Minus Query: 284 caccatggcgacgaggctcctccatccggcgccgacggctgcggccgcaccggcgggcgg 343 ||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 818 caccacggcgacgaggctcctccagccggcgccgacggctgcggcggctccggcgggcgg 759 Query: 344 ggttgtctcgtcgtcctcgtcctcgtccgaccccgagggcgccttggctgcccccttggc 403 || ||| ||||||||||| ||| |||||||| |||||||||||||||||||| Sbjct: 758 ggcctcctcctcgtcctcgtcgtcg------cccgagggggccttggctgcccccttggc 705 Query: 404 ggaggagggcttctttcccggggccagcggcgcggacgccggcggcttggggccgaagag 463 || ||||||||||| || |||||| | |||||||| ||||||||||||||||||||||| Sbjct: 704 cgacgagggcttcttgccgggggccgggggcgcggaggccggcggcttggggccgaagag 645 Query: 464 gtccatgggcagcagcaccttg 485 |||||||||||||||||||||| Sbjct: 644 gtccatgggcagcagcaccttg 623 Score = 87.7 bits (44), Expect = 3e-14 Identities = 63/69 (91%), Gaps = 4/69 (5%) Strand = Plus / Minus Query: 142 tagtaacctatccaaatccatgcacagcatgcacgcacgcagctagtctccatcgatccg 201 |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| | Sbjct: 949 tagtaacctatccaaatccatgcacaacat----gcacgcagctagtctccatcgatctg 894 Query: 202 tcggtctca 210 ||||||||| Sbjct: 893 tcggtctca 885 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 241 tttcttcttcttacaagaggcac 263 ||||||||||||||||||||||| Sbjct: 861 tttcttcttcttacaagaggcac 839 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ttttttcaacagtggaacatc 23 ||||||||||||||||||||| Sbjct: 1071 ttttttcaacagtggaacatc 1051
>ref|XM_480123.1| Oryza sativa (japonica cultivar-group), mRNA Length = 678 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtccgac 374 ||||||||||||||||||||||||| Sbjct: 426 ctcgtcgtcctcgtcctcgtccgac 402
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtccgac 374 ||||||||||||||||||||||||| Sbjct: 2962270 ctcgtcgtcctcgtcctcgtccgac 2962294 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 23863033 tcgtcgtcctcgtcctcgtcc 23863053 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gtcgtcctcgtcctcgtccg 372 |||||||||||||||||||| Sbjct: 1143706 gtcgtcctcgtcctcgtccg 1143725
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtccgac 374 ||||||||||||||||||||||||| Sbjct: 135332 ctcgtcgtcctcgtcctcgtccgac 135356
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtccgac 374 ||||||||||||||||||||||||| Sbjct: 12993 ctcgtcgtcctcgtcctcgtccgac 13017
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 430 gcggcgcggacgccggcggcttggggccgaa 460 |||||| ||||| |||||||||||||||||| Sbjct: 58076 gcggcggggacggcggcggcttggggccgaa 58046
>gb|AF470060.1| Sorghum bicolor P-type R2R3 Myb protein (Myb23) gene, partial cds Length = 2028 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 349 tctcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||||| Sbjct: 929 tctcgtcgtcctcgtcctcgtcc 907
>emb|Y14276.1|SCSIG1 Sorghum bicolor mRNA for plastid RNA polymerase sigma factor Length = 1886 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 349 tctcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||||| Sbjct: 645 tctcgtcgtcctcgtcctcgtcc 623
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 430 gcggcgcggacgccggcggcttggggccgaa 460 |||||| ||||| |||||||||||||||||| Sbjct: 27827659 gcggcggggacggcggcggcttggggccgaa 27827629
>gb|BT018218.1| Zea mays clone EL01N0561B10.c mRNA sequence Length = 670 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 337 ctcgtcgtcctcgtcctcgtcc 358
>ref|XM_362225.1| Magnaporthe grisea 70-15 predicted protein (MG04670.4) partial cds Length = 681 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 267 ctcgtcgtcctcgtcctcgtcc 246
>gb|AC006357.5| Homo sapiens PAC clone RP5-1121A15 from 7, complete sequence Length = 130492 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 21346 ctcgtcgtcctcgtcctcgtcc 21325
>ref|XM_861216.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 8 (LOC484478), mRNA Length = 1817 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 1616 ctcgtcgtcctcgtcctcgtcc 1637
>ref|XM_861199.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 7 (LOC484478), mRNA Length = 1736 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 1499 ctcgtcgtcctcgtcctcgtcc 1520
>ref|XM_861184.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 6 (LOC484478), mRNA Length = 1695 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 1583 ctcgtcgtcctcgtcctcgtcc 1604
>ref|XM_861169.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 5 (LOC484478), mRNA Length = 1752 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 1640 ctcgtcgtcctcgtcctcgtcc 1661
>ref|XM_861153.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 4 (LOC484478), mRNA Length = 1719 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 1607 ctcgtcgtcctcgtcctcgtcc 1628
>ref|XM_861140.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 3 (LOC484478), mRNA Length = 1713 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 1601 ctcgtcgtcctcgtcctcgtcc 1622
>ref|XM_847636.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 2 (LOC484478), mRNA Length = 1932 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 1664 ctcgtcgtcctcgtcctcgtcc 1685
>ref|XM_541592.2| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 1 (LOC484478), mRNA Length = 2285 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 2154 ctcgtcgtcctcgtcctcgtcc 2175
>emb|X56537.1|HSF9HMEO Human novel homeobox mRNA for a DNA binding protein Length = 1254 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 605 ctcgtcgtcctcgtcctcgtcc 584
>gb|U07664.1|HSHB9HB2 Homo sapiens HB9 homeobox gene, exons 2 and 3 and complete cds Length = 3484 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 2205 ctcgtcgtcctcgtcctcgtcc 2184
>emb|CR623223.1| full-length cDNA clone CL0BB009ZA03 of Neuroblastoma of Homo sapiens (human) Length = 2029 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 1269 ctcgtcgtcctcgtcctcgtcc 1248
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 318 acggctgcggccgcaccggcgg 339 |||||||||||||||||||||| Sbjct: 1323213 acggctgcggccgcaccggcgg 1323192
>ref|NM_005515.3| Homo sapiens homeobox HB9 (HLXB9), mRNA Length = 2176 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 1398 ctcgtcgtcctcgtcctcgtcc 1377
>dbj|AK169543.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630089N23 product:sperm specific antigen 2, full insert sequence Length = 5270 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 278 ctcgtcgtcctcgtcctcgtcc 257
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 605904 ctcgtcgtcctcgtcctcgtcc 605883 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 123199 ctcgtcgtcctcgtcctcgtc 123179
>gb|AF107457.1|AF107457 Homo sapiens clone HB9 mRNA sequence Length = 2061 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 1282 ctcgtcgtcctcgtcctcgtcc 1261
>gb|AC147215.4| Pan troglodytes BAC clone RP43-141N5 from chromosome 7, complete sequence Length = 179309 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 35994 ctcgtcgtcctcgtcctcgtcc 36015
>ref|XM_230036.3| PREDICTED: Rattus norvegicus sperm specific antigen 2 (predicted) (Ssfa2_predicted), mRNA Length = 4848 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 1068 ctcgtcgtcctcgtcctcgtcc 1047
>dbj|AB120565.1| Mus musculus mRNA for KRAP, complete cds Length = 3759 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 162 ctcgtcgtcctcgtcctcgtcc 141
>ref|NM_211672.1| Eremothecium gossypii AGL056Wp (AGL056W), mRNA Length = 1191 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 681 ctcgtcgtcctcgtcctcgtcc 660
>gb|AF107453.1|HSHB9G2 Homo sapiens homeotic protein HB9 gene, exons 2 and 3 and partial cds Length = 1979 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 1089 ctcgtcgtcctcgtcctcgtcc 1068
>dbj|AB093303.1| Mus musculus mRNA for mKIAA1927 protein Length = 4966 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 152 ctcgtcgtcctcgtcctcgtcc 131
>ref|NM_080558.3| Mus musculus sperm specific antigen 2 (Ssfa2), mRNA Length = 3759 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 162 ctcgtcgtcctcgtcctcgtcc 141
>emb|AL928770.1| Mouse DNA sequence from clone RP23-20E18 on chromosome 2, complete sequence Length = 87095 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||||| Sbjct: 84220 ctcgtcgtcctcgtcctcgtcc 84199
>ref|XM_525340.1| PREDICTED: Pan troglodytes LOC469956 (LOC469956), mRNA Length = 1677 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 789 ctcgtcgtcctcgtcctcgtc 769
>ref|XM_483012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1120 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 708 tcgtcgtcctcgtcctcgtcc 688
>ref|NM_152897.1| Homo sapiens chromosome 20 open reading frame 161 (C20orf161), transcript variant 2, mRNA Length = 1921 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 323 ctcgtcgtcctcgtcctcgtc 303
>ref|NM_033421.2| Homo sapiens chromosome 20 open reading frame 161 (C20orf161), transcript variant 1, mRNA Length = 3173 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 323 ctcgtcgtcctcgtcctcgtc 303
>ref|XM_430347.1| PREDICTED: Gallus gallus hypothetical gene supported by BX931485 (LOC425988), partial mRNA Length = 539 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 473 tcgtcgtcctcgtcctcgtcc 453
>ref|XM_365395.1| Magnaporthe grisea 70-15 hypothetical protein (MG02097.4) partial mRNA Length = 2472 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 2240 tcgtcgtcctcgtcctcgtcc 2220
>ref|XM_954367.1| Neurospora crassa OR74A hypothetical protein (NCU05902.1) partial mRNA Length = 4080 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 269 tcgtcgtcctcgtcctcgtcc 249
>ref|XM_325756.1| Neurospora crassa OR74A hypothetical protein (NCU05902.1) partial mRNA Length = 4080 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 269 tcgtcgtcctcgtcctcgtcc 249
>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0480H08, complete sequence Length = 156301 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 63064 ctcgtcgtcctcgtcctcgtc 63084
>gb|AY665713.1| Equine herpesvirus 1 strain Ab4, complete genome Length = 150224 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 145124 tcgtcgtcctcgtcctcgtcc 145144 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 118036 tcgtcgtcctcgtcctcgtcc 118016
>gb|AY268055.1| Lontra canadensis clone otter b8 microsatellite RIO 05 sequence Length = 428 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 355 tcgtcgtcctcgtcctcgtcc 335
>ref|XM_542545.2| PREDICTED: Canis familiaris similar to potassium voltage-gated channel, shaker-related subfamily, member 4 (LOC485427), mRNA Length = 2001 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 432 ctcgtcgtcctcgtcctcgtc 412
>ref|XM_757366.1| Ustilago maydis 521 hypothetical protein (UM06312.1) partial mRNA Length = 3435 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 1583 tcgtcgtcctcgtcctcgtcc 1563
>gb|BC012904.1| Homo sapiens chromosome 20 open reading frame 161, mRNA (cDNA clone IMAGE:3864564), containing frame-shift errors Length = 1868 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 323 ctcgtcgtcctcgtcctcgtc 303
>emb|AL008726.3|HS337O18 Human DNA sequence from clone RP3-337O18 on chromosome 20q12-13.1 Contains the PLPT gene for phospholipid transfer protein, the PPGB gene for protective protein for beta-galactosidase (galactosialidosis), the PTE1 gene for peroxisomal acyl-CoA thioesterase, the C20orf161 gene, the C20orf162 gene, the C20orf163, the C20orf164 gene, the C20orf165 gene, the 5' end of an variant of the TNNC2 gene for fast troponin C2 and three CpG islands, complete sequence Length = 86080 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 6809 ctcgtcgtcctcgtcctcgtc 6789
>gb|AY464052.1| Equine herpesvirus 1 strain V592, complete genome Length = 149430 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 144574 tcgtcgtcctcgtcctcgtcc 144594 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 117743 tcgtcgtcctcgtcctcgtcc 117723
>ref|XM_781851.1| PREDICTED: Strongylocentrotus purpuratus similar to CG31439-PA (LOC581873), mRNA Length = 11769 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 11090 tcgtcgtcctcgtcctcgtcc 11110
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 251254 tcgtcgtcctcgtcctcgtcc 251274
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtccgaccccg 378 |||||| |||||||||||||||| ||||| Sbjct: 3907 ctcgtcctcctcgtcctcgtccgcccccg 3935
>dbj|AK095851.1| Homo sapiens cDNA FLJ38532 fis, clone HCHON2001099 Length = 3044 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 204 ctcgtcgtcctcgtcctcgtc 184
>emb|CR617424.1| full-length cDNA clone CS0DI036YC23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 207 ctcgtcgtcctcgtcctcgtc 187
>emb|CR601928.1| full-length cDNA clone CS0DB001YB03 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1550 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 271 ctcgtcgtcctcgtcctcgtc 251
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 130345 tcgtcgtcctcgtcctcgtcc 130325
>gb|AC175201.2| Sporobolomyces roseus clone JGIBAIF-33D23, complete sequence Length = 42507 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 14032 ctcgtcgtcctcgtcctcgtc 14012
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 2561598 tcgtcgtcctcgtcctcgtcc 2561578
>gb|AF395845.1|AF395845 Homo sapiens SNX21 (SNX21) mRNA, complete cds Length = 1122 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 234 ctcgtcgtcctcgtcctcgtc 214
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 3430639 ctcgtcgtcctcgtcctcgtc 3430619
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 24194363 ctcgtcgtcctcgtcctcgtc 24194383
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 21305592 ctcgtcgtcctcgtcctcgtc 21305612
>ref|NM_001011629.1| Apis mellifera putative transcription factor mblk-1 (Mblk-1), mRNA Length = 14440 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 88 tcgtcgtcctcgtcctcgtcc 68
>dbj|AB182650.1| Equid herpesvirus 1 ICP4 gene for IE, complete cds Length = 5434 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 4879 tcgtcgtcctcgtcctcgtcc 4859
>gb|AF090447.2| Zea mays 22 kDa alpha zein gene cluster, complete sequence Length = 346296 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 36155 tcgtcgtcctcgtcctcgtcc 36175
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 5072576 ctcgtcgtcctcgtcctcgtc 5072556 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 cgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||| Sbjct: 4160841 cgtcgtcctcgtcctcgtcc 4160860
>gb|AF523834.1| Homo sapiens sorting nexin protein family member 21 mRNA, complete cds Length = 1600 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 302 ctcgtcgtcctcgtcctcgtc 282
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_H02 Length = 108603 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 54737 tcgtcgtcctcgtcctcgtcc 54757
>dbj|AB158520.1| Equine herpesvirus 1 ORF64 gene for transcriptional activator, complete cds Length = 4461 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 556 tcgtcgtcctcgtcctcgtcc 576
>dbj|AK099821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101A13, full insert sequence Length = 1120 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 708 tcgtcgtcctcgtcctcgtcc 688
>ref|NM_211422.1| Eremothecium gossypii AGL307Wp (AGL307W), mRNA Length = 972 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 264 ctcgtcgtcctcgtcctcgtc 244
>emb|AL591562.1|HS337O184 Novel human gene mapping to chomosome 20 Length = 1600 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 302 ctcgtcgtcctcgtcctcgtc 282
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 400 tggcggaggagggcttctttcccgg 424 ||||||||| ||||||||||||||| Sbjct: 226182 tggcggaggcgggcttctttcccgg 226158
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 21615791 ctcgtcgtcctcgtcctcgtc 21615811
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 24122569 ctcgtcgtcctcgtcctcgtc 24122589
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 79054 ctcgtcgtcctcgtcctcgtc 79074
>gb|BC019823.1| Homo sapiens chromosome 20 open reading frame 161, mRNA (cDNA clone MGC:29895 IMAGE:4453502), complete cds Length = 1560 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtc 370 ||||||||||||||||||||| Sbjct: 296 ctcgtcgtcctcgtcctcgtc 276
>gb|AY740083.1| Ostreococcus tauri ZTL/AFR-like protein gene, complete cds Length = 1452 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 421 tcgtcgtcctcgtcctcgtcc 401
>gb|J04366.1|HSEIEP Equine herpesvirus type 1 immediate-early protein gene, complete cds Length = 8174 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 1543 tcgtcgtcctcgtcctcgtcc 1563
>dbj|AB047034.1| Apis mellifera mblk-1 mRNA, complete cds Length = 14440 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||||||| Sbjct: 88 tcgtcgtcctcgtcctcgtcc 68
>gb|AC154050.1| Drosophila melanogaster clone BACR22M24, complete sequence Length = 161653 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 132085 tcgtcgtcctcgtcctcgtc 132104
>ref|XM_479831.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1613 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gtcgtcctcgtcctcgtccg 372 |||||||||||||||||||| Sbjct: 1109 gtcgtcctcgtcctcgtccg 1128
>ref|XM_468447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1719 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||| Sbjct: 232 cgtcgtcctcgtcctcgtcc 213
>ref|XM_478901.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2059 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 234 tcgtcgtcctcgtcctcgtc 215
>gb|BT017762.1| Zea mays clone EL01N0501F08.c mRNA sequence Length = 1235 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 260 tcgtcgtcctcgtcctcgtc 241
>gb|AY758272.1| Gallus gallus microsatellite NLRIC0003 sequence Length = 371 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 135 tcgtcgtcctcgtcctcgtc 154
>gb|U51997.1| Caenorhabditis elegans cosmid F19G12, complete sequence Length = 28537 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gcttgaattttcttcttctt 252 |||||||||||||||||||| Sbjct: 27527 gcttgaattttcttcttctt 27546
>gb|AC168275.4| Mus musculus 10 BAC RP23-350O21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188458 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agccagcaagaagtagtagt 145 |||||||||||||||||||| Sbjct: 83749 agccagcaagaagtagtagt 83768
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 gcgcggacgccggcggcttg 452 |||||||||||||||||||| Sbjct: 1874787 gcgcggacgccggcggcttg 1874768
>ref|XM_424102.1| PREDICTED: Gallus gallus similar to oxidative stress responsive 1 (LOC426458), mRNA Length = 1349 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 521 tcgtcgtcctcgtcctcgtc 502
>ref|XM_868822.1| PREDICTED: Bos taurus hypothetical protein LOC616725 (LOC616725), mRNA Length = 522 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 tcgtcctcgtcctcgtccga 373 |||||||||||||||||||| Sbjct: 77 tcgtcctcgtcctcgtccga 58
>gb|AY524544.1| Streptomyces chrysomallus ectoine biosynthesis gene cluster, complete sequence Length = 3366 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ggctgcggccgcaccggcgg 339 |||||||||||||||||||| Sbjct: 1436 ggctgcggccgcaccggcgg 1455
>gb|AY273869.1| Pseudomonas aeruginosa PA14 pathogenicity island PAPI-1, complete sequence Length = 111332 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 10406 tcgtcgtcctcgtcctcgtc 10425
>gb|AC006330.5| Homo sapiens BAC clone RP11-229D13 from 7, complete sequence Length = 96299 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 cagcttgaattttcttcttc 250 |||||||||||||||||||| Sbjct: 55547 cagcttgaattttcttcttc 55566
>ref|XM_850011.1| PREDICTED: Canis familiaris similar to RING finger and KH domain containing protein 1 (LOC612270), mRNA Length = 1656 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 1429 tcgtcgtcctcgtcctcgtc 1448
>ref|XM_542197.2| PREDICTED: Canis familiaris similar to Transcription factor E2-alpha (Immunoglobulin enhancer binding factor E12/E47) (Transcription factor-3) (TCF-3) (Immunoglobulin transcription factor-1) (Transcription factor ITF-1) (Kappa-E2-binding factor) (LOC485079), mRNA Length = 1899 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gtcgtcctcgtcctcgtccg 372 |||||||||||||||||||| Sbjct: 1542 gtcgtcctcgtcctcgtccg 1523
>emb|CT025527.7| Mouse DNA sequence from clone RP23-279J20 on chromosome 16, complete sequence Length = 202976 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 136197 tcgtcgtcctcgtcctcgtc 136178
>emb|X14112.1|HE1CG Human herpesvirus 1 complete genome Length = 152261 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 147721 tcgtcgtcctcgtcctcgtc 147702 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 130512 tcgtcgtcctcgtcctcgtc 130531
>gb|BC107561.1| Rattus norvegicus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3, mRNA (cDNA clone MGC:124855 IMAGE:7937018), complete cds Length = 3001 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gtctcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||| |||||| Sbjct: 537 gtctcgtcgtcctcgtcttcgtcc 514
>emb|AL132848.1|CEY47H10A Caenorhabditis elegans YAC Y47H10A, complete sequence Length = 31521 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gcttgaattttcttcttctt 252 |||||||||||||||||||| Sbjct: 5090 gcttgaattttcttcttctt 5109
>gb|AC122341.3| Mus musculus BAC clone RP23-355F8 from chromosome 15, complete sequence Length = 198612 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 tagtaacctatccaaatcca 161 |||||||||||||||||||| Sbjct: 46161 tagtaacctatccaaatcca 46142
>emb|BX537348.8| Zebrafish DNA sequence from clone CH211-218O21 in linkage group 8, complete sequence Length = 207282 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 ggcggaggagggcttctttc 420 |||||||||||||||||||| Sbjct: 102813 ggcggaggagggcttctttc 102794
>ref|NM_001037202.1| Rattus norvegicus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 (Plekhh3), mRNA Length = 3001 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gtctcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||| |||||| Sbjct: 537 gtctcgtcgtcctcgtcttcgtcc 514
>emb|CR636876.2|CNS0EQDU Tetraodon nigroviridis full-length cDNA Length = 1630 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 tcgtcctcgtcctcgtccga 373 |||||||||||||||||||| Sbjct: 25 tcgtcctcgtcctcgtccga 6
>gb|AC160638.6| Mus musculus BAC clone RP23-99K6 from chromosome 15, complete sequence Length = 218870 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 tagtaacctatccaaatcca 161 |||||||||||||||||||| Sbjct: 173562 tagtaacctatccaaatcca 173543
>gb|AF543417.1| Zea mays major facilitator superfamily antiporter (mfs2) mRNA, complete cds Length = 1629 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 157 atccatgcacagcatgcacgcacgcagc 184 ||||||||| |||| ||||||||||||| Sbjct: 1404 atccatgcagagcacgcacgcacgcagc 1377
>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the 3' end of the PEX14 gene for peroxisomal biogenesis factor 14, the 3' end of the gene for a novel protein (FLJ34970, FLJ20321, FLJ12223) and two CpG islands, complete sequence Length = 143285 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 47711 tcgtcgtcctcgtcctcgtc 47730
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 cagcggcgcggacgccggcggctt 451 ||||||||||||| |||||||||| Sbjct: 222963 cagcggcgcggacaccggcggctt 222940
>emb|X81888.1|MPNARA2S M.persicae mRNA for nicotinic acetylcholine receptor alpha 2 subunit Length = 2339 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgtcctcgtcctcgtccgac 374 |||||||||||||||||||| Sbjct: 1393 cgtcctcgtcctcgtccgac 1374
>emb|X15078.1|HCRPLCLU Halobium cutirubrum L11, L1, L10 and L12 equivalent ribosomal protein gene cluster Length = 5146 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 tcccggggccagcggcgcgg 438 |||||||||||||||||||| Sbjct: 4650 tcccggggccagcggcgcgg 4631
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cgacggctgcggccgcaccg 335 |||||||||||||||||||| Sbjct: 1729844 cgacggctgcggccgcaccg 1729825
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 205718 tcgtcgtcctcgtcctcgtc 205737
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 4616 tcgtcgtcctcgtcctcgtc 4635
>emb|AJ292755.1|AGA292755 Anopheles gambiae mRNA for integrin beta subunit (bint gene) Length = 4179 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgt 369 |||||||||||||||||||| Sbjct: 501 ctcgtcgtcctcgtcctcgt 520
>gb|AC010664.7| Drosophila melanogaster 3L BAC RP98-2G4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 155615 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 138373 tcgtcgtcctcgtcctcgtc 138354
>gb|AC112727.4| Drosophila melanogaster 3L BAC RP98-15L14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 157739 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 123903 tcgtcgtcctcgtcctcgtc 123884
>gb|AE005722.1| Caulobacter crescentus CB15 section 48 of 359 of the complete genome Length = 12112 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 gcggcgcggacgccggcggc 449 |||||||||||||||||||| Sbjct: 1258 gcggcgcggacgccggcggc 1239
>tpg|BK003497.1| TPA: TPA_inf: Drosophila melanogaster HDC02776 (HDC02776) gene, complete cds Length = 276 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 cgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||| Sbjct: 114 cgtcgtcctcgtcctcgtcc 133
>gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete genome Length = 135611 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 135237 tcgtcgtcctcgtcctcgtc 135256
>gb|AC113165.1| Homo sapiens chromosome 5 clone RP11-213E1, complete sequence Length = 140640 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 ctcccagcttgaattttctt 246 |||||||||||||||||||| Sbjct: 6124 ctcccagcttgaattttctt 6105
>gb|AC104119.2| Homo sapiens chromosome 5 clone RP11-34D23, complete sequence Length = 168108 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ctcccagcttgaattttctt 246 |||||||||||||||||||| Sbjct: 44528 ctcccagcttgaattttctt 44547
>gb|AF372498.1|AF372498 Glycine max GT-2 factor mRNA, partial cds Length = 1279 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 1017 tcgtcgtcctcgtcctcgtc 998
>dbj|AK154510.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630041G20 product:hypothetical Core domain in kinesin and myosin motor/Pleckstrin-like/Band 4.1/PH domain profile/FERM domain profile/Proline-rich region profile/Ras-associating (RA) domain profile/Pleckstrin-homology-related/FERM/Peptidase S1, chymotrypsin containing protein, full insert sequence Length = 3010 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gtctcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||| |||||| Sbjct: 554 gtctcgtcgtcctcgtcttcgtcc 531
>gb|AC021639.5| Drosophila melanogaster, chromosome X, region 12E-12E, BAC clone BACR02C24, complete sequence Length = 234783 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 102953 tcgtcgtcctcgtcctcgtc 102934
>dbj|AK164128.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530042D12 product:hypothetical Band 4.1/FERM domain profile/Proline-rich region profile/Ras-associating (RA) domain profile/FERM containing protein, full insert sequence Length = 3016 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gtctcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||| |||||| Sbjct: 554 gtctcgtcgtcctcgtcttcgtcc 531
>gb|BC020025.1| Mus musculus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3, mRNA (cDNA clone MGC:27854 IMAGE:3490992), complete cds Length = 3020 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gtctcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||| |||||| Sbjct: 538 gtctcgtcgtcctcgtcttcgtcc 515
>ref|NM_146030.1| Mus musculus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 (Plekhh3), mRNA Length = 3020 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gtctcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||| |||||| Sbjct: 538 gtctcgtcgtcctcgtcttcgtcc 515
>ref|XM_704687.1| PREDICTED: Danio rerio hypothetical protein LOC553406, transcript variant 2 (LOC553406), mRNA Length = 5737 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 ggcggaggagggcttctttc 420 |||||||||||||||||||| Sbjct: 3835 ggcggaggagggcttctttc 3816
>ref|XM_704688.1| PREDICTED: Danio rerio hypothetical protein LOC553406, transcript variant 3 (LOC553406), mRNA Length = 5731 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 ggcggaggagggcttctttc 420 |||||||||||||||||||| Sbjct: 3829 ggcggaggagggcttctttc 3810
>ref|XM_678828.1| PREDICTED: Danio rerio hypothetical protein LOC553406, transcript variant 1 (LOC553406), mRNA Length = 5848 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 ggcggaggagggcttctttc 420 |||||||||||||||||||| Sbjct: 3829 ggcggaggagggcttctttc 3810
>gb|AC092400.1|AC092400 Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR39L06, complete sequence Length = 178953 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||| Sbjct: 55048 cgtcgtcctcgtcctcgtcc 55029
>gb|AC092396.1|AC092396 Drosophila melanogaster, chromosome 2L, region 36X-36X, BAC clone BACR21C10, complete sequence Length = 164439 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 cgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||| Sbjct: 23061 cgtcgtcctcgtcctcgtcc 23080
>gb|BC093434.1| Danio rerio hypothetical protein LOC553406, mRNA (cDNA clone IMAGE:7158173), partial cds Length = 1383 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 ggcggaggagggcttctttc 420 |||||||||||||||||||| Sbjct: 674 ggcggaggagggcttctttc 655
>gb|AC006762.2| Caenorhabditis elegans cosmid Y42G9A, complete sequence Length = 30585 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gcttgaattttcttcttctt 252 |||||||||||||||||||| Sbjct: 27384 gcttgaattttcttcttctt 27403
>ref|XM_393227.2| PREDICTED: Apis mellifera similar to GA17495-PA (LOC409729), mRNA Length = 7938 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 1021 tcgtcgtcctcgtcctcgtc 1040
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 23566342 tcgtcgtcctcgtcctcgtc 23566323
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||| Sbjct: 19625665 cgtcgtcctcgtcctcgtcc 19625646 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 11808122 tcgtcgtcctcgtcctcgtc 11808141 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 4350176 tcgtcgtcctcgtcctcgtc 4350195
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||| Sbjct: 35286384 cgtcgtcctcgtcctcgtcc 35286365 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 6450251 tcgtcgtcctcgtcctcgtc 6450232
>gb|L00036.1|HS1US Human herpesvirus strain 17 complete short unique region with partial terminal and inverted repeats DNA, complete cds Length = 26245 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 21705 tcgtcgtcctcgtcctcgtc 21686 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 4541 tcgtcgtcctcgtcctcgtc 4560
>gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complete sequence Length = 193015 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 attttcttcttcttacaaga 258 |||||||||||||||||||| Sbjct: 73314 attttcttcttcttacaaga 73295
>gb|AC008050.6|AC008050 Homo sapiens chromosome 14 clone RP11-141I24 map 14q24.3, complete sequence Length = 176975 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 aattttcttcttcttacaag 257 |||||||||||||||||||| Sbjct: 90430 aattttcttcttcttacaag 90449
>gb|AC011372.7| Homo sapiens chromosome 5 clone CTB-108B20, complete sequence Length = 183330 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 tcctcccagcttgaattttc 244 |||||||||||||||||||| Sbjct: 25831 tcctcccagcttgaattttc 25812
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1203H11 Length = 156561 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gtcgtcctcgtcctcgtccg 372 |||||||||||||||||||| Sbjct: 56943 gtcgtcctcgtcctcgtccg 56962
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||| Sbjct: 36718 cgtcgtcctcgtcctcgtcc 36699
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 41756 tcgtcgtcctcgtcctcgtc 41775
>dbj|AP005805.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0006M19 Length = 144073 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 76057 tcgtcgtcctcgtcctcgtc 76076
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0506C10 Length = 150549 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||| Sbjct: 107397 cgtcgtcctcgtcctcgtcc 107378
>dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B21 Length = 143722 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||| Sbjct: 10121 cgtcgtcctcgtcctcgtcc 10102
>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_D05 Length = 128178 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 92244 tcgtcgtcctcgtcctcgtc 92225
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 18783 tcgtcgtcctcgtcctcgtc 18764
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 126735 tcgtcgtcctcgtcctcgtc 126716
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 10864 tcgtcgtcctcgtcctcgtc 10845
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||| Sbjct: 98434 cgtcgtcctcgtcctcgtcc 98415
>gb|AE005041.1| Halobacterium sp. NRC-1 section 72 of 170 of the complete genome Length = 13759 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 tcccggggccagcggcgcgg 438 |||||||||||||||||||| Sbjct: 13502 tcccggggccagcggcgcgg 13521
>emb|X06461.1|HEHSV1G3 Herpes simplex virus type I immediate early (IE) gene 3 for transcriptional activator IE175 (= ICP 4) Length = 6633 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 2093 tcgtcgtcctcgtcctcgtc 2074
>dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091F23 Length = 147699 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gtcgtcctcgtcctcgtccg 372 |||||||||||||||||||| Sbjct: 10785 gtcgtcctcgtcctcgtccg 10804
>dbj|AK111473.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-F03, full insert sequence Length = 1613 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gtcgtcctcgtcctcgtccg 372 |||||||||||||||||||| Sbjct: 1109 gtcgtcctcgtcctcgtccg 1128
>ref|XM_311354.2| Anopheles gambiae str. PEST ENSANGP00000021373 (ENSANGG00000018884), mRNA Length = 4648 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 ctcgtcgtcctcgtcctcgt 369 |||||||||||||||||||| Sbjct: 472 ctcgtcgtcctcgtcctcgt 491
>dbj|AK110100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-H07, full insert sequence Length = 2240 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 ctcgtcgtcctcgtcctcgtccga 373 ||||||||||||||| |||||||| Sbjct: 1719 ctcgtcgtcctcgtcgtcgtccga 1696
>dbj|AK110013.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-G12, full insert sequence Length = 3291 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 929 tcgtcgtcctcgtcctcgtc 910
>emb|AJ326466.1|HSA326466 Homo sapiens genomic sequence surrounding NotI site, clone NL6-AD14C Length = 615 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 191 tcgtcgtcctcgtcctcgtc 172
>dbj|AK071674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107L13, full insert sequence Length = 2059 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 234 tcgtcgtcctcgtcctcgtc 215
>gb|AC025715.3| Caenorhabditis elegans cosmid Y38F2AR, complete sequence Length = 97157 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gcttgaattttcttcttctt 252 |||||||||||||||||||| Sbjct: 332 gcttgaattttcttcttctt 313
>dbj|AK060649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H01, full insert sequence Length = 1377 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 gacggctgcggccgcaccggcggg 340 |||||||||||||| ||||||||| Sbjct: 997 gacggctgcggccggaccggcggg 974
>gb|AC156387.5| Mus musculus 10 BAC RP24-396H15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 230270 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agccagcaagaagtagtagt 145 |||||||||||||||||||| Sbjct: 45590 agccagcaagaagtagtagt 45609
>gb|AE003650.2| Drosophila melanogaster chromosome 2L, section 59 of 83 of the complete sequence Length = 273414 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 cgtcgtcctcgtcctcgtcc 371 |||||||||||||||||||| Sbjct: 58822 cgtcgtcctcgtcctcgtcc 58841
>gb|U86868.1|CPU86868 Chipmunk parvovirus non-structural protein 1 (NS1) gene, complete cds, and capsid protein (VP1) gene, partial cds Length = 5097 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 1939 tcgtcgtcctcgtcctcgtc 1920
>gb|AE003483.4| Drosophila melanogaster chromosome 3L, section 17 of 83 of the complete sequence Length = 175890 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 124669 tcgtcgtcctcgtcctcgtc 124650
>gb|AE003494.4| Drosophila melanogaster chromosome X, section 46 of 74 of the complete sequence Length = 310498 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 230750 tcgtcgtcctcgtcctcgtc 230769
>emb|Z82260.1|CEC32H11 Caenorhabditis elegans Cosmid C32H11, complete sequence Length = 31654 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gcttgaattttcttcttctt 252 |||||||||||||||||||| Sbjct: 15590 gcttgaattttcttcttctt 15609
>gb|AY998877.1| Lates calcarifer clone Lca90 microsatellite sequence Length = 614 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 563 tcgtcgtcctcgtcctcgtc 582
>gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome 16, complete sequence Length = 180800 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tcgtcgtcctcgtcctcgtc 370 |||||||||||||||||||| Sbjct: 22857 tcgtcgtcctcgtcctcgtc 22838
>emb|AL833781.5| Mouse DNA sequence from clone RP23-447J12 on chromosome 4, complete sequence Length = 165700 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gcttgaattttcttcttctt 252 |||||||||||||||||||| Sbjct: 94502 gcttgaattttcttcttctt 94521
>emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on chromosome 11, complete sequence Length = 250353 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gtctcgtcgtcctcgtcctcgtcc 371 ||||||||||||||||| |||||| Sbjct: 218761 gtctcgtcgtcctcgtcttcgtcc 218738 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,993,192 Number of Sequences: 3902068 Number of extensions: 3993192 Number of successful extensions: 84052 Number of sequences better than 10.0: 177 Number of HSP's better than 10.0 without gapping: 182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82321 Number of HSP's gapped (non-prelim): 1722 length of query: 485 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 463 effective length of database: 17,147,199,772 effective search space: 7939153494436 effective search space used: 7939153494436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
