ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart38e09 |
|---|---|
| Clone Library Name | barley_pub |
>P2_ARATH (Q39173) Probable NADP-dependent oxidoreductase P2 (EC 1.3.1.74)| Length = 343 Score = 90.5 bits (223), Expect = 2e-18 Identities = 41/64 (64%), Positives = 51/64 (79%) Frame = -1 Query: 463 KRVRMQGFIEPDHKHLYPEYRAWVMPHIKEGRVVYVEDVADGLEAAPGALIGLFHGRNVG 284 KR+R+QGF+ D YP++ V+P IKEG++ YVEDVADGLE AP AL+GLFHG+NVG Sbjct: 275 KRIRIQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDVADGLEKAPEALVGLFHGKNVG 334 Query: 283 KQVV 272 KQVV Sbjct: 335 KQVV 338
>P1_ARATH (Q39172) Probable NADP-dependent oxidoreductase P1 (EC 1.3.1.74)| Length = 345 Score = 90.5 bits (223), Expect = 2e-18 Identities = 40/64 (62%), Positives = 52/64 (81%) Frame = -1 Query: 463 KRVRMQGFIEPDHKHLYPEYRAWVMPHIKEGRVVYVEDVADGLEAAPGALIGLFHGRNVG 284 KR+R+QGF+ D Y ++ +V+PHI+EG++ YVEDVADGLE AP AL+GLFHG+NVG Sbjct: 277 KRIRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVG 336 Query: 283 KQVV 272 KQVV Sbjct: 337 KQVV 340
>YNCB_ECOLI (P76113) Putative NADP-dependent oxidoreductase yncB (EC 1.-.-.-)| Length = 353 Score = 58.5 bits (140), Expect = 8e-09 Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Frame = -1 Query: 463 KRVRMQGFI-EPDHKHLYPEYRAWVMPHIKEGRVVYVEDVADGLEAAPGALIGLFHGRNV 287 KR+R+QGFI D+ H E++ + +KE ++ Y E++ DGLE AP IGL G+N Sbjct: 283 KRIRLQGFIIAQDYGHRIHEFQREMGQWVKEDKIHYREEITDGLENAPQTFIGLLKGKNF 342 Query: 286 GKQVVKLTTPD 254 GK V+++ D Sbjct: 343 GKVVIRVAGDD 353
>LTB4D_RAT (P97584) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (Dithiolethione-inducible gene 1 protein) (D3T-inducible gene 1 protein) (DIG-1) Length = 329 Score = 40.8 bits (94), Expect = 0.002 Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Frame = -1 Query: 463 KRVRMQGFIEPDHK-HLYPEYRAWVMPHIKEGRVVYVEDVADGLEAAPGALIGLFHGRNV 287 +++RM+GFI + + + +M + EG++ Y E + +G E P A +G+ G N+ Sbjct: 263 QQLRMEGFIVTRWQGEVRQKALTDLMNWVSEGKIRYHEYITEGFEKMPAAFMGMLKGDNL 322 Query: 286 GKQVVK 269 GK +VK Sbjct: 323 GKTIVK 328
>LTB4D_PIG (Q29073) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 40.0 bits (92), Expect = 0.003 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -1 Query: 382 IKEGRVVYVEDVADGLEAAPGALIGLFHGRNVGKQVVK 269 + EG++ Y E + +G E P A +G+ G N+GK +VK Sbjct: 291 VSEGKIQYHEHITEGFENMPAAFMGMLKGENLGKAIVK 328
>LTB4D_MOUSE (Q91YR9) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 39.7 bits (91), Expect = 0.004 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 6/71 (8%) Frame = -1 Query: 463 KRVRMQGFI------EPDHKHLYPEYRAWVMPHIKEGRVVYVEDVADGLEAAPGALIGLF 302 +++RM+GFI E K L E WV EG+V E V +G E P A +G+ Sbjct: 263 QQLRMEGFIVNRWQGEVRQKAL-TELMNWV----SEGKVQCHEYVTEGFEKMPAAFMGML 317 Query: 301 HGRNVGKQVVK 269 G N+GK +VK Sbjct: 318 KGENLGKTIVK 328
>LTB4D_HUMAN (Q14914) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 38.1 bits (87), Expect = 0.011 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = -1 Query: 397 WVMPHIKEGRVVYVEDVADGLEAAPGALIGLFHGRNVGKQVVK 269 WV+ EG++ Y E + +G E P A +G+ G N+GK +VK Sbjct: 290 WVL----EGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 328
>LTB4D_RABIT (Q28719) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (ADRAB-F) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 349 Score = 37.7 bits (86), Expect = 0.015 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 6/67 (8%) Frame = -1 Query: 463 KRVRMQGFI------EPDHKHLYPEYRAWVMPHIKEGRVVYVEDVADGLEAAPGALIGLF 302 + +RM+GFI E K L E WV+ EG++ Y E V +G E P A + + Sbjct: 263 QEIRMEGFIFNRWKGEVGQKAL-KELLTWVL----EGKIQYREFVIEGFENMPAAFMRML 317 Query: 301 HGRNVGK 281 G NVGK Sbjct: 318 KGENVGK 324
>LTB4D_CAVPO (Q9EQZ5) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (LTB4) (12-HD) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (PGR) Length = 329 Score = 37.7 bits (86), Expect = 0.015 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 5/69 (7%) Frame = -1 Query: 463 KRVRMQGFI----EPD-HKHLYPEYRAWVMPHIKEGRVVYVEDVADGLEAAPGALIGLFH 299 K++R++GFI + D + + WV+ EG++ Y E V G E P A I + + Sbjct: 263 KQLRIEGFIVYRWQGDVREKALRDLMKWVL----EGKIQYHEHVTKGFENMPAAFIEMLN 318 Query: 298 GRNVGKQVV 272 G N+GK VV Sbjct: 319 GANLGKAVV 327
>QOR_LEIAM (P42865) Probable quinone oxidoreductase (EC 1.6.5.5)| (NADPH:quinone reductase) (P36) Length = 340 Score = 36.6 bits (83), Expect = 0.033 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = -1 Query: 463 KRVRMQGFIEPDHKHLYPEYRAWVMPHIKEGRVVYVED--VADGLEAAPGALIGLFHGRN 290 K + GF P + P+Y A ++ ++K G+V D V GL + A+ L+ G N Sbjct: 272 KSASLNGFFLPQFHDVIPKYMANLLQYLKAGQVKLFVDKKVFHGLSSVADAVDHLYSGAN 331 Query: 289 VGKQVVKL 266 GK +V++ Sbjct: 332 YGKVLVEI 339
>YNN4_YEAST (P53912) Hypothetical 41.2 kDa protein in FPR1-TOM22 intergenic| region Length = 376 Score = 32.0 bits (71), Expect = 0.81 Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = -1 Query: 436 EPDHKHLYPEYRAWVMPHIKEGRV--VYVEDVADGLEAAPGALIGLFHGRNVGKQVV 272 +P++K ++ ++ P I +G + + V+ +GL+ P L + HGRN G+++V Sbjct: 316 DPEYKEAAIKFIKFINPKINDGEIHHIPVKVYKNGLDDIPQLLDDIKHGRNSGEKLV 372
>ZADH1_MOUSE (Q8VDQ1) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = -1 Query: 379 KEGRVVYVEDVADGLEAAPGALIGLFHGRNVGKQVV 272 KEG++ E VA GLE A + G NVGKQ+V Sbjct: 308 KEGKLKVKETVAKGLENMGVAFQSMMTGGNVGKQIV 343
>ZADH1_PONPY (Q5R806) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -1 Query: 379 KEGRVVYVEDVADGLEAAPGALIGLFHGRNVGKQVV 272 KEG++ E V +GLE A + G N+GKQ+V Sbjct: 308 KEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIV 343
>ZADH1_HUMAN (Q8N8N7) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -1 Query: 379 KEGRVVYVEDVADGLEAAPGALIGLFHGRNVGKQVV 272 KEG++ E V +GLE A + G N+GKQ+V Sbjct: 308 KEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIV 343
>GATM_MACFA (Q4R806) Glycine amidinotransferase, mitochondrial precursor (EC| 2.1.4.1) (L-arginine:glycine amidinotransferase) (Transamidinase) (AT) Length = 423 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = -2 Query: 180 KDLFASQSQSQSYLVVEWGRK 118 KD+FA +SQ +YL +EW R+ Sbjct: 263 KDIFAQRSQVTNYLGIEWMRR 283 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,149,906 Number of Sequences: 219361 Number of extensions: 977365 Number of successful extensions: 3144 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 3065 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3140 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
