ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart38e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 159 9e-36
2dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic D... 159 9e-36
3dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 9e-36
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
5dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
6dbj|AK070507.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
7gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome ... 62 2e-06
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
9gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
10gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
11dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
12dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
13gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
14ref|XM_472069.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
16emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
17ref|NM_195276.1| Oryza sativa (japonica cultivar-group) putative... 48 0.025
18gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome... 48 0.025
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
20dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
21dbj|AK071840.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
22dbj|AK070224.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
23dbj|AK066828.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
24dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
25gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.025
26gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.025
27emb|AL928779.3|CNS08CC9 Oryza sativa chromosome 12, . BAC OSJNBa... 48 0.025
28emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb... 48 0.025
29ref|XM_476630.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
30emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chr... 42 1.5
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
32dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
33dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
34dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
35dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
36dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
37dbj|AK109408.2| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
38gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.0
39ref|XM_473241.1| Oryza sativa (japonica cultivar-group), predic... 40 6.0
40gb|AC146526.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
41gb|AY665713.1| Equine herpesvirus 1 strain Ab4, complete genome 40 6.0
42emb|AM050729.1| Mycobacterium smegmatis lexA gene and ddiG-nrdR ... 40 6.0
43emb|CR936838.15| Mouse DNA sequence from clone DN-127N6 on chrom... 40 6.0
44gb|AC011284.3| Homo sapiens BAC clone CTD-2326L19 from 7, comple... 40 6.0
45gb|AY464052.1| Equine herpesvirus 1 strain V592, complete genome 40 6.0
46emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4,... 40 6.0
47dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
48gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 6.0
49dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
50gb|AC130403.3| Homo sapiens 12 BAC RP11-674N14 (Roswell Park Can... 40 6.0
51dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 6.0
52dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
53dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
54emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 6.0
55dbj|AK059900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
56emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559... 40 6.0
57emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268... 40 6.0
58emb|AL671857.16| Mouse DNA sequence from clone RP23-176A21 on ch... 40 6.0 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  159 bits (80), Expect = 9e-36
 Identities = 170/200 (85%)
 Strand = Plus / Minus

                                                                            
Query: 195      tctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaagaaggcgtcgc 254
                ||||||||| |||||||||| ||||||| |||||||| || |||||||||||||||||||
Sbjct: 24792551 tctccggcgacatgtggttcgcccagtcgccggcgacgcccttcctgaagaaggcgtcgc 24792492

                                                                            
Query: 255      ggggcatggcgtggtacgcccccgacgagcccttcttgttcacctccaggcccttcatct 314
                | ||||||   | ||||| ||||| || ||||  |  ||||||||||||  |||||||| 
Sbjct: 24792491 gcggcatgctcttgtacgaccccgccgtgccccgccggttcacctccagcgccttcatcc 24792432

                                                                            
Query: 315      tctcgaagctgcacagctccaccacggcctccacggctccggcgccctcctcggcggacg 374
                ||||||||||||||| |||||| |||  | | ||||| |||||| |||||||||||| ||
Sbjct: 24792431 tctcgaagctgcacaactccacgacgctcgctacggcgccggcggcctcctcggcggccg 24792372

                                    
Query: 375      agaacggccggcccatgaac 394
                |||||||||| |||||||||
Sbjct: 24792371 agaacggccgccccatgaac 24792352



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 291     tgttcacctccaggcccttcatcttctcgaagctgca 327
               ||||||||||||||  |||||||| |||||| |||||
Sbjct: 2549654 tgttcacctccaggttcttcatctgctcgaaactgca 2549690



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 191      gccatctccggcgtcatgtggttcacccagtctccg 226
                |||||||| ||||| | |||||||||||| ||||||
Sbjct: 24848406 gccatctctggcgtgacgtggttcacccaatctccg 24848441
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>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0493C06
          Length = 158923

 Score =  159 bits (80), Expect = 9e-36
 Identities = 170/200 (85%)
 Strand = Plus / Minus

                                                                         
Query: 195   tctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaagaaggcgtcgc 254
             ||||||||| |||||||||| ||||||| |||||||| || |||||||||||||||||||
Sbjct: 27002 tctccggcgacatgtggttcgcccagtcgccggcgacgcccttcctgaagaaggcgtcgc 26943

                                                                         
Query: 255   ggggcatggcgtggtacgcccccgacgagcccttcttgttcacctccaggcccttcatct 314
             | ||||||   | ||||| ||||| || ||||  |  ||||||||||||  |||||||| 
Sbjct: 26942 gcggcatgctcttgtacgaccccgccgtgccccgccggttcacctccagcgccttcatcc 26883

                                                                         
Query: 315   tctcgaagctgcacagctccaccacggcctccacggctccggcgccctcctcggcggacg 374
             ||||||||||||||| |||||| |||  | | ||||| |||||| |||||||||||| ||
Sbjct: 26882 tctcgaagctgcacaactccacgacgctcgctacggcgccggcggcctcctcggcggccg 26823

                                 
Query: 375   agaacggccggcccatgaac 394
             |||||||||| |||||||||
Sbjct: 26822 agaacggccgccccatgaac 26803



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 191   gccatctccggcgtcatgtggttcacccagtctccg 226
             |||||||| ||||| | |||||||||||| ||||||
Sbjct: 82857 gccatctctggcgtgacgtggttcacccaatctccg 82892
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>dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B04, full
            insert sequence
          Length = 1369

 Score =  159 bits (80), Expect = 9e-36
 Identities = 170/200 (85%)
 Strand = Plus / Minus

                                                                        
Query: 195  tctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaagaaggcgtcgc 254
            ||||||||| |||||||||| ||||||| |||||||| || |||||||||||||||||||
Sbjct: 1024 tctccggcgacatgtggttcgcccagtcgccggcgacgcccttcctgaagaaggcgtcgc 965

                                                                        
Query: 255  ggggcatggcgtggtacgcccccgacgagcccttcttgttcacctccaggcccttcatct 314
            | ||||||   | ||||| ||||| || ||||  |  ||||||||||||  |||||||| 
Sbjct: 964  gcggcatgctcttgtacgaccccgccgtgccccgccggttcacctccagcgccttcatcc 905

                                                                        
Query: 315  tctcgaagctgcacagctccaccacggcctccacggctccggcgccctcctcggcggacg 374
            ||||||||||||||| |||||| |||  | | ||||| |||||| |||||||||||| ||
Sbjct: 904  tctcgaagctgcacaactccacgacgctcgctacggcgccggcggcctcctcggcggccg 845

                                
Query: 375  agaacggccggcccatgaac 394
            |||||||||| |||||||||
Sbjct: 844  agaacggccgccccatgaac 825
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                                
Query: 190     cgccatctccggcgtcatgtggttcacccagtc 222
               |||||||||||||||||||||||||||||||||
Sbjct: 7945862 cgccatctccggcgtcatgtggttcacccagtc 7945830



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 391      gaactccgccagcctcctcacgtgc 415
                ||||||||||||||||| |||||||
Sbjct: 24908840 gaactccgccagcctccgcacgtgc 24908864
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>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0046H10
          Length = 155544

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                              
Query: 190   cgccatctccggcgtcatgtggttcacccagtc 222
             |||||||||||||||||||||||||||||||||
Sbjct: 53380 cgccatctccggcgtcatgtggttcacccagtc 53348
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>dbj|AK070507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054C04, full
            insert sequence
          Length = 1260

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                             
Query: 190  cgccatctccggcgtcatgtggttcacccagtc 222
            |||||||||||||||||||||||||||||||||
Sbjct: 1063 cgccatctccggcgtcatgtggttcacccagtc 1031
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>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0043I04, complete sequence
          Length = 145191

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                    
Query: 190   cgccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaag 244
             ||||||| ||||||||||||||||   |||||| |||||||| ||||||||||||
Sbjct: 59465 cgccatcgccggcgtcatgtggttgcgccagtcgccggcgacacctttcctgaag 59411
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                       
Query: 190      cgccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaag 244
                ||||||| ||||||||||||||||   |||||| |||||||| ||||||||||||
Sbjct: 21713445 cgccatcgccggcgtcatgtggttgcgccagtcgccggcgacacctttcctgaag 21713391
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>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21,
              complete sequence
          Length = 146539

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                          
Query: 179    tccagccgggtcgccatctccggcgtcatgtggttcacccagtctccggcgacccctttc 238
              |||||||| | |||||||||||||| |||||||||   |||||| ||||| |||||| ||
Sbjct: 116648 tccagccgcgacgccatctccggcgacatgtggttgctccagtcgccggccacccctctc 116589

                       
Query: 239    ctgaagaag 247
              | |||||||
Sbjct: 116588 cggaagaag 116580



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 374   gagaacggccggcccatgaactccgccagcctcctcacgt 413
             |||||||| | |||||||||||| |||||| |||||||||
Sbjct: 75441 gagaacgggcagcccatgaactcggccagcttcctcacgt 75402
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>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10,
              complete sequence
          Length = 157609

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                          
Query: 179    tccagccgggtcgccatctccggcgtcatgtggttcacccagtctccggcgacccctttc 238
              |||||||| | |||||||||||||| |||||||||   |||||| ||||| |||||| ||
Sbjct: 142641 tccagccgcgacgccatctccggcgacatgtggttgctccagtcgccggccacccctctc 142582

                       
Query: 239    ctgaagaag 247
              | |||||||
Sbjct: 142581 cggaagaag 142573



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 374    gagaacggccggcccatgaactccgccagcctcctcacgt 413
              |||||||| | |||||||||||| |||||| |||||||||
Sbjct: 101434 gagaacgggcagcccatgaactcggccagcttcctcacgt 101395
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                            
Query: 179      tccagccgggtcgccatctccggcgtcatgtggttcacccagtctccggcgacccctttc 238
                |||||||| | |||||||||||||| |||||||||   |||||| ||||| |||||| ||
Sbjct: 17387866 tccagccgcgacgccatctccggcgacatgtggttgctccagtcgccggccacccctctc 17387807

                         
Query: 239      ctgaagaag 247
                | |||||||
Sbjct: 17387806 cggaagaag 17387798



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 374      gagaacggccggcccatgaactccgccagcctcctcacgt 413
                |||||||| | |||||||||||| |||||| |||||||||
Sbjct: 17346510 gagaacgggcagcccatgaactcggccagcttcctcacgt 17346471



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 385      gcccatgaactccgccagcctcct 408
                ||||||||||||||||||| ||||
Sbjct: 14536632 gcccatgaactccgccagcgtcct 14536655
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>dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H02, full
            insert sequence
          Length = 1222

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                        
Query: 179  tccagccgggtcgccatctccggcgtcatgtggttcacccagtctccggcgacccctttc 238
            |||||||| | |||||||||||||| |||||||||   |||||| ||||| |||||| ||
Sbjct: 1092 tccagccgcgacgccatctccggcgacatgtggttgctccagtcgccggccacccctctc 1033

                     
Query: 239  ctgaagaag 247
            | |||||||
Sbjct: 1032 cggaagaag 1024
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                            
Query: 179      tccagccgggtcgccatctccggcgtcatgtggttcacccagtctccggcgacccctttc 238
                |||||||| | |||||||||||||| |||||||||   |||||| ||||| |||||| ||
Sbjct: 17481576 tccagccgcgacgccatctccggcgacatgtggttgctccagtcgccggccacccctctc 17481517

                         
Query: 239      ctgaagaag 247
                | |||||||
Sbjct: 17481516 cggaagaag 17481508



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 374      gagaacggccggcccatgaactccgccagcctcctcacgt 413
                |||||||| | |||||||||||| |||||| |||||||||
Sbjct: 17440369 gagaacgggcagcccatgaactcggccagcttcctcacgt 17440330



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 385      gcccatgaactccgccagcctcct 408
                ||||||||||||||||||| ||||
Sbjct: 14618633 gcccatgaactccgccagcgtcct 14618656
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>ref|XM_472069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1077

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                  
Query: 191  gccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaag 244
            ||||||||| | ||||||||   |||||||||||| ||||| ||||||||||||
Sbjct: 1004 gccatctcccgggtcatgtgacccacccagtctccagcgactcctttcctgaag 951
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                      
Query: 191      gccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaag 244
                ||||||||| | ||||||||   |||||||||||| ||||| ||||||||||||
Sbjct: 17195678 gccatctcccgggtcatgtgacccacccagtctccagcgactcctttcctgaag 17195731



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 376      gaacggccggcccatgaactccgccagcctcc 407
                ||||||| |||| | |||||||||||||||||
Sbjct: 26294673 gaacggcaggccgacgaactccgccagcctcc 26294642
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>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19,
              complete sequence
          Length = 169559

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                    
Query: 191    gccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaag 244
              ||||||||| | ||||||||   |||||||||||| ||||| ||||||||||||
Sbjct: 139975 gccatctcccgggtcatgtgacccacccagtctccagcgactcctttcctgaag 140028
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>ref|NM_195276.1| Oryza sativa (japonica cultivar-group) putative flavonol
           3-sulfotransferase (OSJNBb0038H12.7), mRNA
          Length = 1005

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 306 ccttcatcttctcgaagctgcacagctc 333
           ||||||||||||| ||||||||||||||
Sbjct: 826 ccttcatcttctcaaagctgcacagctc 799
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>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0038H12 map E60284SA, complete sequence
          Length = 139190

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 306   ccttcatcttctcgaagctgcacagctc 333
             ||||||||||||| ||||||||||||||
Sbjct: 21150 ccttcatcttctcaaagctgcacagctc 21123
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 288     tcttgttcacctccaggcccttcatcttctcgaagctgcacagc 331
               |||| |||||||||| || |||||  ||||||||||||||||||
Sbjct: 9821633 tcttattcacctccaagctcttcaggttctcgaagctgcacagc 9821676



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 188      gtcgccatctccggcgtcat 207
                ||||||||||||||||||||
Sbjct: 27205733 gtcgccatctccggcgtcat 27205752
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 306     ccttcatcttctcgaagctgcacagctc 333
               ||||||||||||| ||||||||||||||
Sbjct: 5902733 ccttcatcttctcaaagctgcacagctc 5902760
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>dbj|AK071840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F12, full
           insert sequence
          Length = 1834

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 288 tcttgttcacctccaggcccttcatcttctcgaagctgcacagc 331
           |||| |||||||||| || |||||  ||||||||||||||||||
Sbjct: 801 tcttattcacctccaagctcttcaggttctcgaagctgcacagc 758
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>dbj|AK070224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042G18, full
           insert sequence
          Length = 1207

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 288 tcttgttcacctccaggcccttcatcttctcgaagctgcacagc 331
           |||| |||||||||| || |||||  ||||||||||||||||||
Sbjct: 873 tcttattcacctccaagctcttcaggttctcgaagctgcacagc 830
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>dbj|AK066828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075L15, full
           insert sequence
          Length = 1243

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 306 ccttcatcttctcgaagctgcacagctc 333
           ||||||||||||| ||||||||||||||
Sbjct: 934 ccttcatcttctcaaagctgcacagctc 907
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>dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D11, full
           insert sequence
          Length = 1225

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 374 gagaacggccggcccatgaactccgccagcctcctcacgt 413
           |||||||| | |||||||||||| |||||| |||||||||
Sbjct: 784 gagaacgggcagcccatgaactcggccagcttcctcacgt 745
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 306     ccttcatcttctcgaagctgcacagctc 333
               ||||||||||||| ||||||||||||||
Sbjct: 5903919 ccttcatcttctcaaagctgcacagctc 5903946
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 288     tcttgttcacctccaggcccttcatcttctcgaagctgcacagc 331
               |||| |||||||||| || |||||  ||||||||||||||||||
Sbjct: 9821518 tcttattcacctccaagctcttcaggttctcgaagctgcacagc 9821561



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 188      gtcgccatctccggcgtcat 207
                ||||||||||||||||||||
Sbjct: 27131333 gtcgccatctccggcgtcat 27131352
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>emb|AL928779.3|CNS08CC9 Oryza sativa chromosome 12, . BAC OSJNBa0054I14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 148089

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 288    tcttgttcacctccaggcccttcatcttctcgaagctgcacagc 331
              |||| |||||||||| || |||||  ||||||||||||||||||
Sbjct: 147590 tcttattcacctccaagctcttcaggttctcgaagctgcacagc 147633
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>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 140806

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 288    tcttgttcacctccaggcccttcatcttctcgaagctgcacagc 331
              |||| |||||||||| || |||||  ||||||||||||||||||
Sbjct: 110837 tcttattcacctccaagctcttcaggttctcgaagctgcacagc 110794
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>ref|XM_476630.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1644

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 291 tgttcacctccaggcccttcatcttctcgaagctgca 327
           ||||||||||||||  |||||||| |||||| |||||
Sbjct: 904 tgttcacctccaggttcttcatctgctcgaaactgca 868
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>emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chromosome 11 Contains the
             5' end of the Arf-1 gene for ADP-ribosylation factor 1,
             the Wnt3a gene for wingless-related MMTV integration site
             3A, the Wnt9a gene for wingless-type MMTV integration site
             9A, two novel genes, the 5' end of a novel gene and five
             CpG islands, complete sequence
          Length = 225396

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 319   gaagctgcacagctccaccac 339
             |||||||||||||||||||||
Sbjct: 96937 gaagctgcacagctccaccac 96917
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 310      catcttctcgaagctgcacagctcc 334
                ||||||||||||| |||||||||||
Sbjct: 33478143 catcttctcgaagttgcacagctcc 33478167
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>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 310   catcttctcgaagctgcacagctcc 334
             ||||||||||||| |||||||||||
Sbjct: 23340 catcttctcgaagttgcacagctcc 23364
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>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0022E03
          Length = 163032

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 291    tgttcacctccaggcccttcatcttctcgaagctgca 327
              ||||||||||||||  |||||||| |||||| |||||
Sbjct: 114634 tgttcacctccaggttcttcatctgctcgaaactgca 114670
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>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0530H05
          Length = 145952

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 391  gaactccgccagcctcctcacgtgc 415
            ||||||||||||||||| |||||||
Sbjct: 3395 gaactccgccagcctccgcacgtgc 3419
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>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0415A04
          Length = 160669

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 310    catcttctcgaagctgcacagctcc 334
              ||||||||||||| |||||||||||
Sbjct: 154309 catcttctcgaagttgcacagctcc 154333
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>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0072A21
          Length = 158287

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 391    gaactccgccagcctcctcacgtgc 415
              ||||||||||||||||| |||||||
Sbjct: 119923 gaactccgccagcctccgcacgtgc 119947
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>dbj|AK109408.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D04, full
           insert sequence
          Length = 1274

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 391 gaactccgccagcctcctcacgtgc 415
           ||||||||||||||||| |||||||
Sbjct: 842 gaactccgccagcctccgcacgtgc 818
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 306     ccttcatcttctcgaagctg 325
               ||||||||||||||||||||
Sbjct: 2728544 ccttcatcttctcgaagctg 2728525
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>ref|XM_473241.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1041

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 376 gaacggccggcccatgaactccgccagcctcc 407
           ||||||| |||| | |||||||||||||||||
Sbjct: 783 gaacggcaggccgacgaactccgccagcctcc 752
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>gb|AC146526.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0027D12 map near 50283S, complete sequence
          Length = 128988

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 385   gcccatgaactccgccagcctcct 408
             ||||||||||||||||||| ||||
Sbjct: 36045 gcccatgaactccgccagcgtcct 36068
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>gb|AY665713.1| Equine herpesvirus 1 strain Ab4, complete genome
          Length = 150224

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    cagctccaccacggcctcca 347
              ||||||||||||||||||||
Sbjct: 101630 cagctccaccacggcctcca 101649
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>emb|AM050729.1| Mycobacterium smegmatis lexA gene and ddiG-nrdR operon, strain ATCC
            700084
          Length = 2230

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 362  tcctcggcggacgagaacggccgg 385
            ||||||||||||||||||| ||||
Sbjct: 2137 tcctcggcggacgagaacgaccgg 2114
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>emb|CR936838.15| Mouse DNA sequence from clone DN-127N6 on chromosome 3, complete
             sequence
          Length = 174972

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    catctcttattcttaatcaaacag 35
             |||||||||||||| |||||||||
Sbjct: 56835 catctcttattcttgatcaaacag 56812
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>gb|AC011284.3| Homo sapiens BAC clone CTD-2326L19 from 7, complete sequence
          Length = 92959

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    atctcttattcttaatcaaa 32
             ||||||||||||||||||||
Sbjct: 26239 atctcttattcttaatcaaa 26258
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>gb|AY464052.1| Equine herpesvirus 1 strain V592, complete genome
          Length = 149430

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    cagctccaccacggcctcca 347
              ||||||||||||||||||||
Sbjct: 101561 cagctccaccacggcctcca 101580
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>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10,
             complete sequence
          Length = 141545

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 376   gaacggccggcccatgaactccgccagcctcc 407
             ||||||| |||| | |||||||||||||||||
Sbjct: 71250 gaacggcaggccgacgaactccgccagcctcc 71219
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                            
Query: 190      cgccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaagaaggc 249
                |||||||||||||| |||||| | |  |||||||||| |  | || ||||||||||||||
Sbjct: 27986336 cgccatctccggcgacatgtgctccttccagtctccgacctcacccttcctgaagaaggc 27986395
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     acggcctccacggctccggc 357
               ||||||||||||||||||||
Sbjct: 2371285 acggcctccacggctccggc 2371304
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>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0072I06
          Length = 162411

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 191   gccatctccggcgtcatgtggttcacccagtctccg 226
             |||||||| ||||| | |||||||||||| ||||||
Sbjct: 32038 gccatctctggcgtgacgtggttcacccaatctccg 32073
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>gb|AC130403.3| Homo sapiens 12 BAC RP11-674N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 195432

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 386   cccatgaactccgccagcctcctc 409
             |||||||||||| |||||||||||
Sbjct: 25723 cccatgaactcctccagcctcctc 25746
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 348    cggctccggcgccctcctcggcgg 371
              ||||||||| ||||||||||||||
Sbjct: 918258 cggctccggtgccctcctcggcgg 918235
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>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_A08
          Length = 119304

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                         
Query: 190   cgccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaagaaggc 249
             |||||||||||||| |||||| | |  |||||||||| |  | || ||||||||||||||
Sbjct: 29998 cgccatctccggcgacatgtgctccttccagtctccgacctcacccttcctgaagaaggc 30057
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>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1123_G04
          Length = 124666

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                          
Query: 190    cgccatctccggcgtcatgtggttcacccagtctccggcgacccctttcctgaagaaggc 249
              |||||||||||||| |||||| | |  |||||||||| |  | || ||||||||||||||
Sbjct: 113788 cgccatctccggcgacatgtgctccttccagtctccgacctcacccttcctgaagaaggc 113847
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    gctccaccacggcctccacg 349
              ||||||||||||||||||||
Sbjct: 123796 gctccaccacggcctccacg 123777
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>dbj|AK059900.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G02, full
           insert sequence
          Length = 1103

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 385 gcccatgaactccgccagcctcct 408
           ||||||||||||||||||| ||||
Sbjct: 682 gcccatgaactccgccagcgtcct 659
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>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 145816

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    gtcgccatctccggcgtcat 207
              ||||||||||||||||||||
Sbjct: 144633 gtcgccatctccggcgtcat 144652
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>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146585

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   gtcgccatctccggcgtcat 207
             ||||||||||||||||||||
Sbjct: 18765 gtcgccatctccggcgtcat 18784
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>emb|AL671857.16| Mouse DNA sequence from clone RP23-176A21 on chromosome 3, complete
              sequence
          Length = 207354

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 12     catctcttattcttaatcaaacag 35
              |||||||||||||| |||||||||
Sbjct: 150530 catctcttattcttgatcaaacag 150507


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,050,495
Number of Sequences: 3902068
Number of extensions: 3050495
Number of successful extensions: 58287
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57535
Number of HSP's gapped (non-prelim): 749
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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