Clone Name | rbart38d09 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_467091.1| Oryza sativa (japonica cultivar-group), mRNA Length = 404 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/67 (89%), Gaps = 4/67 (5%) Strand = Plus / Minus Query: 126 ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 184 |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 226 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 170 Query: 185 aaaaatt 191 ||||||| Sbjct: 169 aaaaatt 163
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/67 (89%), Gaps = 4/67 (5%) Strand = Plus / Minus Query: 126 ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 184 |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 26356294 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 26356238 Query: 185 aaaaatt 191 ||||||| Sbjct: 26356237 aaaaatt 26356231 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 289 gcgctcgccaaggccaccagcgccgcgacgccggccgcgcgcgc 332 |||| |||||| ||||| ||||| |||||||||||||||||||| Sbjct: 26356065 gcgcccgccaatgccacgagcgcggcgacgccggccgcgcgcgc 26356022
>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:P0491E01 Length = 136150 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/67 (89%), Gaps = 4/67 (5%) Strand = Plus / Minus Query: 126 ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 184 |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 88646 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 88590 Query: 185 aaaaatt 191 ||||||| Sbjct: 88589 aaaaatt 88583 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 289 gcgctcgccaaggccaccagcgccgcgacgccggccgcgcgcgc 332 |||| |||||| ||||| ||||| |||||||||||||||||||| Sbjct: 88417 gcgcccgccaatgccacgagcgcggcgacgccggccgcgcgcgc 88374
>dbj|AK062922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-H08, full insert sequence Length = 404 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/67 (89%), Gaps = 4/67 (5%) Strand = Plus / Minus Query: 126 ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 184 |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 226 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 170 Query: 185 aaaaatt 191 ||||||| Sbjct: 169 aaaaatt 163
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/67 (89%), Gaps = 4/67 (5%) Strand = Plus / Minus Query: 126 ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 184 |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 79437 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 79381 Query: 185 aaaaatt 191 ||||||| Sbjct: 79380 aaaaatt 79374 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 289 gcgctcgccaaggccaccagcgccgcgacgccggccgcgcgcgc 332 |||| |||||| ||||| ||||| |||||||||||||||||||| Sbjct: 79209 gcgcccgccaatgccacgagcgcggcgacgccggccgcgcgcgc 79166
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 agcgccgcgacgccggccgcgc 328 |||||||||||||||||||||| Sbjct: 1929641 agcgccgcgacgccggccgcgc 1929662 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ccagcgccgcgacgccggccgcgc 328 ||||| |||||||||||||||||| Sbjct: 65744 ccagccccgcgacgccggccgcgc 65721
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 194 atgacgacaccaaagaagaaaa 215 |||||||||||||||||||||| Sbjct: 1232271 atgacgacaccaaagaagaaaa 1232250
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 ggccaccagcgccgcgacgccggcc 324 ||||| ||||||||||||||||||| Sbjct: 4646203 ggccagcagcgccgcgacgccggcc 4646179
>gb|AC102689.10| Mus musculus chromosome 12, clone RP24-142L2, complete sequence Length = 203221 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 caccaaagaagaaaaaagcag 221 ||||||||||||||||||||| Sbjct: 183607 caccaaagaagaaaaaagcag 183587
>gb|AC127300.3| Mus musculus BAC clone RP23-264J18 from chromosome 8, complete sequence Length = 178649 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 aaagaagaaaaaagcagcagc 225 ||||||||||||||||||||| Sbjct: 126133 aaagaagaaaaaagcagcagc 126113
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 cagcgccgcgacgccggccgcgcgc 330 |||||||||||||||||| |||||| Sbjct: 4793254 cagcgccgcgacgccggcggcgcgc 4793278
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 cagcgccgcgacgccggccgcgcgc 330 |||||||||||||||||| |||||| Sbjct: 335414 cagcgccgcgacgccggcggcgcgc 335390
>gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosome 12, complete sequence Length = 196540 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 caccaaagaagaaaaaagcag 221 ||||||||||||||||||||| Sbjct: 33492 caccaaagaagaaaaaagcag 33472
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 cagcgccgcgacgccggccgcgcgc 330 |||||||||||||||||| |||||| Sbjct: 5066281 cagcgccgcgacgccggcggcgcgc 5066305
>dbj|AK086041.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830048B13 product:hypothetical protein, full insert sequence Length = 3256 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 aaagaagaaaaaagcagcagc 225 ||||||||||||||||||||| Sbjct: 1596 aaagaagaaaaaagcagcagc 1576
>gb|AY938407.1| Uncultured eukaryote clone ENI47296.00339 18S ribosomal RNA gene, partial sequence Length = 576 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 aaaccaaccactacccgccga 103 ||||||||||||||||||||| Sbjct: 49 aaaccaaccactacccgccga 29
>gb|AY938380.1| Uncultured eukaryote clone ENI47296.00298 18S ribosomal RNA gene, partial sequence Length = 235 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 aaaccaaccactacccgccga 103 ||||||||||||||||||||| Sbjct: 43 aaaccaaccactacccgccga 23
>gb|AY938362.1| Uncultured eukaryote clone ENI47296.00256 18S ribosomal RNA gene, partial sequence Length = 589 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 aaaccaaccactacccgccga 103 ||||||||||||||||||||| Sbjct: 49 aaaccaaccactacccgccga 29
>gb|AY938336.1| Uncultured eukaryote clone ENI47296.00208 18S ribosomal RNA gene, partial sequence Length = 570 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 aaaccaaccactacccgccga 103 ||||||||||||||||||||| Sbjct: 46 aaaccaaccactacccgccga 26
>gb|AY938304.1| Uncultured eukaryote clone ENI47296.00151 18S ribosomal RNA gene, partial sequence Length = 589 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 aaaccaaccactacccgccga 103 ||||||||||||||||||||| Sbjct: 49 aaaccaaccactacccgccga 29
>gb|AY938212.1| Uncultured eukaryote clone ENI42482.00364 18S ribosomal RNA gene, partial sequence Length = 573 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 aaaccaaccactacccgccga 103 ||||||||||||||||||||| Sbjct: 49 aaaccaaccactacccgccga 29
>gb|AY938060.1| Uncultured eukaryote clone ENI42482.00172 18S ribosomal RNA gene, partial sequence Length = 545 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 aaaccaaccactacccgccga 103 ||||||||||||||||||||| Sbjct: 49 aaaccaaccactacccgccga 29
>gb|AY937894.1| Uncultured eukaryote clone ENI40076.00794 18S ribosomal RNA gene, partial sequence Length = 607 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 aaaccaaccactacccgccga 103 ||||||||||||||||||||| Sbjct: 49 aaaccaaccactacccgccga 29
>gb|AY937836.1| Uncultured eukaryote clone ENI40076.00722 18S ribosomal RNA gene, partial sequence Length = 605 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 aaaccaaccactacccgccga 103 ||||||||||||||||||||| Sbjct: 45 aaaccaaccactacccgccga 25
>gb|AY937612.1| Uncultured eukaryote clone ENI40076.00315 18S ribosomal RNA gene, partial sequence Length = 568 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 aaaccaaccactacccgccga 103 ||||||||||||||||||||| Sbjct: 47 aaaccaaccactacccgccga 27
>gb|AY937581.1| Uncultured eukaryote clone ENI40076.00252 18S ribosomal RNA gene, partial sequence Length = 491 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 aaaccaaccactacccgccga 103 ||||||||||||||||||||| Sbjct: 44 aaaccaaccactacccgccga 24
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 cgcgacgccggccgcgcgcgc 332 ||||||||||||||||||||| Sbjct: 1545329 cgcgacgccggccgcgcgcgc 1545309 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ccgcgacgccggccgcgcgc 330 |||||||||||||||||||| Sbjct: 994651 ccgcgacgccggccgcgcgc 994632
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 cagcgccgcgacgccggccgc 326 ||||||||||||||||||||| Sbjct: 2207300 cagcgccgcgacgccggccgc 2207280
>dbj|AP004975.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT21J12, TM0158, complete sequence Length = 83377 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 cagaacatgcactaaaccaac 90 ||||||||||||||||||||| Sbjct: 13126 cagaacatgcactaaaccaac 13146
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 cgccaaggccaccagcgccg 313 |||||||||||||||||||| Sbjct: 3180066 cgccaaggccaccagcgccg 3180085
>ref|XM_511282.1| PREDICTED: Pan troglodytes similar to hypothetical protein MGC29671 (LOC454445), mRNA Length = 1965 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 ggaggacacagcatgcactggcct 261 ||||||| |||||||||||||||| Sbjct: 1087 ggaggacccagcatgcactggcct 1110
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ccgcgacgccggccgcgcgc 330 |||||||||||||||||||| Sbjct: 3588260 ccgcgacgccggccgcgcgc 3588279
>ref|NM_133611.1| Rattus norvegicus solute carrier family 2 (facilitated glucose transporter), member 13 (Slc2a13), mRNA Length = 2504 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ccagcgccgcgacgccggccgcgc 328 |||||||||||||| ||||||||| Sbjct: 463 ccagcgccgcgacggcggccgcgc 440
>ref|NM_012897.1| Rattus norvegicus adrenergic receptor kinase, beta 2 (Adrbk2), mRNA Length = 2464 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gcgacgccggccgcgcgcgc 332 |||||||||||||||||||| Sbjct: 67 gcgacgccggccgcgcgcgc 86
>ref|NM_001017100.2| Xenopus tropicalis hypothetical protein LOC549854 (LOC549854), mRNA Length = 2026 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 caccaaagaagaaaaaagcagcag 224 |||||||||||||| ||||||||| Sbjct: 524 caccaaagaagaaagaagcagcag 501
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gccggccgcgcgcgctgtgg 337 |||||||||||||||||||| Sbjct: 595250 gccggccgcgcgcgctgtgg 595269
>gb|AC147656.3| Pan troglodytes BAC clone CH251-505H4 from Y, complete sequence Length = 238079 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 160600 acacaaaatcctctctctgtagaa 160623
>gb|AC112081.8| Rattus norvegicus 7 BAC CH230-192B8 (Children's Hospital Oakland Research Institute) complete sequence Length = 150311 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ccagcgccgcgacgccggccgcgc 328 |||||||||||||| ||||||||| Sbjct: 123008 ccagcgccgcgacggcggccgcgc 122985
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gccggccgcgcgcgctgtgg 337 |||||||||||||||||||| Sbjct: 3179554 gccggccgcgcgcgctgtgg 3179535
>gb|AE009333.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 103 of 187 of the complete sequence Length = 13898 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 tgcgctgctgctgtcggtca 358 |||||||||||||||||||| Sbjct: 10910 tgcgctgctgctgtcggtca 10891
>gb|AE008281.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 85 of 187 of the complete sequence Length = 13620 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 tgcgctgctgctgtcggtca 358 |||||||||||||||||||| Sbjct: 4306 tgcgctgctgctgtcggtca 4325
>gb|AC147667.3| Pan troglodytes BAC clone CH251-114F17 from Y, complete sequence Length = 182271 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 178622 acacaaaatcctctctctgtagaa 178599
>gb|AC147660.2| Pan troglodytes BAC clone CH251-389M10 from Y, complete sequence Length = 175868 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 14138 acacaaaatcctctctctgtagaa 14115
>gb|AC099704.7| Mus musculus chromosome 15, clone RP23-256A2, complete sequence Length = 204704 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 ccagcgccgcgacgccggccgcgc 328 |||||||||||||| ||||||||| Sbjct: 58538 ccagcgccgcgacggcggccgcgc 58561
>gb|AC146190.3| Pan troglodytes BAC clone CH251-509K23 from Y, complete sequence Length = 213746 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 76256 acacaaaatcctctctctgtagaa 76279
>gb|AC131773.3| Mus musculus BAC clone RP24-308A19 from chromosome 15, complete sequence Length = 168423 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ccagcgccgcgacgccggccgcgc 328 |||||||||||||| ||||||||| Sbjct: 80844 ccagcgccgcgacggcggccgcgc 80821
>gb|AC124481.2| Mus musculus BAC clone RP24-119I10 from chromosome 1, complete sequence Length = 182261 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 aaatcctctctctatagaac 29 |||||||||||||||||||| Sbjct: 125935 aaatcctctctctatagaac 125954
>gb|AC146268.2| Pan troglodytes BAC clone CH251-57I2 from Y, complete sequence Length = 195737 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 119303 acacaaaatcctctctctgtagaa 119280
>emb|AL451130.8| Human DNA sequence from clone RP11-10G21 on chromosome 9, complete sequence Length = 100228 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 gacaccaaagaagaaaaaag 218 |||||||||||||||||||| Sbjct: 45990 gacaccaaagaagaaaaaag 45971
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gccggccgcgcgcgctgtgg 337 |||||||||||||||||||| Sbjct: 3544500 gccggccgcgcgcgctgtgg 3544481
>gb|AC102542.8| Mus musculus, clone RP23-110O23, complete sequence Length = 270695 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 gacaccaaagaagaaaaaag 218 |||||||||||||||||||| Sbjct: 255063 gacaccaaagaagaaaaaag 255044
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggccaccagcgccgcgacgc 319 |||||||||||||||||||| Sbjct: 123689 ggccaccagcgccgcgacgc 123708
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggccaccagcgccgcgacgc 319 |||||||||||||||||||| Sbjct: 76311 ggccaccagcgccgcgacgc 76330
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggccaccagcgccgcgacgc 319 |||||||||||||||||||| Sbjct: 342460 ggccaccagcgccgcgacgc 342479
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cagcgccgcgacgccggccg 325 |||||||||||||||||||| Sbjct: 328224 cagcgccgcgacgccggccg 328205
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gccggccgcgcgcgctgtgg 337 |||||||||||||||||||| Sbjct: 2909434 gccggccgcgcgcgctgtgg 2909415
>emb|AJ276414.1|AAN276414 Artemisia annua partial gASC23 gene for putative sesquiterpene cyclase, exons 1-3 Length = 788 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 catgcactaaaccaaccact 94 |||||||||||||||||||| Sbjct: 380 catgcactaaaccaaccact 399
>dbj|BS000662.3| Pan troglodytes chromosome Y clone: PTB-143L19, complete sequence Length = 193499 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 32014 acacaaaatcctctctctgtagaa 32037
>dbj|BS000597.1| Pan troglodytes chromosome Y clone:PTB-206N19, complete sequences Length = 205779 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 27549 acacaaaatcctctctctgtagaa 27572
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 gccggccgcgcgcgctgtgg 337 |||||||||||||||||||| Sbjct: 2160155 gccggccgcgcgcgctgtgg 2160136
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 14020737 acacaaaatcctctctctgtagaa 14020760 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 13687179 acacaaaatcctctctctgtagaa 13687156 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 10046896 acacaaaatcctctctctgtagaa 10046873 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 4220859 acacaaaatcctctctctgtagaa 4220882
>ref|NM_001033633.1| Mus musculus solute carrier family 2 (facilitated glucose transporter), member 13 (Slc2a13), mRNA Length = 6535 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ccagcgccgcgacgccggccgcgc 328 |||||||||||||| ||||||||| Sbjct: 541 ccagcgccgcgacggcggccgcgc 518
>gb|AC164571.3| Pan troglodytes BAC clone CH251-967O8 from chromosome y, complete sequence Length = 225200 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 3515 acacaaaatcctctctctgtagaa 3492
>dbj|AK147341.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1016E12 product:Proton myo-inositol transporter homolog [Rattus norvegicus], full insert sequence Length = 6535 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ccagcgccgcgacgccggccgcgc 328 |||||||||||||| ||||||||| Sbjct: 541 ccagcgccgcgacggcggccgcgc 518
>gb|AC146250.5| Pan troglodytes BAC clone CH251-148B21 from chromosome y, complete sequence Length = 175351 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 33133 acacaaaatcctctctctgtagaa 33110
>gb|AC150279.2| Pan troglodytes BAC clone CH251-100M4 from chromosome y, complete sequence Length = 171329 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 166141 acacaaaatcctctctctgtagaa 166118
>gb|AC154682.2| Mus musculus BAC clone RP24-315N18 from chromosome 14, complete sequence Length = 171851 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gacaccaaagaagaaaaaag 218 |||||||||||||||||||| Sbjct: 111461 gacaccaaagaagaaaaaag 111480
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cgccgcgacgccggccgcgc 328 |||||||||||||||||||| Sbjct: 1298300 cgccgcgacgccggccgcgc 1298319
>gb|AC148940.5| Pan troglodytes BAC clone CH251-96J19 from chromosome y, complete sequence Length = 182743 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 96251 acacaaaatcctctctctgtagaa 96228
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 aggaagacggcgaggcccgc 290 |||||||||||||||||||| Sbjct: 265171 aggaagacggcgaggcccgc 265152
>gb|AF193424.1|AF193424 Plasmodium falciparum variant surface protein PfEMP1 (var) gene, partial cds Length = 6823 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 186 aaaattaaatgacgacaccaaagaagaa 213 |||||| ||||||||| ||||||||||| Sbjct: 5290 aaaattgaatgacgactccaaagaagaa 5317
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 ggccaccagcgccgcgacgccggc 323 ||||| |||||||||||||||||| Sbjct: 1123115 ggccagcagcgccgcgacgccggc 1123138
>emb|AJ315643.1|RNO315643 Rattus norvegicus mRNA for proton myo-inositol symporter (Hmit gene) Length = 2504 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ccagcgccgcgacgccggccgcgc 328 |||||||||||||| ||||||||| Sbjct: 463 ccagcgccgcgacggcggccgcgc 440
>emb|CR761298.2| Xenopus tropicalis finished cDNA, clone TEgg020p16 Length = 2026 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 caccaaagaagaaaaaagcagcag 224 |||||||||||||| ||||||||| Sbjct: 524 caccaaagaagaaagaagcagcag 501
>gb|AC150878.5| Pan troglodytes BAC clone CH251-589A4 from chromosome y, complete sequence Length = 42703 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 acacaaaatcctctctctatagaa 28 |||||||||||||||||| ||||| Sbjct: 9588 acacaaaatcctctctctgtagaa 9565
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gaagacggcgaggcccgcgc 292 |||||||||||||||||||| Sbjct: 891559 gaagacggcgaggcccgcgc 891540
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 aggaagacggcgaggcccgc 290 |||||||||||||||||||| Sbjct: 1625941 aggaagacggcgaggcccgc 1625960
>emb|AL645806.9| Mouse DNA sequence from clone CT7-316H20 on chromosome 3, complete sequence Length = 129775 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 gacaccaaagaagaaaaaag 218 |||||||||||||||||||| Sbjct: 72396 gacaccaaagaagaaaaaag 72377
>emb|AL627102.21| Mouse DNA sequence from clone RP23-291A3 on chromosome 3, complete sequence Length = 211349 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 gacaccaaagaagaaaaaag 218 |||||||||||||||||||| Sbjct: 205742 gacaccaaagaagaaaaaag 205723
>emb|AL772385.8| Mouse DNA sequence from clone RP23-340E12 on chromosome 4, complete sequence Length = 220248 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 aaagaagaaaaaagcagcag 224 |||||||||||||||||||| Sbjct: 115551 aaagaagaaaaaagcagcag 115532
>gb|M87855.1|RATBARK2 Rattus norvegicus beta-adrenergic receptor kinase 2 (beta-ARK2) mRNA, complete cds Length = 2464 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gcgacgccggccgcgcgcgc 332 |||||||||||||||||||| Sbjct: 67 gcgacgccggccgcgcgcgc 86 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,462,229 Number of Sequences: 3902068 Number of extensions: 4462229 Number of successful extensions: 89759 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86725 Number of HSP's gapped (non-prelim): 3024 length of query: 425 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 403 effective length of database: 17,147,199,772 effective search space: 6910321508116 effective search space used: 6910321508116 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)