ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart38d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.022
2dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.022
3emb|BX324159.6| Zebrafish DNA sequence from clone CH211-10O1 in ... 40 0.34
4emb|BX897719.9| Zebrafish DNA sequence from clone CH211-199I23 i... 40 0.34
5gb|AC150414.2| Branchiostoma floridae clone CH302-62C22, complet... 38 1.3
6emb|AL596443.4| Human DNA sequence from clone RP11-268K4 on chro... 38 1.3
7emb|BX957247.4| Zebrafish DNA sequence from clone DKEYP-117H10 i... 38 1.3
8emb|BX321886.14| Zebrafish DNA sequence from clone DKEYP-46C9 in... 38 1.3
9gb|AC109998.2| Homo sapiens chromosome 5 clone CTD-2203A3, compl... 38 1.3
10gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, comp... 38 1.3
11emb|BX005106.5| Zebrafish DNA sequence from clone DKEY-188I13, c... 38 1.3
12emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in ... 38 1.3
13emb|CR847923.8| Zebrafish DNA sequence from clone DKEY-231N3 in ... 38 1.3
14emb|BX005347.5| Zebrafish DNA sequence from clone DKEY-199K9 in ... 38 1.3
15gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, com... 36 5.3
16gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, com... 36 5.3
17gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome ... 36 5.3
18gb|AC138114.3| Mus musculus BAC clone RP24-247F6 from chromosome... 36 5.3
19gb|AC123065.3| Mus musculus BAC clone RP23-239F13 from 9, comple... 36 5.3
20gb|AC157731.2| Xenopus tropicalis clone ISB1-333L14, complete se... 36 5.3
21gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete se... 36 5.3
22gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete seq... 36 5.3
23gb|AC150978.15| Medicago truncatula clone mth2-66m17, complete s... 36 5.3
24gb|AC148397.13| Medicago truncatula clone mth2-22h4, complete se... 36 5.3
25gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete s... 36 5.3
26gb|BC057609.1| Mus musculus cDNA clone IMAGE:6400417, **** WARNI... 36 5.3
27emb|BX068704.1|CNS09P6C Single read from an extremity of a full-... 36 5.3
28emb|BX028729.1|CNS08UBX Single read from an extremity of a full-... 36 5.3
29emb|BX027354.1|CNS08T9Q Single read from an extremity of a full-... 36 5.3
30emb|BX019858.1|CNS08NHI Single read from an extremity of a full-... 36 5.3
31emb|BX010659.1|CNS08GDZ Single read from an extremity of a full-... 36 5.3
32emb|CR854930.5| Zebrafish DNA sequence from clone CH211-268F11 i... 36 5.3
33emb|CR788323.5| Zebrafish DNA sequence from clone DKEYP-71G11 in... 36 5.3
34emb|BX323858.12| Zebrafish DNA sequence from clone DKEY-102F10 i... 36 5.3
35gb|AC022495.17| Homo sapiens 3 BAC RP11-94I16 (Roswell Park Canc... 36 5.3
36emb|BX248113.22| Zebrafish DNA sequence from clone CH211-132F21,... 36 5.3
37gb|AC103727.2| Homo sapiens chromosome 18, clone RP11-189C5, com... 36 5.3
38gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome... 36 5.3
39emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 i... 36 5.3
40emb|BX548002.12| Zebrafish DNA sequence from clone CH211-170I2 i... 36 5.3
41emb|BX284616.13| Zebrafish DNA sequence from clone DKEY-192I20 i... 36 5.3
42emb|BX816818.1|CNS0AEKJ Arabidopsis thaliana Full-length cDNA Co... 36 5.3
43gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 36 5.3
44gb|AC110921.9| Homo sapiens chromosome 17, clone CTD-2653B5, com... 36 5.3
45emb|BX248105.5| Zebrafish DNA sequence from clone CH211-270A9, c... 36 5.3
46ref|XM_308845.2| Anopheles gambiae str. PEST ENSANGP00000021812 ... 36 5.3
47gb|AC004825.2|AC004825 Homo sapiens PAC clone RP1-292L20 from 14... 36 5.3
48emb|AL445903.3|CNS07EEU Human chromosome 14 DNA sequence BAC R-1... 36 5.3
49emb|BX663516.23| Zebrafish DNA sequence from clone DKEY-16F21 in... 36 5.3
50gb|AC147636.3| Mus musculus BAC clone RP23-201C3 from 9, complet... 36 5.3
51emb|AL645689.11| Zebrafish DNA sequence from clone XX-BAC7CSE, c... 36 5.3
52emb|BX293540.5| Zebrafish DNA sequence from clone DKEY-255N2 in ... 36 5.3
53gb|AC142557.3| Cercopithecus aethiops clone CH252-402M4, complet... 36 5.3 
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.022
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 14       acaatttcacacaacacaaactgctc 39
                |||||||||||||||||||| |||||
Sbjct: 19584656 acaatttcacacaacacaaattgctc 19584631
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>dbj|AP004658.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0042B03
          Length = 167669

 Score = 44.1 bits (22), Expect = 0.022
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 14    acaatttcacacaacacaaactgctc 39
             |||||||||||||||||||| |||||
Sbjct: 60216 acaatttcacacaacacaaattgctc 60191
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>emb|BX324159.6| Zebrafish DNA sequence from clone CH211-10O1 in linkage group 21,
             complete sequence
          Length = 178610

 Score = 40.1 bits (20), Expect = 0.34
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    caatttcacacaacacaaac 34
             ||||||||||||||||||||
Sbjct: 68577 caatttcacacaacacaaac 68596
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>emb|BX897719.9| Zebrafish DNA sequence from clone CH211-199I23 in linkage group 13,
              complete sequence
          Length = 216407

 Score = 40.1 bits (20), Expect = 0.34
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     tcacacaacacaaactgctc 39
              ||||||||||||||||||||
Sbjct: 105079 tcacacaacacaaactgctc 105098
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>gb|AC150414.2| Branchiostoma floridae clone CH302-62C22, complete sequence
          Length = 210179

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     ctgcattacaatttcacac 25
             |||||||||||||||||||
Sbjct: 29411 ctgcattacaatttcacac 29429
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>emb|AL596443.4| Human DNA sequence from clone RP11-268K4 on chromosome 6 Contains a
            CpG island, complete sequence
          Length = 32305

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    atatatctgcattacaatt 19
            |||||||||||||||||||
Sbjct: 3485 atatatctgcattacaatt 3503
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>emb|BX957247.4| Zebrafish DNA sequence from clone DKEYP-117H10 in linkage group 23,
              complete sequence
          Length = 166306

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     cacacaacacaaactgctc 39
              |||||||||||||||||||
Sbjct: 155149 cacacaacacaaactgctc 155167
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>emb|BX321886.14| Zebrafish DNA sequence from clone DKEYP-46C9 in linkage group 8, complete
              sequence
          Length = 168093

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     cacacaacacaaactgctc 39
              |||||||||||||||||||
Sbjct: 154030 cacacaacacaaactgctc 154048
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>gb|AC109998.2| Homo sapiens chromosome 5 clone CTD-2203A3, complete sequence
          Length = 126394

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    cacacaacacaaactgctc 39
             |||||||||||||||||||
Sbjct: 32320 cacacaacacaaactgctc 32302
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>gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, complete sequence
          Length = 194860

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    cacacaacacaaactgctc 39
             |||||||||||||||||||
Sbjct: 22243 cacacaacacaaactgctc 22261
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>emb|BX005106.5| Zebrafish DNA sequence from clone DKEY-188I13, complete sequence
          Length = 216863

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    cacacaacacaaactgctc 39
             |||||||||||||||||||
Sbjct: 30304 cacacaacacaaactgctc 30286
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>emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in linkage group 7,
             complete sequence
          Length = 199752

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 13    tacaatttcacacaacacaaact 35
             |||| ||||||||||||||||||
Sbjct: 44311 tacattttcacacaacacaaact 44289
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>emb|CR847923.8| Zebrafish DNA sequence from clone DKEY-231N3 in linkage group 11,
             complete sequence
          Length = 101731

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    cacacaacacaaactgctc 39
             |||||||||||||||||||
Sbjct: 48658 cacacaacacaaactgctc 48676
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>emb|BX005347.5| Zebrafish DNA sequence from clone DKEY-199K9 in linkage group 17,
             complete sequence
          Length = 165991

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    cacacaacacaaactgctc 39
             |||||||||||||||||||
Sbjct: 74758 cacacaacacaaactgctc 74776
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>gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, complete sequence
          Length = 198469

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 8      tgcattacaatttcacac 25
              ||||||||||||||||||
Sbjct: 148725 tgcattacaatttcacac 148742
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>gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, complete sequence
          Length = 190857

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 12     ttacaatttcacacaaca 29
              ||||||||||||||||||
Sbjct: 125647 ttacaatttcacacaaca 125630
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>gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome 8, complete sequence
          Length = 193057

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 27     acacaaactgctcggctt 44
              ||||||||||||||||||
Sbjct: 105286 acacaaactgctcggctt 105269
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>gb|AC138114.3| Mus musculus BAC clone RP24-247F6 from chromosome 6, complete sequence
          Length = 170688

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 1      atatatctgcattacaatttca 22
              ||||||||||||| ||||||||
Sbjct: 112161 atatatctgcattccaatttca 112140
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>gb|AC123065.3| Mus musculus BAC clone RP23-239F13 from 9, complete sequence
          Length = 158137

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 3     atatctgcattacaattt 20
             ||||||||||||||||||
Sbjct: 73004 atatctgcattacaattt 73021
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>gb|AC157731.2| Xenopus tropicalis clone ISB1-333L14, complete sequence
          Length = 53127

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 27    acacaaactgctcggctt 44
             ||||||||||||||||||
Sbjct: 15573 acacaaactgctcggctt 15556
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>gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete sequence
          Length = 121144

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 17    atttcacacaacacaaactgct 38
             ||||||||||||||||| ||||
Sbjct: 13861 atttcacacaacacaaaatgct 13882
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>gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete sequence
          Length = 161536

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 16    aatttcacacaacacaaa 33
             ||||||||||||||||||
Sbjct: 64792 aatttcacacaacacaaa 64809
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>gb|AC150978.15| Medicago truncatula clone mth2-66m17, complete sequence
          Length = 125121

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 16     aatttcacacaacacaaa 33
              ||||||||||||||||||
Sbjct: 111541 aatttcacacaacacaaa 111524
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>gb|AC148397.13| Medicago truncatula clone mth2-22h4, complete sequence
          Length = 131213

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 16    aatttcacacaacacaaa 33
             ||||||||||||||||||
Sbjct: 10476 aatttcacacaacacaaa 10459
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>gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete sequence
          Length = 142154

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 17    atttcacacaacacaaactgct 38
             ||||||||||||||||| ||||
Sbjct: 13863 atttcacacaacacaaaatgct 13884
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>gb|BC057609.1| Mus musculus cDNA clone IMAGE:6400417, **** WARNING: chimeric clone
            ****
          Length = 4039

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 3    atatctgcattacaattt 20
            ||||||||||||||||||
Sbjct: 2231 atatctgcattacaattt 2248
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>emb|BX068704.1|CNS09P6C Single read from an extremity of a full-length cDNA clone made
          from Anopheles gambiae total adult females. 5-PRIME end
          of clone FK0AAC53AC12 of strain 6-9 of Anopheles
          gambiae (African malaria mosquito)
          Length = 1052

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 20 tcacacaacacaaactgc 37
          ||||||||||||||||||
Sbjct: 80 tcacacaacacaaactgc 63
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>emb|BX028729.1|CNS08UBX Single read from an extremity of a full-length cDNA clone made
          from Anopheles gambiae total adult females. 5-PRIME end
          of clone FK0AAA42DF07 of strain 6-9 of Anopheles
          gambiae (African malaria mosquito)
          Length = 639

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 20 tcacacaacacaaactgc 37
          ||||||||||||||||||
Sbjct: 47 tcacacaacacaaactgc 30
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>emb|BX027354.1|CNS08T9Q Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA40DH07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 743

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 20  tcacacaacacaaactgc 37
           ||||||||||||||||||
Sbjct: 181 tcacacaacacaaactgc 164
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>emb|BX019858.1|CNS08NHI Single read from an extremity of a full-length cDNA clone made
          from Anopheles gambiae total adult females. 5-PRIME end
          of clone FK0AAA3BB08 of strain 6-9 of Anopheles gambiae
          (African malaria mosquito)
          Length = 1030

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 20 tcacacaacacaaactgc 37
          ||||||||||||||||||
Sbjct: 52 tcacacaacacaaactgc 35
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>emb|BX010659.1|CNS08GDZ Single read from an extremity of a full-length cDNA clone made
          from Anopheles gambiae total adult females. 5-PRIME end
          of clone FK0AAA17AE06 of strain 6-9 of Anopheles
          gambiae (African malaria mosquito)
          Length = 944

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 20 tcacacaacacaaactgc 37
          ||||||||||||||||||
Sbjct: 77 tcacacaacacaaactgc 60
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>emb|CR854930.5| Zebrafish DNA sequence from clone CH211-268F11 in linkage group 13,
            complete sequence
          Length = 92936

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 19   ttcacacaacacaaactg 36
            ||||||||||||||||||
Sbjct: 9263 ttcacacaacacaaactg 9246
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>emb|CR788323.5| Zebrafish DNA sequence from clone DKEYP-71G11 in linkage group 2,
             complete sequence
          Length = 107248

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    tttcacacaacacaaact 35
             ||||||||||||||||||
Sbjct: 57850 tttcacacaacacaaact 57867
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>emb|BX323858.12| Zebrafish DNA sequence from clone DKEY-102F10 in linkage group 14,
              complete sequence
          Length = 184463

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 17     atttcacacaacacaaac 34
              ||||||||||||||||||
Sbjct: 152586 atttcacacaacacaaac 152569
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>gb|AC022495.17| Homo sapiens 3 BAC RP11-94I16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 156054

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     tgcattacaatttcacac 25
             ||||||||||||||||||
Sbjct: 80185 tgcattacaatttcacac 80168
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>emb|BX248113.22| Zebrafish DNA sequence from clone CH211-132F21, complete sequence
          Length = 146026

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 18     tttcacacaacacaaact 35
              ||||||||||||||||||
Sbjct: 136311 tttcacacaacacaaact 136294
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>gb|AC103727.2| Homo sapiens chromosome 18, clone RP11-189C5, complete sequence
          Length = 149383

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 9     gcattacaatttcacaca 26
             ||||||||||||||||||
Sbjct: 76246 gcattacaatttcacaca 76263
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>gb|AC160983.2| Mus musculus BAC clone RP23-335A9 from chromosome 9, complete sequence
          Length = 188085

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 22    acacaacacaaactgctc 39
             ||||||||||||||||||
Sbjct: 53753 acacaacacaaactgctc 53770
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>emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 in linkage group 17,
             complete sequence
          Length = 173690

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    tttcacacaacacaaact 35
             ||||||||||||||||||
Sbjct: 55951 tttcacacaacacaaact 55968
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>emb|BX548002.12| Zebrafish DNA sequence from clone CH211-170I2 in linkage group 25,
             complete sequence
          Length = 149569

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    atttcacacaacacaaac 34
             ||||||||||||||||||
Sbjct: 32381 atttcacacaacacaaac 32398
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>emb|BX284616.13| Zebrafish DNA sequence from clone DKEY-192I20 in linkage group 19,
              complete sequence
          Length = 223573

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     atttcacacaacacaaac 34
              ||||||||||||||||||
Sbjct: 105184 atttcacacaacacaaac 105201
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>emb|BX816818.1|CNS0AEKJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH6ZD04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1581

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 13  tacaatttcacacaacacaaac 34
           ||||||||| ||||||||||||
Sbjct: 898 tacaatttcccacaacacaaac 877
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>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 8      tgcattacaatttcacac 25
              ||||||||||||||||||
Sbjct: 397653 tgcattacaatttcacac 397636
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>gb|AC110921.9| Homo sapiens chromosome 17, clone CTD-2653B5, complete sequence
          Length = 240058

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 5      atctgcattacaatttca 22
              ||||||||||||||||||
Sbjct: 205089 atctgcattacaatttca 205072
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>emb|BX248105.5| Zebrafish DNA sequence from clone CH211-270A9, complete sequence
          Length = 158673

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 22    acacaacacaaactgctc 39
             ||||||||||||||||||
Sbjct: 16508 acacaacacaaactgctc 16491
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>ref|XM_308845.2| Anopheles gambiae str. PEST ENSANGP00000021812
           (ENSANGG00000019323), mRNA
          Length = 1541

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 20  tcacacaacacaaactgc 37
           ||||||||||||||||||
Sbjct: 182 tcacacaacacaaactgc 165
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>gb|AC004825.2|AC004825 Homo sapiens PAC clone RP1-292L20 from 14q24.3, complete sequence
          Length = 124221

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 21    cacacaacacaaactgct 38
             ||||||||||||||||||
Sbjct: 36800 cacacaacacaaactgct 36817
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>emb|AL445903.3|CNS07EEU Human chromosome 14 DNA sequence BAC R-164G17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 145556

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 21    cacacaacacaaactgct 38
             ||||||||||||||||||
Sbjct: 85491 cacacaacacaaactgct 85508
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>emb|BX663516.23| Zebrafish DNA sequence from clone DKEY-16F21 in linkage group 10,
              complete sequence
          Length = 183367

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 22     acacaacacaaactgctc 39
              ||||||||||||||||||
Sbjct: 109418 acacaacacaaactgctc 109401
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>gb|AC147636.3| Mus musculus BAC clone RP23-201C3 from 9, complete sequence
          Length = 202197

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 3     atatctgcattacaattt 20
             ||||||||||||||||||
Sbjct: 52675 atatctgcattacaattt 52692
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>emb|AL645689.11| Zebrafish DNA sequence from clone XX-BAC7CSE, complete sequence
          Length = 82848

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    atttcacacaacacaaac 34
             ||||||||||||||||||
Sbjct: 66733 atttcacacaacacaaac 66750
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>emb|BX293540.5| Zebrafish DNA sequence from clone DKEY-255N2 in linkage group 8, complete
              sequence
          Length = 181168

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 17     atttcacacaacacaaac 34
              ||||||||||||||||||
Sbjct: 124165 atttcacacaacacaaac 124148
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>gb|AC142557.3| Cercopithecus aethiops clone CH252-402M4, complete sequence
          Length = 150854

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     tgcattacaatttcacac 25
             ||||||||||||||||||
Sbjct: 12346 tgcattacaatttcacac 12329


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 443,620
Number of Sequences: 3902068
Number of extensions: 443620
Number of successful extensions: 129191
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128990
Number of HSP's gapped (non-prelim): 201
length of query: 44
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 24
effective length of database: 17,155,003,908
effective search space: 411720093792
effective search space used: 411720093792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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