ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart38c09 |
|---|---|
| Clone Library Name | barley_pub |
>RS3_ICTPU (Q90YS2) 40S ribosomal protein S3| Length = 245 Score = 141 bits (356), Expect = 9e-34 Identities = 69/87 (79%), Positives = 73/87 (83%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIM Sbjct: 130 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEE 252 L WDP GK+GP PLPD V+I PKEE Sbjct: 190 LPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>RS32_XENLA (P47835) 40S ribosomal protein S3-B (S1B)| Length = 246 Score = 140 bits (353), Expect = 2e-33 Identities = 68/87 (78%), Positives = 73/87 (83%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIM Sbjct: 130 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEE 252 L WDP GK+GP PLPD V+I PK+E Sbjct: 190 LPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>RS31_XENLA (P02350) 40S ribosomal protein S3-A (S1A)| Length = 246 Score = 140 bits (353), Expect = 2e-33 Identities = 68/87 (78%), Positives = 73/87 (83%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIM Sbjct: 130 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEE 252 L WDP GK+GP PLPD V+I PK+E Sbjct: 190 LPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>RS3_RAT (P62909) 40S ribosomal protein S3| Length = 243 Score = 140 bits (353), Expect = 2e-33 Identities = 68/87 (78%), Positives = 73/87 (83%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIM Sbjct: 130 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEE 252 L WDP GK+GP PLPD V+I PK+E Sbjct: 190 LPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>RS3_MOUSE (P62908) 40S ribosomal protein S3| Length = 243 Score = 140 bits (353), Expect = 2e-33 Identities = 68/87 (78%), Positives = 73/87 (83%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIM Sbjct: 130 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEE 252 L WDP GK+GP PLPD V+I PK+E Sbjct: 190 LPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>RS3_PONPY (Q5R465) 40S ribosomal protein S3| Length = 243 Score = 140 bits (352), Expect = 3e-33 Identities = 68/87 (78%), Positives = 73/87 (83%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIM Sbjct: 130 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEE 252 L WDP GK+GP PLPD V+I PK+E Sbjct: 190 LPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>RS3_HUMAN (P23396) 40S ribosomal protein S3| Length = 243 Score = 140 bits (352), Expect = 3e-33 Identities = 68/87 (78%), Positives = 73/87 (83%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIM Sbjct: 130 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEE 252 L WDP GK+GP PLPD V+I PK+E Sbjct: 190 LPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>RS3_BOVIN (Q3T169) 40S ribosomal protein S3| Length = 243 Score = 140 bits (352), Expect = 3e-33 Identities = 68/87 (78%), Positives = 73/87 (83%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIM Sbjct: 130 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEE 252 L WDP GK+GP PLPD V+I PK+E Sbjct: 190 LPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>RS3_AMBME (P79891) 40S ribosomal protein S3| Length = 253 Score = 139 bits (349), Expect = 6e-33 Identities = 67/87 (77%), Positives = 73/87 (83%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 G+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIM Sbjct: 130 GSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEE 252 L WDP GK+GP PLPD V+I PK+E Sbjct: 190 LAWDPSGKIGPKKPLPDHVSIVEPKDE 216
>RS3_DROME (Q06559) 40S ribosomal protein S3| Length = 246 Score = 134 bits (336), Expect = 2e-31 Identities = 64/93 (68%), Positives = 73/93 (78%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y++ A RHVLLRQGVLGIKVK+M Sbjct: 132 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVM 191 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEEDELRPP 234 L +DPK K+GP PLPD V++ PKEE P Sbjct: 192 LPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP 224
>RS3_MANSE (P48153) 40S ribosomal protein S3| Length = 243 Score = 130 bits (326), Expect = 3e-30 Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 1/108 (0%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y++ A RHVLLRQGVLGIKVKIM Sbjct: 131 GARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIM 190 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEED-ELRPPALIEA*TPSSASRP 192 L WD +GK GP P PD + + PK+E L P + I + P+ +P Sbjct: 191 LPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEPTSDIRSLAPAPLPQP 238
>RS3_YEAST (P05750) 40S ribosomal protein S3 (YS3) (RP13)| Length = 239 Score = 122 bits (306), Expect = 6e-28 Identities = 63/95 (66%), Positives = 75/95 (78%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID A RHVL+RQGVLGIKVKIM Sbjct: 129 GAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKVKIM 188 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEEDELRPPAL 228 D K + GP LPD VTI PKEE+ + P++ Sbjct: 189 RD-PAKSRTGPKA-LPDAVTIIEPKEEEPILAPSV 221
>RS3_CAEEL (P48152) 40S ribosomal protein S3| Length = 247 Score = 120 bits (301), Expect = 2e-27 Identities = 61/87 (70%), Positives = 69/87 (79%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQGV+GIKVKIM Sbjct: 132 GAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIM 191 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEE 252 L +DP+G+ GP LPD V I P+EE Sbjct: 192 LPYDPRGQNGPRNALPDHVQIVEPQEE 218
>RS3_SCHPO (O60128) 40S ribosomal protein S3| Length = 249 Score = 117 bits (294), Expect = 1e-26 Identities = 59/93 (63%), Positives = 71/93 (76%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKGCEV++SGKLRA RAKSMKF DG+MI SGQP ++ID+A RHVLLRQGVLG+KVKIM Sbjct: 132 GAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGVLGVKVKIM 191 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEEDELRPP 234 L P+ K LPD+V + PKEE+ + P Sbjct: 192 L---PEPKTRQKKSLPDIVVVLDPKEEEPITKP 221
>RS3_ENCCU (Q8SQM3) 40S ribosomal protein S3| Length = 228 Score = 102 bits (254), Expect = 6e-22 Identities = 48/85 (56%), Positives = 64/85 (75%) Frame = -1 Query: 509 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIML 330 A+GC++IVSGKL+ QRAKS+KF+DG +I SG V +YI+ V +QGV+GI+V+IML Sbjct: 142 AQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIML 201 Query: 329 DWDPKGKLGPTTPLPDLVTIHPPKE 255 +DP+G LGP PLPD +TI P E Sbjct: 202 PYDPEGVLGPNYPLPDRITILEPSE 226
>RS3_METBF (Q46GA1) 30S ribosomal protein S3P| Length = 311 Score = 63.9 bits (154), Expect = 2e-10 Identities = 43/119 (36%), Positives = 57/119 (47%), Gaps = 12/119 (10%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA GCEV++SGKL R++ KF DGY+ SG PV+E +D + + G LG KV+I Sbjct: 124 GALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVDEVVDEGFAVAIKKLGTLGCKVRI- 182 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKE------EDELRPPAL------IEA*TPSSASRP 192 + P LPD T P E E PA +EA SA++P Sbjct: 183 --------IQPGVVLPDSYTTTEPSEPVTEPVEKPAEKPAAKPAEKPVEAPKKESAAKP 233
>RS3_METMA (Q8PV44) 30S ribosomal protein S3P| Length = 307 Score = 62.4 bits (150), Expect = 7e-10 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 3/110 (2%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA GCEV++SGKL R++ KF DGY+ SG PV E +D + + G LG KV+I+ Sbjct: 124 GALGCEVVISGKLTGARSRVEKFVDGYIKHSGHPVEEVVDEGFAVAIKKLGTLGCKVRII 183 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKE---EDELRPPALIEA*TPSSASRP 192 P L + + + V I P E E ++ PA+ + A P Sbjct: 184 ---QPGVVLPDSYKVRESVEIEEPAEKPAEKQVEKPAVAPKKEAAKAKAP 230
>RS3_METAC (Q8TRU1) 30S ribosomal protein S3P| Length = 318 Score = 61.2 bits (147), Expect = 2e-09 Identities = 34/92 (36%), Positives = 50/92 (54%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA GCEV++SGKL R++ KF DGY+ SG PV E +D + + G LG KV+I+ Sbjct: 124 GALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVEEVVDEGFAVAVKKLGTLGCKVRII 183 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEEDELRP 237 P L + + + V + P E+ +P Sbjct: 184 ---QPGVVLPDSYKVRESVEVEEPAEKPAEKP 212
>RS3_PYRAB (Q9V1U1) 30S ribosomal protein S3P| Length = 210 Score = 60.8 bits (146), Expect = 2e-09 Identities = 33/90 (36%), Positives = 47/90 (52%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM Sbjct: 124 GARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM 183 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEEDEL 243 P LPD + I E+E+ Sbjct: 184 ---------PPDARLPDEIEIIEKPVEEEV 204
>RS3_PYRHO (O59424) 30S ribosomal protein S3P| Length = 210 Score = 60.5 bits (145), Expect = 3e-09 Identities = 33/90 (36%), Positives = 47/90 (52%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM Sbjct: 124 GARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM 183 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEEDEL 243 P LPD + I E+E+ Sbjct: 184 ---------PPDARLPDEIEIVEKPAEEEV 204
>RS3_METKA (Q8TX35) 30S ribosomal protein S3P| Length = 227 Score = 60.1 bits (144), Expect = 3e-09 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKG +I+SGKL RA++ KF +G + G+P +EY+ + + G +G+ V+IM Sbjct: 132 GAKGAMIILSGKLIGARARTEKFMEGAVKYCGEPGDEYMIEGYVQAVTKPGAIGVTVRIM 191 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKE-EDELR 240 P LPD + I PP+E EDEL+ Sbjct: 192 ---------PPDVELPDELEIRPPEEVEDELK 214
>RS3_PYRFU (Q8U004) 30S ribosomal protein S3P| Length = 210 Score = 59.7 bits (143), Expect = 5e-09 Identities = 33/90 (36%), Positives = 47/90 (52%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV IM Sbjct: 124 GARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM 183 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEEDEL 243 P LPD + I E+E+ Sbjct: 184 ---------PPGARLPDEIEIIEKPVEEEV 204
>RS3_METTH (O26116) 30S ribosomal protein S3P| Length = 258 Score = 59.7 bits (143), Expect = 5e-09 Identities = 33/85 (38%), Positives = 47/85 (55%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA+G EV +SGK+R R+ + KF DGY+ G+P +++ V L+ GVLG+ V+IM Sbjct: 123 GAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVLGVYVRIM 182 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPK 258 P LPD V I P+ Sbjct: 183 ---------PPDVVLPDKVEIEDPR 198
>RS3_METJA (P54034) 30S ribosomal protein S3P| Length = 208 Score = 58.5 bits (140), Expect = 1e-08 Identities = 36/91 (39%), Positives = 49/91 (53%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKG VI+SGKL +RA++ KF GYM G+P E +D + GV+G+ VKIM Sbjct: 123 GAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTVKIM 182 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEEDELR 240 P LPD + I KE+ E++ Sbjct: 183 ---------RPDVLLPDEIII---KEDAEVK 201
>RS3_PYRKO (Q5JDH5) 30S ribosomal protein S3P| Length = 209 Score = 58.5 bits (140), Expect = 1e-08 Identities = 32/88 (36%), Positives = 45/88 (51%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA+G E+ +SGKL +RAKS++F GY+ G P + L+ GV+G+KV IM Sbjct: 124 GARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSRGYAQAQLKLGVIGVKVSIM 183 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEED 249 P LPD + I EE+ Sbjct: 184 ---------PPDAKLPDEIEIKEIVEEE 202
>RS3_METMP (Q6LXE7) 30S ribosomal protein S3P| Length = 211 Score = 58.5 bits (140), Expect = 1e-08 Identities = 31/81 (38%), Positives = 46/81 (56%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ G++G+ VKIM Sbjct: 123 GAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIM 182 Query: 332 LDWDPKGKLGPTTPLPDLVTI 270 P LPD + I Sbjct: 183 ---------RPDVSLPDEIVI 194
>RS3_SULAC (Q4JB46) 30S ribosomal protein S3P| Length = 231 Score = 57.0 bits (136), Expect = 3e-08 Identities = 29/59 (49%), Positives = 40/59 (67%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GA G EVIVSGKL ++RAK K K+G + SGQ + + ID A+ +L+ GV G++V I Sbjct: 125 GAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLKPGVYGVEVVI 183
>RS3_SULSO (Q9UXA0) 30S ribosomal protein S3P| Length = 229 Score = 55.8 bits (133), Expect = 7e-08 Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA G E+I+SGKL +RA+ K K+G + SGQ + + ID A+ +L+ G+ G++V I Sbjct: 125 GALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVVIT 184 Query: 332 --LDWDPKGKLGPTTPLPDLVTI 270 L + K L + +P V++ Sbjct: 185 KPLKIEDKINLKESPSVPQEVSV 207
>RS3_HALMA (P20281) 30S ribosomal protein S3P (HmaS3) (HS1)| Length = 304 Score = 54.7 bits (130), Expect = 1e-07 Identities = 26/77 (33%), Positives = 44/77 (57%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA G E+++SGK+ R++ KF GY+ +G+P E +D+ V +++ G +G++VKI Sbjct: 124 GALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRVKI- 182 Query: 332 LDWDPKGKLGPTTPLPD 282 + P LPD Sbjct: 183 --------IPPNAELPD 191
>RS3_SULTO (Q975I7) 30S ribosomal protein S3P| Length = 225 Score = 54.3 bits (129), Expect = 2e-07 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 10/77 (12%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKV--- 342 GA G EVI+SGKL ++RAK K K+G + SG +++ +D AV +L+ GV G+++ Sbjct: 125 GALGAEVIISGKLTSERAKYEKLKEGVVYKSGAFLDKIVDRAVAIAMLKPGVYGVEILIT 184 Query: 341 -------KIMLDWDPKG 312 KI L PKG Sbjct: 185 KPMKSVDKIELREQPKG 201
>RS3_NATPD (Q3IMY2) 30S ribosomal protein S3P| Length = 305 Score = 53.9 bits (128), Expect = 2e-07 Identities = 30/98 (30%), Positives = 54/98 (55%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA G E+I+SGK+ R++ KF GY+ +G+P +D+ V +++ G +G++VKI+ Sbjct: 124 GALGAEIILSGKVTGARSRVEKFNRGYIKHNGEPAESIVDSGVGTAVMKLGTIGVQVKII 183 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEEDELRPPALIEA 219 P+ +L + + + + EE E L+EA Sbjct: 184 ---PPEAELPDDFEVYEDIEVEDFVEEPEGDVEELLEA 218
>RS3_AERPE (Q9YF78) 30S ribosomal protein S3P| Length = 246 Score = 53.1 bits (126), Expect = 4e-07 Identities = 27/65 (41%), Positives = 40/65 (61%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA G E+ +SGKL ++RA+ KFK G + SG V+E +D A + L +GV+G+ V I+ Sbjct: 126 GALGVEITISGKLTSERARFEKFKAGKVYKSGHKVDELVDRASAYARLPKGVIGVDVIIV 185 Query: 332 LDWDP 318 P Sbjct: 186 KPGKP 190
>RS3_ARCFU (O28360) 30S ribosomal protein S3P| Length = 229 Score = 52.8 bits (125), Expect = 6e-07 Identities = 27/77 (35%), Positives = 42/77 (54%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKGCE+ +SGKL ++RA++ KF G ++ +G P + + + GVLG+ V+I Sbjct: 123 GAKGCEIEISGKLVSERARTEKFVAGTIVHTGDPAESMVQKGFDIAIKKLGVLGVSVRI- 181 Query: 332 LDWDPKGKLGPTTPLPD 282 + P LPD Sbjct: 182 --------IPPDVTLPD 190
>RS3_HALSA (P15009) 30S ribosomal protein S3P (HS4) (HHAS3)| Length = 302 Score = 51.2 bits (121), Expect = 2e-06 Identities = 27/90 (30%), Positives = 45/90 (50%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA G E+++SGK+ R + KF GY+ +G+P E +D +++ G +G+ VKI Sbjct: 124 GALGAEIVLSGKVTGNRGRVEKFNRGYIKHNGEPAEEIVDHGKGVAVMKLGTIGVNVKI- 182 Query: 332 LDWDPKGKLGPTTPLPDLVTIHPPKEEDEL 243 + P LPD I + ++L Sbjct: 183 --------IPPNAELPDDFEIQEDADIEDL 204
>RS3_PYRAE (Q8ZWI0) 30S ribosomal protein S3P| Length = 218 Score = 50.4 bits (119), Expect = 3e-06 Identities = 26/59 (44%), Positives = 36/59 (61%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GAKG E++VSGKL +RA+ K G + G + AV HVLL+ G+ GI+V+I Sbjct: 134 GAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>RS3_THEAC (Q9HIR5) 30S ribosomal protein S3P| Length = 225 Score = 45.4 bits (106), Expect = 9e-05 Identities = 28/81 (34%), Positives = 43/81 (53%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GAKG + +SGK+ +RA+ KF G + SG+P ++ + L+ G+LG+ VKI Sbjct: 123 GAKGVLIKISGKISGERARYQKFIYGNVKYSGEPGSKGMITGFSTAKLKVGILGVTVKI- 181 Query: 332 LDWDPKGKLGPTTPLPDLVTI 270 L P LPD+ +I Sbjct: 182 --------LNPEYKLPDVFSI 194
>RS3_PICTO (Q6L1C1) 30S ribosomal protein S3P| Length = 217 Score = 44.3 bits (103), Expect = 2e-04 Identities = 26/89 (29%), Positives = 43/89 (48%) Frame = -1 Query: 509 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIML 330 A G + + GK+ +RA++ KF G + SG+P ++ L+ G++G+ V+I Sbjct: 124 APGVLIRIGGKISGERARAQKFMFGKIKYSGEPARSGVEYGFSEAKLKTGIIGVSVRI-- 181 Query: 329 DWDPKGKLGPTTPLPDLVTIHPPKEEDEL 243 L LPD + I P K E E+ Sbjct: 182 -------LKSNYRLPDDIEIKPVKIEKEV 203
>RS3_THEVO (Q97BX1) 30S ribosomal protein S3P| Length = 225 Score = 43.9 bits (102), Expect = 3e-04 Identities = 27/81 (33%), Positives = 43/81 (53%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM 333 GA+G + +SGK+ +RA+ KF G + SG+P ++ + L+ G+LG+ VKI Sbjct: 123 GARGVLIKISGKISGERARYQKFIYGNVKYSGEPGSKGMLVGFSTAKLKVGILGVTVKI- 181 Query: 332 LDWDPKGKLGPTTPLPDLVTI 270 L P LPD+ +I Sbjct: 182 --------LNPEYKLPDVFSI 194
>RS3_FRATT (Q5NHW2) 30S ribosomal protein S3| Length = 222 Score = 34.7 bits (78), Expect = 0.16 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GAKG +++VSG+L A+ A+S +DG + Q +D A L GV+G+KV Sbjct: 145 GAKGIKIMVSGRLGGAEIARSEWARDGRV--PLQTFRADVDYATAEALTTYGVIGVKV-- 200 Query: 335 MLDWDPKGKLGP 300 W KG++ P Sbjct: 201 ---WIYKGEILP 209
>RS3_COLP3 (Q487Z9) 30S ribosomal protein S3| Length = 231 Score = 33.5 bits (75), Expect = 0.35 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GAKG +V VSG+L A A++ +++G + + ID A+ GV+GIKV Sbjct: 145 GAKGIKVQVSGRLGGADIARAEWYREGRV--PLHTLRADIDYAIARGNTTYGVIGIKV-- 200 Query: 335 MLDWDPKGKLGPTTPLPDLVTIHPPKEEDELRP 237 W KG++ PL V PK + +P Sbjct: 201 ---WIFKGEIIGNMPLQAEVPAAKPKRKTNRKP 230
>IL2RB_PANTR (Q38J84) Interleukin-2 receptor beta chain precursor (IL-2| receptor) (P70-75) (High affinity IL-2 receptor beta subunit) (CD122 antigen) Length = 551 Score = 33.5 bits (75), Expect = 0.35 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Frame = -1 Query: 350 IKVKIMLDWDPKGKLGPTTP-LPDLVTIHPPKE 255 ++ ++ DWDP+ LGP TP +PDLV PP E Sbjct: 459 LQERVPRDWDPQ-PLGPPTPGVPDLVDFQPPPE 490
>IL2RB_HUMAN (P14784) Interleukin-2 receptor beta chain precursor (IL-2| receptor) (P70-75) (p75) (High affinity IL-2 receptor beta subunit) (CD122 antigen) Length = 551 Score = 33.5 bits (75), Expect = 0.35 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Frame = -1 Query: 350 IKVKIMLDWDPKGKLGPTTP-LPDLVTIHPPKE 255 ++ ++ DWDP+ LGP TP +PDLV PP E Sbjct: 459 LQERVPRDWDPQ-PLGPPTPGVPDLVDFQPPPE 490
>RT03_ORYSA (P46773) Mitochondrial ribosomal protein S3| Length = 538 Score = 32.7 bits (73), Expect = 0.60 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 G +G + SG+L A+ A++ K G +S N+ ID A+ V R G+ G+KV+I Sbjct: 464 GVEGIRICCSGRLGGAEIARTECGKYGK--TSCNVFNQKIDYALAEVSTRNGISGVKVRI 521 Query: 335 MLDWDPKGK 309 + KG+ Sbjct: 522 SYSQNKKGR 530
>RS3_ANAAB (P41119) 30S ribosomal protein S3| Length = 251 Score = 32.0 bits (71), Expect = 1.0 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GAKG + ++SG+L A+ A+S + +G + Q + +D AV G LGIKV Sbjct: 150 GAKGAKTLISGRLGGAEIARSEGYNEGQV--PLQTLRADVDYAVAEAHTTYGKLGIKV-- 205 Query: 335 MLDWDPKGKLGPTTP 291 W KG++ P Sbjct: 206 ---WIYKGEVFDVQP 217
>RS3_MYCGA (O52338) 30S ribosomal protein S3| Length = 262 Score = 32.0 bits (71), Expect = 1.0 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GAKG +V+VSG+L + A+ + +G + S + ID A+ + GV+G+KV I Sbjct: 147 GAKGIKVLVSGRLNGVEIARDKMYIEGNVTLS--TLRTDIDYALEEAQMSYGVIGVKVWI 204
>RT03_ARATH (Q95749) Mitochondrial ribosomal protein S3| Length = 556 Score = 31.6 bits (70), Expect = 1.3 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Frame = -1 Query: 512 GAKGCEVIVSGKLR--AQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVK 339 G +G + SG+L+ A++A++ +K + +S N ID A V R G+LG+KV Sbjct: 481 GVEGIRICFSGRLKDAAEKAQTKCYK--HRKTSCNVFNHKIDYAPVEVFTRYGILGVKVW 538 Query: 338 I 336 I Sbjct: 539 I 539
>RT03_MAIZE (P27928) Mitochondrial ribosomal protein S3| Length = 559 Score = 31.6 bits (70), Expect = 1.3 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 G +G + SG+L A+ A++ K G +S N+ ID A V R G+ G+KV+I Sbjct: 485 GVEGIRICCSGRLGGAEIARTECGKYGK--TSCNVFNQKIDYAPAEVSTRDGISGVKVRI 542 Query: 335 MLDWDPKGK 309 + KG+ Sbjct: 543 SYSQNKKGR 551
>HXADB_BRARE (P79724) Homeobox protein Hox-A13b (Hox-A13)| Length = 285 Score = 31.6 bits (70), Expect = 1.3 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -1 Query: 512 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAV 384 G K + VSG+ RAK F GY + QPV Y+D V Sbjct: 115 GEKYMDTSVSGEEFPSRAKEFAFYQGYSSALTQPVPSYLDVPV 157
>RS3_BLOFL (Q7VQE2) 30S ribosomal protein S3| Length = 235 Score = 30.8 bits (68), Expect = 2.3 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%) Frame = -1 Query: 512 GAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDAAVRHVLLRQGVLGIK 345 GAKG +V VSG+L A+ A++ +++G + P++ + ID ++ GV+G+K Sbjct: 145 GAKGIKVEVSGRLSGAEIARTEWYREGRV-----PLHTFRADIDYSLSEAHTSYGVVGVK 199 Query: 344 VKIMLDWDPKGKLGPTTPLPDLVTIHPPKEEDEL 243 V W KG+ + D V H K +D L Sbjct: 200 V-----WVFKGE------ILDKVLFHIDKSKDSL 222
>CBID_CHRVO (Q7NXR0) Putative cobalt-precorrin-6A synthase [deacetylating] (EC| 2.1.1.-) Length = 377 Score = 30.4 bits (67), Expect = 3.0 Identities = 23/56 (41%), Positives = 27/56 (48%) Frame = +3 Query: 204 TTGSLGLNQSRGAQLVLLLRGVDGDEVRQGGGRAKFALGVPVKHNLHLDTKNALSE 371 TTGS + A L+LLL GVD DEV F L VPV+ LD +E Sbjct: 23 TTGSCATAAVKAA-LMLLLDGVDADEVFISLPDPDFYLAVPVESVAWLDENTVRAE 77
>RS3_ACHLA (P29223) 30S ribosomal protein S3| Length = 265 Score = 29.6 bits (65), Expect = 5.0 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GAKG +VSG+L A+ A+S + +G + + +D A G+LGIKV I Sbjct: 149 GAKGIRTLVSGRLGGAEMARSEGYSEGRV--PLHTLRADVDYATAEASTTYGILGIKVWI 206
>RS3_VIBF1 (Q5E8A9) 30S ribosomal protein S3| Length = 232 Score = 29.6 bits (65), Expect = 5.0 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 1/92 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GAKG +V VSG+L A+ A+S +++G + + ID A + GV+G+KV Sbjct: 145 GAKGIKVEVSGRLGGAEIARSEWYREGRV--PLHTLRADIDYATSSAHTQYGVIGVKV-- 200 Query: 335 MLDWDPKGKLGPTTPLPDLVTIHPPKEEDELR 240 W KG++ P + V K + + R Sbjct: 201 ---WIFKGEVLGGMPAANAVEPKADKPKKQRR 229
>IL2RB_MACFA (Q38J85) Interleukin-2 receptor beta chain precursor (IL-2| receptor) (P70-75) (High affinity IL-2 receptor beta subunit) (CD122 antigen) Length = 551 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Frame = -1 Query: 350 IKVKIMLDWDPKGKLGPTTP-LPDLVTIHPPKE 255 ++ ++ DWDP+ LGP TP +PDLV P E Sbjct: 459 LQERVPRDWDPQP-LGPPTPGVPDLVDFQPRPE 490
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 29.6 bits (65), Expect = 5.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 Query: 320 PKGKLGPTTPLPDLVTIHPPKEEDELRPPAL 228 P ++ +PLP + + PP EE L PPAL Sbjct: 646 PPPEVSRLSPLPVVSRLSPPPEESPLSPPAL 676
>RS3_ACHSP (P41118) 30S ribosomal protein S3| Length = 248 Score = 29.6 bits (65), Expect = 5.0 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKV 342 GAKG + +VSG+L A+ A+S + +G + + +D A GVLGIKV Sbjct: 149 GAKGVKTLVSGRLGGAEMARSEGYSEGRV--PLHTLRADVDYATAEAHTTYGVLGIKV 204
>RT03_PETHY (Q04716) Mitochondrial ribosomal protein S3| Length = 562 Score = 29.3 bits (64), Expect = 6.6 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 G +G + SG+L A+ A++ K G +S N+ ID A V R G+ G+KV I Sbjct: 488 GVEGIRICCSGRLEGAEIARTECGKYGK--TSRNVFNQKIDYAPAEVSTRYGISGVKVWI 545 Query: 335 MLDWDPKGK 309 KG+ Sbjct: 546 SYSKKKKGR 554
>HXA13_CHICK (Q90X25) Homeobox protein Hox-A13| Length = 290 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -1 Query: 506 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAV 384 K + VSG+ RAK F GY QPV Y+D V Sbjct: 117 KYMDTSVSGEEFTSRAKEFAFYQGYAAGPYQPVPGYLDVPV 157
>RS3_NEIMB (P66551) 30S ribosomal protein S3| Length = 230 Score = 29.3 bits (64), Expect = 6.6 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GAKG +++ SG+L A A+S +++G + N +D A GVLG+KV + Sbjct: 145 GAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRAN--VDYATSEAHTTYGVLGLKVWV 202 Query: 335 MLDWDPK 315 + + K Sbjct: 203 YTEGNIK 209
>RS3_NEIMA (P66550) 30S ribosomal protein S3| Length = 230 Score = 29.3 bits (64), Expect = 6.6 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GAKG +++ SG+L A A+S +++G + N +D A GVLG+KV + Sbjct: 145 GAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRAN--VDYATSEAHTTYGVLGLKVWV 202 Query: 335 MLDWDPK 315 + + K Sbjct: 203 YTEGNIK 209
>RS3_NEIG1 (Q5F5T3) 30S ribosomal protein S3| Length = 230 Score = 29.3 bits (64), Expect = 6.6 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GAKG +++ SG+L A A+S +++G + N +D A GVLG+KV + Sbjct: 145 GAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRAN--VDYATSEAHTTYGVLGLKVWV 202 Query: 335 MLDWDPK 315 + + K Sbjct: 203 YTEGNIK 209
>RS3_LEGPL (Q5WZK6) 30S ribosomal protein S3| Length = 218 Score = 29.3 bits (64), Expect = 6.6 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Frame = -1 Query: 512 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDAAVRHVLLRQGVLGIK 345 GAKG ++ VSG+L A+ A+S +++G + P++ + ID G++G+K Sbjct: 144 GAKGIKICVSGRLGGAEIARSEWYREGRV-----PLHTFRADIDYGTAESKTTYGIIGVK 198 Query: 344 VKIMLDWDPKGKLGP 300 V W KG++ P Sbjct: 199 V-----WIFKGEILP 208
>RS3_LEGPH (Q5ZYN7) 30S ribosomal protein S3| Length = 218 Score = 29.3 bits (64), Expect = 6.6 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Frame = -1 Query: 512 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDAAVRHVLLRQGVLGIK 345 GAKG ++ VSG+L A+ A+S +++G + P++ + ID G++G+K Sbjct: 144 GAKGIKICVSGRLGGAEIARSEWYREGRV-----PLHTFRADIDYGTAESKTTYGIIGVK 198 Query: 344 VKIMLDWDPKGKLGP 300 V W KG++ P Sbjct: 199 V-----WIFKGEILP 208
>RS3_LEGPA (Q5X853) 30S ribosomal protein S3| Length = 218 Score = 29.3 bits (64), Expect = 6.6 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%) Frame = -1 Query: 512 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDAAVRHVLLRQGVLGIK 345 GAKG ++ VSG+L A+ A+S +++G + P++ + ID G++G+K Sbjct: 144 GAKGIKICVSGRLGGAEIARSEWYREGRV-----PLHTFRADIDYGTAESKTTYGIIGVK 198 Query: 344 VKIMLDWDPKGKLGP 300 V W KG++ P Sbjct: 199 V-----WIFKGEILP 208
>TBX6_MOUSE (P70327) T-box transcription factor TBX6 (T-box protein 6)| Length = 540 Score = 28.9 bits (63), Expect = 8.6 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = -1 Query: 329 DWDPKGKLGPTTPLPDLVTIHP 264 DW+P GK P LPD V IHP Sbjct: 157 DWEPSGKAEPR--LPDRVYIHP 176
>RS3_VIBVY (Q7MPI2) 30S ribosomal protein S3| Length = 233 Score = 28.9 bits (63), Expect = 8.6 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GAKG +V VSG+L A+ A+S +++G + + ID A GV+GIKV Sbjct: 145 GAKGIKVEVSGRLGGAEIARSEWYREGRV--PLHTLRADIDYATSSAHTTYGVIGIKV-- 200 Query: 335 MLDWDPKGKL 306 W KG++ Sbjct: 201 ---WIFKGEI 207
>RS3_VIBVU (Q8DE45) 30S ribosomal protein S3| Length = 233 Score = 28.9 bits (63), Expect = 8.6 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Frame = -1 Query: 512 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 336 GAKG +V VSG+L A+ A+S +++G + + ID A GV+GIKV Sbjct: 145 GAKGIKVEVSGRLGGAEIARSEWYREGRV--PLHTLRADIDYATSSAHTTYGVIGIKV-- 200 Query: 335 MLDWDPKGKL 306 W KG++ Sbjct: 201 ---WIFKGEI 207 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,107,078 Number of Sequences: 219361 Number of extensions: 1309336 Number of successful extensions: 3768 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 3653 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3761 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
