>PPOX_MOUSE (P51175) Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO)|
          Length = 477

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = +1

Query: 316 GCHRRRPSRFLAAKGLLHPLPPCAATSIRGWLRPSP 423
           G H    +RFL   G LHPLP    + +RG LRPSP
Sbjct: 89  GDHPAAQNRFLYVGGTLHPLP----SGLRGLLRPSP 120

>PPOX_MACFA (Q60HD5) Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO)|
          Length = 477

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 18/36 (50%), Positives = 20/36 (55%)
 Frame = +1

Query: 316 GCHRRRPSRFLAAKGLLHPLPPCAATSIRGWLRPSP 423
           G H    +RFL   G LH LP    T +RG LRPSP
Sbjct: 89  GDHPAAQNRFLYVGGALHALP----TGLRGLLRPSP 120

>PPOX_HUMAN (P50336) Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO)|
          Length = 477

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 18/36 (50%), Positives = 20/36 (55%)
 Frame = +1

Query: 316 GCHRRRPSRFLAAKGLLHPLPPCAATSIRGWLRPSP 423
           G H    +RFL   G LH LP    T +RG LRPSP
Sbjct: 89  GDHPAAQNRFLYVGGALHALP----TGLRGLLRPSP 120

>PLSB_SPIOL (Q43869) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 472

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 318 LPSKAPLTISRCK-RPSSSFATLCSNFHSRLAAAQPRKSYILRLCLSMALISSS 476
           L S AP  +  CK R SSSF+T  S+  S  +A   R+S+  R   S+    SS
Sbjct: 4   LSSSAPPVLEVCKDRVSSSFSTSSSSSSSAFSAVVFRRSFFTRFNSSLICCCSS 57

>UL17_HHV11 (P10201) Protein UL17|
          Length = 703

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 300 CRRSNRLPSKAPLTISRCKRPSSSFATLCSNFHSRL 407
           CR    +PS AP  +     P  S+A LC  F+ RL
Sbjct: 622 CRFMEAVPSTAPRRVCEQYLPGESYAYLCLGFNRRL 657

>TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnormal gonad|
            development protein 2)
          Length = 2032

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = +3

Query: 225  RCFINDTRSRLRAVHCRIQEDFLLSCRRSNRLPSKAPLTISRCKRPS 365
            R  IND  SRL +V     E  +L C R+    + AP  I RC  PS
Sbjct: 1688 RDVINDVESRLASVEKAQNE--ILECVRALLNQNNAPTAIGRCFSPS 1732

>ARHG6_RAT (Q5XXR3) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6)
          Length = 772

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +3

Query: 264 VHCRIQEDFLLSCRRSNRLPSKAPLTISRCKRPSSSFATLCSNFHSRLAAAQPR 425
           VHC   +DF     + NRL +K P + S   + SSS    CS   S  +  QPR
Sbjct: 528 VHCNNNQDFQEWMEQLNRL-TKGPASCSSLSKTSSS---SCSTHSSFSSTGQPR 577

>XERC_NEIMA (Q9JW14) Tyrosine recombinase xerC|
          Length = 305

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
 Frame = +1

Query: 211 QISSADVS*TTLGLDCARFTAAFRKISCSPAGARTGCHR----RRPSRFLAAKGLLHPLP 378
           Q+ S D      GL    FTAA R++S     ART   +    R+   +L  +GLLH  P
Sbjct: 43  QMPSEDAGGVPQGLSQRDFTAALRRLSQRGLNARTLARKLSSWRQYCAWLVKRGLLHTDP 102

>CS015_MACFA (Q4R6B2) Protein C19orf15 homolog precursor|
          Length = 1159

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 459 PCLNTTVICMISWAGPQPTSNGSCCTR 379
           PC+   V C +SW  P P  NGS  TR
Sbjct: 158 PCIAEEV-CSMSWYTPMPIKNGSVVTR 183

>COBD_LEPIN (Q8EXQ8) Cobalamin biosynthesis protein cobD|
          Length = 315

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 466 INAMLKHNRNMYDFLGWAAANLEWKLLHK-VAKDEEGLLQREIVRGAFDGS 317
           I  M+ H++ +YD L      L  K + K VA+D E L + EI+R   + +
Sbjct: 94  IRDMIDHSKEVYDALVQTNLPLARKKVSKIVARDTENLSESEIIRACVEST 144

>COBD_LEPIC (Q75FR2) Cobalamin biosynthesis protein cobD|
          Length = 315

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 466 INAMLKHNRNMYDFLGWAAANLEWKLLHK-VAKDEEGLLQREIVRGAFDGS 317
           I  M+ H++ +YD L      L  K + K VA+D E L + EI+R   + +
Sbjct: 94  IRDMIDHSKEVYDALVQTNLPLARKKVSKIVARDTENLSESEIIRACVEST 144

>HYD_DROME (P51592) Ubiquitin--protein ligase hyd (EC 6.3.2.-) (Protein|
            hyperplastic discs)
          Length = 2885

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
 Frame = +3

Query: 105  IPVPNMKT-DENV*AAVNGPSTSYSTYTQLKLQGGFSNFKCRCFINDTRSRLRAVHCRIQ 281
            +P+ + KT D NV     G ST  + Y QLK + G  +FK     +  +S+   V     
Sbjct: 2122 VPIDSSKTGDGNVTNKAEG-STDSNIYVQLKKKQGSDDFKSHKEADGNQSKYEKVVLMET 2180

Query: 282  EDFLLSCRRSNR-LPSKAPLTISRCKRPSSSFAT 380
            +D L S  +S   L +  P  I    + S S AT
Sbjct: 2181 DDSLPSTSKSTEALMATRPEVIIAPNKASVSPAT 2214

>SAP1_YEAST (P39955) Protein SAP1|
          Length = 897

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 124 RQMKMFRPP*TGRALLIRRTHNSNYREAFQISSADVS*TTLG 249
           R M +F PP TG+ +L R     ++   F IS++ ++   LG
Sbjct: 639 RGMLLFGPPGTGKTMLARAVATESHSTFFSISASSLTSKYLG 680

>SSB1_STRCO (Q9KYI9) Single-stranded DNA-binding protein 1 (SSB 1)|
           (Helix-destabilizing protein 1)
          Length = 156

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 190 SNYREAFQISSADVS*TTLGLDCARFTAAFRKISCSPA 303
           ++ RE    +SAD+    +G D AR TAAFR+ + + A
Sbjct: 85  TDVREGQSRTSADIDAVAIGHDLARGTAAFRRTARTEA 122

>EIL2_ARATH (O23115) ETHYLENE-INSENSITIVE3-like 2 protein|
          Length = 518

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 59  TKYPVHLLCATNNSTNSSSKYEDR*KCLGRRKRAEHFLFDVHTTQTT 199
           T Y V L+  T+ +     ++E+   C+ +RK  E F   +H T  T
Sbjct: 336 TDYDVELIGGTHRTNQQYPEFENNYNCVYKRKFEEDFGMPMHPTLLT 382

>ESCO2_HUMAN (Q56NI9) N-acetyltransferase ESCO2 (EC 2.3.1.-) (Establishment of|
           cohesion 1 homolog 2) (ECO1 homolog 2)
          Length = 601

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +3

Query: 219 KCRCFINDTRSRLRAVHCRIQEDFLLSCRRS---NRLPS 326
           K  CF  ++      +HC  QE F+LS  ++   NRLPS
Sbjct: 32  KKHCFYQNSDKNEENLHCSQQEHFVLSALKTTEINRLPS 70


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,450,862
Number of Sequences: 219361
Number of extensions: 1564560
Number of successful extensions: 4460
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4459
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)