>gb|BT009058.1| Triticum aestivum clone wdr1f.pk003.b21:fis, full insert mRNA
           sequence
          Length = 1157

 Score =  347 bits (175), Expect = 2e-92
 Identities = 208/219 (94%)
 Strand = Plus / Minus

                                                                       
Query: 266 tcactgccgcattcaggaagatttcttgctctcctgcaggcgctcgaacaggctgccatc 325
           |||||||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 884 tcactgccacattcaggtagatttcttgctttcctgcagacgctcgaacaggctgccatc 825

                                                                       
Query: 326 gaaggcgcccctcacgatttctcgctgcaaaaggccttcttcatcctttgccaccttgtg 385
           ||||||||||| |||||||||||||||||||| |||||| | ||||||||||||||||||
Sbjct: 824 gaaggcgccccgcacgatttctcgctgcaaaaagccttcgttatcctttgccaccttgtg 765

                                                                       
Query: 386 cagcaacttccattcgaggttggctgcggcccagcccaggaaatcatacatattacggtt 445
           |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 764 cagcaacttccattcgaggttggccgcggcccagcccaggaaatcatacatattgcggtt 705

                                                  
Query: 446 gtgtttaagcatggcgttaatctcatcttctgacaaagc 484
           || ||||||||||||||||||||||||||||||||||||
Sbjct: 704 gtatttaagcatggcgttaatctcatcttctgacaaagc 666



 Score =  188 bits (95), Expect = 1e-44
 Identities = 187/214 (87%), Gaps = 9/214 (4%)
 Strand = Plus / Minus

                                                                        
Query: 21   atattatgcgaggtactgatgattcaagagtgcacattaccaagtacc-ctgtacacctt 79
            ||||||||||||||| |||||||||| ||||||||||||| |||| || |||||||||||
Sbjct: 1111 atattatgcgaggtaatgatgattcacgagtgcacattac-aagttccactgtacacctt 1053

                                                                        
Query: 80   ctatgtgctaccaataacagtacaaattccagttccaaatatgaagacagatgaaaatgt 139
            || || ||||||||||| | ||||||||||||||| |||||  ||  || ||||||||||
Sbjct: 1052 ctgtgcgctaccaataaaaatacaaattccagttcaaaataacaatgcaaatgaaaatgt 993

                                                                        
Query: 140  ttaggccgccgtaaacgggccgagcacttcttattcgacgtacacacaactcaaacta-- 197
            ||||||||||| | ||||||| | ||||||||||| |||||  |||||||||||||||  
Sbjct: 992  ttaggccgccgcagacgggccaaacacttcttatttgacgt--acacaactcaaactaca 935

                                              
Query: 198  ---cagggaggcttttcaaatttcaagtgcagat 228
               |||||||||||||||||||||||||||||||
Sbjct: 934  atgcagggaggcttttcaaatttcaagtgcagat 901

>ref|NM_187692.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 816

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                       
Query: 284 agatttcttgctctcctgcaggcgctcgaacaggctgccatcgaaggcgcccctcacgat 343
           |||||||||||| ||||| || ||||| ||||||||||||||||||||||| || ||  |
Sbjct: 810 agatttcttgctgtcctgaagtcgctcaaacaggctgccatcgaaggcgcctctaacagt 751

                                               
Query: 344 ttctcgctgcaaaaggccttcttcatcctttgccac 379
           |||||| ||||| || ||||||| |||||| |||||
Sbjct: 750 ttctcgttgcaacagcccttctttatccttggccac 715

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                           
Query: 284     agatttcttgctctcctgcaggcgctcgaacaggctgccatcgaaggcgcccctcacgat 343
               |||||||||||| ||||| || ||||| ||||||||||||||||||||||| || ||  |
Sbjct: 6388675 agatttcttgctgtcctgaagtcgctcaaacaggctgccatcgaaggcgcctctaacagt 6388616

                                                   
Query: 344     ttctcgctgcaaaaggccttcttcatcctttgccac 379
               |||||| ||||| || ||||||| |||||| |||||
Sbjct: 6388615 ttctcgttgcaacagcccttctttatccttggccac 6388580

>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
             complete sequence
          Length = 146568

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                         
Query: 284   agatttcttgctctcctgcaggcgctcgaacaggctgccatcgaaggcgcccctcacgat 343
             |||||||||||| ||||| || ||||| ||||||||||||||||||||||| || ||  |
Sbjct: 68801 agatttcttgctgtcctgaagtcgctcaaacaggctgccatcgaaggcgcctctaacagt 68742

                                                 
Query: 344   ttctcgctgcaaaaggccttcttcatcctttgccac 379
             |||||| ||||| || ||||||| |||||| |||||
Sbjct: 68741 ttctcgttgcaacagcccttctttatccttggccac 68706

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                           
Query: 284     agatttcttgctctcctgcaggcgctcgaacaggctgccatcgaaggcgcccctcacgat 343
               |||||||||||| ||||| || ||||| ||||||||||||||||||||||| || ||  |
Sbjct: 6387888 agatttcttgctgtcctgaagtcgctcaaacaggctgccatcgaaggcgcctctaacagt 6387829

                                                   
Query: 344     ttctcgctgcaaaaggccttcttcatcctttgccac 379
               |||||| ||||| || ||||||| |||||| |||||
Sbjct: 6387828 ttctcgttgcaacagcccttctttatccttggccac 6387793

>gb|AY104352.1| Zea mays PCO064372 mRNA sequence
          Length = 912

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 342 atttctcgctgcaaaaggccttcttcatcctttgccac 379
           |||||||||||||| ||||| ||||  |||||||||||
Sbjct: 889 atttctcgctgcaacaggccatctttgtcctttgccac 852

>gb|AC068647.10| Homo sapiens 3 BAC RP11-64D22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 132745

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    aataacagtacaaattccagt 112
             |||||||||||||||||||||
Sbjct: 39392 aataacagtacaaattccagt 39372

>gb|AC125629.1| Homo sapiens 12 BAC RP11-359K6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 139793

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   aaatatgaagacagatgaaaa 136
             |||||||||||||||||||||
Sbjct: 89770 aaatatgaagacagatgaaaa 89750

>gb|AE004593.1| Pseudomonas aeruginosa PAO1, section 154 of 529 of the complete genome
          Length = 11002

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   caggcgctcgaacaggctgcc 322
             |||||||||||||||||||||
Sbjct: 10325 caggcgctcgaacaggctgcc 10305

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     cctgcaggcgctcgaacagg 317
               ||||||||||||||||||||
Sbjct: 2927541 cctgcaggcgctcgaacagg 2927522

>ref|XM_855376.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 7
           (LOC490971), mRNA
          Length = 2595

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 gttaatctcatcttctgaca 480
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_855343.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 6
           (LOC490971), mRNA
          Length = 2631

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 gttaatctcatcttctgaca 480
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_855308.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 5
           (LOC490971), mRNA
          Length = 2604

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 gttaatctcatcttctgaca 480
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_844885.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 2
           (LOC490971), mRNA
          Length = 2579

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 gttaatctcatcttctgaca 480
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_855210.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 3
           (LOC490971), mRNA
          Length = 1186

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 gttaatctcatcttctgaca 480
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_548094.2| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 1
           (LOC490971), mRNA
          Length = 2613

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 461 gttaatctcatcttctgaca 480
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_651817.1| Entamoeba histolytica HM-1:IMSS polysaccharide deacetylase,
           putative (6.t00029) partial mRNA
          Length = 828

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 423 aggaaatcatacatattacg 442
           ||||||||||||||||||||
Sbjct: 324 aggaaatcatacatattacg 343

>gb|AC138453.8| Medicago truncatula clone mth2-20m14, complete sequence
          Length = 144639

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    gacagatgaaaatgtttagg 144
              ||||||||||||||||||||
Sbjct: 104112 gacagatgaaaatgtttagg 104131

>emb|AL512844.5| Human DNA sequence from clone RP11-90H3 on chromosome 1 Contains two
             matrin 3 (MATR3) pseudogenes, complete sequence
          Length = 159017

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   ggcccagcccaggaaatcat 432
             ||||||||||||||||||||
Sbjct: 21244 ggcccagcccaggaaatcat 21225

>emb|AL136219.17| Human DNA sequence from clone RP11-149B7 on chromosome 13 Contains a
              glyceraldehyde-3-phosphate dehydrogenase (GAPD)(GAPDH)
              pseudogene, 2 novel genes, a H2B histone family, member H
              (H2BFH)(H2B.h, H2B/h, dJ221C16.8) pseudogene, the 3' end of
              the EFHA1 gene for EF hand domain family, member A1 and
              three CpG islands, complete sequence
          Length = 167830

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    gctgcaaaaggccttcttca 368
              ||||||||||||||||||||
Sbjct: 151636 gctgcaaaaggccttcttca 151655

>emb|Z99107.2|BSUB0004 Bacillus subtilis complete genome (section 4 of 21): from 611631 to
              813719
          Length = 202089

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    gttcactgccgcattcagga 283
              ||||||||||||||||||||
Sbjct: 110552 gttcactgccgcattcagga 110533

>emb|Y15254.1|BSYERABCD Bacillus subtilis 13kB DNA fragment, from yerA to sapB gene
          Length = 13000

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 264  gttcactgccgcattcagga 283
            ||||||||||||||||||||
Sbjct: 9294 gttcactgccgcattcagga 9275

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     cctgcaggcgctcgaacagg 317
               ||||||||||||||||||||
Sbjct: 1106069 cctgcaggcgctcgaacagg 1106050

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 291     ttgctctcctgcaggcgctc 310
               ||||||||||||||||||||
Sbjct: 3043211 ttgctctcctgcaggcgctc 3043230

>gb|AC008360.3|AC008360 Drosophila melanogaster, chromosome 3R, region 87E-87F, BAC clone
             BACR06H18, complete sequence
          Length = 194672

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   agacagatgaaaatgtttag 143
             ||||||||||||||||||||
Sbjct: 95653 agacagatgaaaatgtttag 95634

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    cctgcaggcgctcgaacagg 317
              ||||||||||||||||||||
Sbjct: 700710 cctgcaggcgctcgaacagg 700691

>gb|AC010789.9|AC010789 Homo sapiens chromosome 10, clone RP11-190J1, complete sequence
          Length = 203842

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    ctatgtgctaccaataacag 99
             ||||||||||||||||||||
Sbjct: 28409 ctatgtgctaccaataacag 28390

>gb|AF274572.4| Homo sapiens chromosome X clone RP4-741O10 map q28, complete sequence
          Length = 126522

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   ggcccagcccaggaaatcat 432
             ||||||||||||||||||||
Sbjct: 42234 ggcccagcccaggaaatcat 42253

>gb|AC111094.12| Mus musculus chromosome 3, clone RP23-171O7, complete sequence
          Length = 187464

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 214    atttcaagtgcagatgtttcataa 237
              ||||||||||||||||||| ||||
Sbjct: 105343 atttcaagtgcagatgtttgataa 105366

>emb|BX572629.8| Zebrafish DNA sequence from clone CH211-195L15 in linkage group 19,
              complete sequence
          Length = 170971

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    aagacagatgaaaatgttta 142
              ||||||||||||||||||||
Sbjct: 165213 aagacagatgaaaatgttta 165194

>gb|AE003700.3| Drosophila melanogaster chromosome 3R, section 38 of 118 of the
             complete sequence
          Length = 228324

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   agacagatgaaaatgtttag 143
             ||||||||||||||||||||
Sbjct: 22154 agacagatgaaaatgtttag 22135

>emb|CT009557.4| Pan troglodytes chromosome X clone PTB-010G23 map Xq28, complete sequence
          Length = 244504

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    ggcccagcccaggaaatcat 432
              ||||||||||||||||||||
Sbjct: 168335 ggcccagcccaggaaatcat 168316

>gb|AC003923.1|AC003923 Drosophila melanogaster (P1 DS04219 (D36)) DNA sequence, complete
             sequence
          Length = 82393

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   agacagatgaaaatgtttag 143
             ||||||||||||||||||||
Sbjct: 52874 agacagatgaaaatgtttag 52893

>emb|AL627425.15| Mouse DNA sequence from clone RP23-283L16 on chromosome 4, complete
              sequence
          Length = 226967

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    aaatatgaagacagatgaaa 135
              ||||||||||||||||||||
Sbjct: 211326 aaatatgaagacagatgaaa 211345


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,181,782
Number of Sequences: 3902068
Number of extensions: 4181782
Number of successful extensions: 90204
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90037
Number of HSP's gapped (non-prelim): 164
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)