Clone Information

BLAST Search Result

Clone Name	rbart38b11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	emb\|X77733.1\|TAVDAC1 T.aestivum VDAC 1 mRNA	541	e-151
2	ref\|XM_450604.1\| Oryza sativa (japonica cultivar-group), mRNA	137	3e-29
3	dbj\|AP008215.1\| Oryza sativa (japonica cultivar-group) genomic D...	137	3e-29
4	dbj\|AP005508.3\| Oryza sativa (japonica cultivar-group) genomic D...	137	3e-29
5	emb\|Y18104.1\|OSA18104 Oryza sativa mRNA for voltage-dependent an...	137	3e-29
6	dbj\|AK072129.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	137	3e-29
7	dbj\|AK061261.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	137	3e-29
8	dbj\|AK060652.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	137	3e-29
9	gb\|AF178950.1\|AF178950 Zea mays voltage-dependent anion channel ...	131	2e-27
10	gb\|AY104870.1\| Zea mays PCO081914 mRNA sequence	131	2e-27
11	gb\|BT016491.1\| Zea mays clone Contig324 mRNA sequence	121	2e-24
12	ref\|XM_475771.1\| Oryza sativa (japonica cultivar-group), predic...	113	5e-22
13	gb\|BT016888.1\| Zea mays clone Contig721 mRNA sequence	113	5e-22
14	gb\|AC097112.2\| Oryza sativa (japonica cultivar-group) chromosome...	113	5e-22
15	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	113	5e-22
16	emb\|AJ251562.1\|OSA251562 Oryza sativa mRNA for voltage-dependent...	113	5e-22
17	dbj\|AK071833.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	113	5e-22
18	gb\|AF178952.1\|AF178952 Zea mays voltage-dependent anion channel ...	105	1e-19
19	gb\|AY104198.1\| Zea mays PCO099812 mRNA sequence	105	1e-19
20	gb\|AF178951.1\|AF178951 Zea mays voltage-dependent anion channel ...	98	3e-17
21	gb\|AY316737.1\| Lotus corniculatus var. japonicus VDAC1.1 mRNA, c...	54	4e-04
22	emb\|X82149.1\|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent...	54	4e-04
23	dbj\|AP006116.1\| Lotus japonicus genomic DNA, chromosome 1, clone...	54	4e-04
24	dbj\|AP004901.1\| Lotus japonicus genomic DNA, chromosome 1, clone...	54	4e-04
25	ref\|NM_192554.1\| Oryza sativa (japonica cultivar-group), predic...	52	0.001
26	gb\|AC137994.19\| Medicago truncatula clone mth2-23f15, complete s...	52	0.001
27	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	52	0.001
28	dbj\|AP003300.4\| Oryza sativa (japonica cultivar-group) genomic D...	52	0.001
29	emb\|AJ251563.1\|OSA251563 Oryza sativa mRNA for voltage-dependent...	52	0.001
30	dbj\|AK104419.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	52	0.001
31	dbj\|AK104055.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	52	0.001
32	dbj\|AK070745.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	52	0.001
33	gb\|AY316738.1\| Lotus corniculatus var. japonicus VDAC1.2 mRNA, c...	46	0.090
34	dbj\|AP006692.1\| Lotus japonicus genomic DNA, chromosome 2, clone...	46	0.090
35	gb\|AC108726.9\| Homo sapiens 3 BAC RP11-385G14 (Roswell Park Canc...	42	1.4
36	gb\|AF411849.1\|AF411849S1 Homo sapiens USH3 region, partial sequence	42	1.4
37	gb\|DQ072165.1\| Phaseolus coccineus mitochrondrial voltage-depend...	42	1.4
38	gb\|BC070001.1\| Danio rerio POU domain gene 12, mRNA (cDNA clone ...	40	5.5
39	gb\|BC058318.1\| Danio rerio POU domain gene 12, mRNA (cDNA clone ...	40	5.5
40	gb\|BC044354.1\| Danio rerio POU domain gene 12, mRNA (cDNA clone ...	40	5.5
41	ref\|NM_131150.1\| Danio rerio POU domain gene 12 (pou12), mRNA	40	5.5
42	gb\|AC102044.7\| Mus musculus chromosome 9, clone RP23-303N8, comp...	40	5.5
43	ref\|XM_541501.2\| PREDICTED: Canis familiaris similar to Sarcopla...	40	5.5
44	emb\|CR356246.5\| Zebrafish DNA sequence from clone CH211-107O10 i...	40	5.5
45	emb\|AL158209.23\| Human DNA sequence from clone RP11-275N1 on chr...	40	5.5
46	gb\|CP000087.1\| Rickettsia bellii RML369-C, complete genome	40	5.5
47	emb\|Y07906.1\|DRZP12POU D.rerio mRNA for zp-12 POU gene, splice v...	40	5.5
48	gb\|BC065961.1\| Danio rerio POU domain gene 12, mRNA (cDNA clone ...	40	5.5
49	emb\|CR932798.1\| Mus musculus chromosome 2, clone RPCI-21-15D06 s...	40	5.5
50	gb\|CP000133.1\| Rhizobium etli CFN 42, complete genome	40	5.5
51	emb\|BX842683.9\| Zebrafish DNA sequence from clone DKEYP-118H3 in...	40	5.5
52	gb\|U43898.2\|DRU43898 Danio rerio alternatively spliced brn-1.1 p...	40	5.5
53	gb\|AF039952.1\|AF039952 Danio rerio type III POU domain protein (...	40	5.5
54	gb\|U77736.1\|DRU77736 Danio rerio class III POU domain protein (t...	40	5.5
55	gb\|U79765.1\|MCU79765 Mesembryanthemum crystallinum voltage-depen...	40	5.5
56	emb\|AL844538.9\| Mouse DNA sequence from clone RP23-289K19 on chr...	40	5.5

>emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA
          Length = 1159

 Score =  541 bits (273), Expect = e-151
 Identities = 385/418 (92%), Gaps = 7/418 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaatcaagttcaggattttcagagcttgaattattactgcaaagtgtggctcaacggaca 60
            ||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 1117 gaatcaagttcagaattttcagagcttgaattattactgcga-gtgtggctcaacggaca 1059

                                                                        
Query: 61   ggcactacaccgaccaaagacaaaattcctcaggaatgaaacacggcagttcttcaaatc 120
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 ggcactacaccgagcaaagacaaaattcctcaggaatgaaacacggcagttcttcaaatc 999

                                                                        
Query: 121  taacagactgcgacaacgcgcccaaggcgtgtgaagtatttgtcaaatcgccacgattcc 180
            ||||||||||| |||||| ||||||||  ||||||||||| |||||  |||| ||||| |
Sbjct: 998  taacagactgcaacaacgggcccaagggctgtgaagtatt-gtcaacccgccccgatttc 940

                                                                        
Query: 181  atccgaaaccgaggaacacccctga----gagttcagaaaagagagggcttgatttcgcc 236
            |||||||||||||||||||||||||    ||| | ||| ||| | |||||||||| ||| 
Sbjct: 939  atccgaaaccgaggaacacccctgactgagagcttagagaaggg-gggcttgattccgca 881

                                                                        
Query: 237  atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 296
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 880  atcaaggcttgagagcaatagcaatgccgaccttcgagctcttctcgatggccttggtgt 821

                                                                        
Query: 297  ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 356
            |||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||
Sbjct: 820  ccacctccgccgagatggtgcacagcgactttggcatgaactcgtgctggatcagcgcgc 761

                                                                      
Query: 357  ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtctagggtatg 414
            | |||||||||||||||||||| || |||||||| |||||||||||||| ||||||||
Sbjct: 760  tggccttgccagagttgttgatccgggccttcacaagggtgagcgggtccagggtatg 703

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>ref|XM_450604.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1124

 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Minus

                                                                       
Query: 237 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 296
           ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 915 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 856

                                                                       
Query: 297 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 356
           | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 855 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 796

                                                            
Query: 357 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtc 405
           | |||||||| || ||||||| ||| |||||||||| ||| ||||||||
Sbjct: 795 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 747

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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Minus

                                                                            
Query: 237      atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 296
                ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 11754957 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 11754898

                                                                            
Query: 297      ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 356
                | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 11754897 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 11754838

                                                                 
Query: 357      ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtc 405
                | |||||||| || ||||||| ||| |||||||||| ||| ||||||||
Sbjct: 11754837 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 11754789

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>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711F01
          Length = 193091

 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Minus

                                                                          
Query: 237    atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 296
              ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 189591 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 189532

                                                                          
Query: 297    ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 356
              | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 189531 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 189472

                                                               
Query: 357    ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtc 405
              | |||||||| || ||||||| ||| |||||||||| ||| ||||||||
Sbjct: 189471 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 189423

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>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel
          Length = 1093

 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Minus

                                                                       
Query: 237 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 296
           ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 852 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 793

                                                                       
Query: 297 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 356
           | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 792 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 733

                                                            
Query: 357 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtc 405
           | |||||||| || ||||||| ||| |||||||||| ||| ||||||||
Sbjct: 732 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 684

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>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full
            insert sequence
          Length = 3071

 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Minus

                                                                        
Query: 237  atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 296
            ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 2862 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 2803

                                                                        
Query: 297  ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 356
            | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 2802 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 2743

                                                             
Query: 357  ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtc 405
            | |||||||| || ||||||| ||| |||||||||| ||| ||||||||
Sbjct: 2742 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 2694

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>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full
           insert sequence
          Length = 1125

 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Minus

                                                                       
Query: 237 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 296
           ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 915 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 856

                                                                       
Query: 297 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 356
           | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 855 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 796

                                                            
Query: 357 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtc 405
           | |||||||| || ||||||| ||| |||||||||| ||| ||||||||
Sbjct: 795 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 747

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>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full
           insert sequence
          Length = 1242

 Score =  137 bits (69), Expect = 3e-29
 Identities = 144/169 (85%)
 Strand = Plus / Minus

                                                                       
Query: 237 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 296
           ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 929 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 870

                                                                       
Query: 297 ccacctccgccgagatggtgcagagcgacttcggcctgaactcgtgctggatcagcgcgc 356
           | || || || |||||||| || |  ||||| |||||  |||||||||||| ||||||||
Sbjct: 869 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 810

                                                            
Query: 357 ttgccttgccagagttgttgatgcgagccttcacgagggtgagcgggtc 405
           | |||||||| || ||||||| ||| |||||||||| ||| ||||||||
Sbjct: 809 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 761

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>gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel protein 1a (vdac1a) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1179

 Score =  131 bits (66), Expect = 2e-27
 Identities = 132/154 (85%)
 Strand = Plus / Minus

                                                                       
Query: 257 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 316
           ||||| || |||||||||||||||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 904 gcaatcccaaccttcgagctcttctcgatggtctttgtgtcgacctcggccgagatggtg 845

                                                                       
Query: 317 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 376
              |||||||| |||||  |||||||||||||||| || || ||||||||||||||||| 
Sbjct: 844 accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 785

                                             
Query: 377 atgcgagccttcacgagggtgagcgggtctaggg 410
           ||||| ||||||| || ||| || ||||| ||||
Sbjct: 784 atgcgggccttcaagacggttagtgggtccaggg 751

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>gb|AY104870.1| Zea mays PCO081914 mRNA sequence
          Length = 1445

 Score =  131 bits (66), Expect = 2e-27
 Identities = 132/154 (85%)
 Strand = Plus / Minus

                                                                        
Query: 257  gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 316
            ||||| || |||||||||||||||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 1015 gcaatcccaaccttcgagctcttctcgatggtctttgtgtcgacctcggccgagatggtg 956

                                                                        
Query: 317  cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 376
               |||||||| |||||  |||||||||||||||| || || ||||||||||||||||| 
Sbjct: 955  accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 896

                                              
Query: 377  atgcgagccttcacgagggtgagcgggtctaggg 410
            ||||| ||||||| || ||| || ||||| ||||
Sbjct: 895  atgcgggccttcaagacggttagtgggtccaggg 862

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>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence
          Length = 1330

 Score =  121 bits (61), Expect = 2e-24
 Identities = 115/133 (86%)
 Strand = Plus / Minus

                                                                       
Query: 257 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 316
           ||||| |||||||||||||||||||| |||| ||| || || ||||| ||||||||||||
Sbjct: 964 gcaattccgaccttcgagctcttctcaatggtctttgtatcgacctcagccgagatggtg 905

                                                                       
Query: 317 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 376
              |||||||| |||||  |||| ||||||||||| ||||| || |||||||||||||||
Sbjct: 904 accagcgactttggcctccactcatgctggatcagggcgctggctttgccagagttgttg 845

                        
Query: 377 atgcgagccttca 389
           ||||| |||||||
Sbjct: 844 atgcgtgccttca 832

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>ref|XM_475771.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 843

 Score =  113 bits (57), Expect = 5e-22
 Identities = 108/125 (86%)
 Strand = Plus / Minus

                                                                       
Query: 266 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 325
           ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  |||||||
Sbjct: 815 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 756

                                                                       
Query: 326 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 385
           || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| |||
Sbjct: 755 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 696

                
Query: 386 ttcac 390
           |||||
Sbjct: 695 ttcac 691

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>gb|BT016888.1| Zea mays clone Contig721 mRNA sequence
          Length = 1209

 Score =  113 bits (57), Expect = 5e-22
 Identities = 114/133 (85%)
 Strand = Plus / Plus

                                                                       
Query: 257 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 316
           ||||| || |||||||||||||||||||||| ||| | ||| ||||| |||||||||| |
Sbjct: 289 gcaatcccaaccttcgagctcttctcgatgggctttgggtcgacctcggccgagatgggg 348

                                                                       
Query: 317 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 376
              |||||||| |||||  |||||||||||||||| || || ||||||||||||||||| 
Sbjct: 349 accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 408

                        
Query: 377 atgcgagccttca 389
           ||||| |||||||
Sbjct: 409 atgcgggccttca 421

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>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
             complete sequence
          Length = 147704

 Score =  113 bits (57), Expect = 5e-22
 Identities = 108/125 (86%)
 Strand = Plus / Minus

                                                                         
Query: 266   accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 325
             ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  |||||||
Sbjct: 69046 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 68987

                                                                         
Query: 326   ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 385
             || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| |||
Sbjct: 68986 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 68927

                  
Query: 386   ttcac 390
             |||||
Sbjct: 68926 ttcac 68922

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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  113 bits (57), Expect = 5e-22
 Identities = 108/125 (86%)
 Strand = Plus / Minus

                                                                            
Query: 266      accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 325
                ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  |||||||
Sbjct: 26424355 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 26424296

                                                                            
Query: 326      ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 385
                || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| |||
Sbjct: 26424295 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 26424236

                     
Query: 386      ttcac 390
                |||||
Sbjct: 26424235 ttcac 26424231

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>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene)
          Length = 1189

 Score =  113 bits (57), Expect = 5e-22
 Identities = 108/125 (86%)
 Strand = Plus / Minus

                                                                       
Query: 266 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 325
           ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  |||||||
Sbjct: 854 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 795

                                                                       
Query: 326 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 385
           || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| |||
Sbjct: 794 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 735

                
Query: 386 ttcac 390
           |||||
Sbjct: 734 ttcac 730

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>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full
           insert sequence
          Length = 1231

 Score =  113 bits (57), Expect = 5e-22
 Identities = 108/125 (86%)
 Strand = Plus / Minus

                                                                       
Query: 266 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 325
           ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  |||||||
Sbjct: 898 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 839

                                                                       
Query: 326 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 385
           || |||||||||||||||||||| ||||| || ||| ||||| ||||||||| ||| |||
Sbjct: 838 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 779

                
Query: 386 ttcac 390
           |||||
Sbjct: 778 ttcac 774

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>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1129

 Score =  105 bits (53), Expect = 1e-19
 Identities = 107/125 (85%)
 Strand = Plus / Minus

                                                                       
Query: 266 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 325
           ||||| ||||||||||||||||||||||||||||||||||  |||||||||   || |||
Sbjct: 889 accttagagctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgac 830

                                                                       
Query: 326 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 385
           || |||||  ||||||| |||||||| || |||||| ||||  ||||||||| ||| |||
Sbjct: 829 ttgggcctccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgcc 770

                
Query: 386 ttcac 390
           |||||
Sbjct: 769 ttcac 765

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>gb|AY104198.1| Zea mays PCO099812 mRNA sequence
          Length = 1156

 Score =  105 bits (53), Expect = 1e-19
 Identities = 107/125 (85%)
 Strand = Plus / Minus

                                                                       
Query: 266 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgac 325
           ||||| ||||||||||||||||||||||||||||||||||  |||||||||   || |||
Sbjct: 923 accttagagctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgac 864

                                                                       
Query: 326 ttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagcc 385
           || |||||  ||||||| |||||||| || |||||| ||||  ||||||||| ||| |||
Sbjct: 863 ttgggcctccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgcc 804

                
Query: 386 ttcac 390
           |||||
Sbjct: 803 ttcac 799

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>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1175

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                       
Query: 257 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 316
           ||||| || ||||||||||||||||| |||| ||| || || ||||| ||||||||||||
Sbjct: 959 gcaattccaaccttcgagctcttctcaatggtctttgtatcgacctcagccgagatggtg 900

                                                                       
Query: 317 cagagcgacttcggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttg 376
              |||||||| |||||  |||| |||||||||||  |||| || ||||| |||||||||
Sbjct: 899 accagcgactttggcctccactcatgctggatcaggacgctggctttgcccgagttgttg 840

                        
Query: 377 atgcgagccttca 389
           ||||| |||||||
Sbjct: 839 atgcgtgccttca 827

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>gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, complete cds
          Length = 1203

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                       
Query: 275 ctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctg 334
           ||||| || |||||||||||||| |||||| | ||||||||  |||  ||||| || |  
Sbjct: 873 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 814

                                                      
Query: 335 aactcgtgctggatcagcgcgcttgccttgccagagttgttga 377
            ||||||||||||| || || |||||||||||  |||||||||
Sbjct: 813 cactcgtgctggatgagagcacttgccttgccgaagttgttga 771

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>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel
          Length = 1174

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                       
Query: 274 gctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcct 333
           ||||||||| |||||||||||||| ||||| |  |||| ||||  ||| ||||| |||||
Sbjct: 786 gctcttctcaatggccttggtgtcaacctcggtggagaaggtgatgagagacttgggcct 727

                                      
Query: 334 gaactcgtgctggatcagcgcgcttgc 360
             || |||||||||| ||||| |||||
Sbjct: 726 ccacgcgtgctggatgagcgcacttgc 700

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>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199,
              complete sequence
          Length = 123325

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 84/103 (81%)
 Strand = Plus / Plus

                                                                          
Query: 275    ctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctg 334
              ||||| || |||||||||||||| |||||| | ||||||||  |||  ||||| || |  
Sbjct: 119488 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 119547

                                                         
Query: 335    aactcgtgctggatcagcgcgcttgccttgccagagttgttga 377
               ||||||||||||| || || |||||||||||  |||||||||
Sbjct: 119548 cactcgtgctggatgagagcacttgccttgccgaagttgttga 119590

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>dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13M13, TM0051b,
            complete sequence
          Length = 54022

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 84/103 (81%)
 Strand = Plus / Minus

                                                                        
Query: 275  ctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttcggcctg 334
            ||||| || |||||||||||||| |||||| | ||||||||  |||  ||||| || |  
Sbjct: 8730 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 8671

                                                       
Query: 335  aactcgtgctggatcagcgcgcttgccttgccagagttgttga 377
             ||||||||||||| || || |||||||||||  |||||||||
Sbjct: 8670 cactcgtgctggatgagagcacttgccttgccgaagttgttga 8628

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>ref|NM_192554.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 828

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 269 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 328
           |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 797 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 738

                                                                       
Query: 329 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 388
           || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 737 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 678

             
Query: 389 ac 390
           ||
Sbjct: 677 ac 676

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>gb|AC137994.19| Medicago truncatula clone mth2-23f15, complete sequence
          Length = 131563

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                   
Query: 336   actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttca 389
             ||||||||||||| || || ||||||||| | |||||| |||||||| ||||||
Sbjct: 72077 actcgtgctggataagggcacttgccttggctgagttggtgatgcgacccttca 72130

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 98/122 (80%)
 Strand = Plus / Plus

                                                                            
Query: 269      ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 328
                |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 22904687 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 22904746

                                                                            
Query: 329      ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 388
                || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 22904747 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 22904806

                  
Query: 389      ac 390
                ||
Sbjct: 22904807 ac 22904808

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>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0700A11
          Length = 136321

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 98/122 (80%)
 Strand = Plus / Plus

                                                                          
Query: 269    ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 328
              |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 108244 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 108303

                                                                          
Query: 329    ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 388
              || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 108304 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 108363

                
Query: 389    ac 390
              ||
Sbjct: 108364 ac 108365

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>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene)
          Length = 1148

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 269 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 328
           |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 870 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 811

                                                                       
Query: 329 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 388
           || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 810 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 751

             
Query: 389 ac 390
           ||
Sbjct: 750 ac 749

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>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full
           insert sequence
          Length = 1151

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 269 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 328
           |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 875 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 816

                                                                       
Query: 329 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 388
           || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 815 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 756

             
Query: 389 ac 390
           ||
Sbjct: 755 ac 754

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>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full
           insert sequence
          Length = 1160

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 269 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 328
           |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 886 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 827

                                                                       
Query: 329 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 388
           || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 826 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 767

             
Query: 389 ac 390
           ||
Sbjct: 766 ac 765

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>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full
           insert sequence
          Length = 1216

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 98/122 (80%)
 Strand = Plus / Minus

                                                                       
Query: 269 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagagcgacttc 328
           |||| ||||||||| || ||||||||||| |||||  | |||||||||   ||||| || 
Sbjct: 930 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtgattagcgatttg 871

                                                                       
Query: 329 ggcctgaactcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttc 388
           || |   | || |||||||  |||||||| ||| ||||| ||||||||| ||||||||||
Sbjct: 870 ggacgccattcatgctggacgagcgcgctggccatgccatagttgttgaagcgagccttc 811

             
Query: 389 ac 390
           ||
Sbjct: 810 ac 809

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>gb|AY316738.1| Lotus corniculatus var. japonicus VDAC1.2 mRNA, complete cds
          Length = 1103

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 336 actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcac 390
           |||| |||||||| || ||  |||||||||||  |||||||| ||||||||||||
Sbjct: 760 actcatgctggataagagcatttgccttgccaaggttgttgacgcgagccttcac 706

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>dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT06K23, TM0391,
             complete sequence
          Length = 98505

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                    
Query: 336   actcgtgctggatcagcgcgcttgccttgccagagttgttgatgcgagccttcac 390
             |||| |||||||| || ||  |||||||||||  |||||||| ||||||||||||
Sbjct: 30950 actcatgctggataagagcatttgccttgccaaggttgttgacgcgagccttcac 30896

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>gb|AC108726.9| Homo sapiens 3 BAC RP11-385G14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 36019

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 206   gagttcagaaaagagagggct 226
             |||||||||||||||||||||
Sbjct: 24224 gagttcagaaaagagagggct 24244

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>gb|AF411849.1|AF411849S1 Homo sapiens USH3 region, partial sequence
          Length = 198334

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 206   gagttcagaaaagagagggct 226
             |||||||||||||||||||||
Sbjct: 92910 gagttcagaaaagagagggct 92930

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>gb|DQ072165.1| Phaseolus coccineus mitochrondrial voltage-dependent
           anion-selective channel mRNA, complete cds; nuclear gene
           for mitochondrial product
          Length = 831

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 275 ctcttctcgatggccttggtgtccacctc 303
           |||||||| |||||||||||||| |||||
Sbjct: 794 ctcttctcaatggccttggtgtctacctc 766

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>gb|BC070001.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:85606
           IMAGE:6963958), complete cds
          Length = 2881

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 agatggtgcagagcgacttc 328
           ||||||||||||||||||||
Sbjct: 755 agatggtgcagagcgacttc 774

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>gb|BC058318.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:65765
           IMAGE:6801552), complete cds
          Length = 2899

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 agatggtgcagagcgacttc 328
           ||||||||||||||||||||
Sbjct: 724 agatggtgcagagcgacttc 743

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>gb|BC044354.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:55267
           IMAGE:3818319), complete cds
          Length = 2285

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 agatggtgcagagcgacttc 328
           ||||||||||||||||||||
Sbjct: 789 agatggtgcagagcgacttc 808

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>ref|NM_131150.1| Danio rerio POU domain gene 12 (pou12), mRNA
          Length = 2189

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 agatggtgcagagcgacttc 328
           ||||||||||||||||||||
Sbjct: 709 agatggtgcagagcgacttc 728

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>gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, complete sequence
          Length = 210347

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 91    caggaatgaaacacggcagttctt 114
             ||||||||||||| ||||||||||
Sbjct: 85919 caggaatgaaacaaggcagttctt 85942

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>ref|XM_541501.2| PREDICTED: Canis familiaris similar to Sarcoplasmic reticulum
            histidine-rich calcium-binding protein precursor
            (LOC484386), mRNA
          Length = 2344

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 276  tcttctcgatggccttggtgtcca 299
            ||||||| ||||||||||||||||
Sbjct: 1083 tcttctccatggccttggtgtcca 1060

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>emb|CR356246.5| Zebrafish DNA sequence from clone CH211-107O10 in linkage group 7,
             complete sequence
          Length = 101758

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    ggattttcagagcttgaattatta 36
             |||||| |||||||||||||||||
Sbjct: 21331 ggatttgcagagcttgaattatta 21308

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>emb|AL158209.23| Human DNA sequence from clone RP11-275N1 on chromosome 10 Contains a
             novel gene and a pseudogene similar to part of FLJ10581,
             complete sequence
          Length = 132327

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   tgagagttcagaaaagagag 222
             ||||||||||||||||||||
Sbjct: 29185 tgagagttcagaaaagagag 29166

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>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     gattttcagagcttgaatta 33
              ||||||||||||||||||||
Sbjct: 928739 gattttcagagcttgaatta 928758

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>emb|Y07906.1|DRZP12POU D.rerio mRNA for zp-12 POU gene, splice variant (postsomitogenesis,
           20-28 hpf)
          Length = 2994

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 agatggtgcagagcgacttc 328
           ||||||||||||||||||||
Sbjct: 751 agatggtgcagagcgacttc 770

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>gb|BC065961.1| Danio rerio POU domain gene 12, mRNA (cDNA clone MGC:76858
           IMAGE:6969114), complete cds
          Length = 2762

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 agatggtgcagagcgacttc 328
           ||||||||||||||||||||
Sbjct: 749 agatggtgcagagcgacttc 768

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>emb|CR932798.1| Mus musculus chromosome 2, clone RPCI-21-15D06 strain 129/Sv, complete
             sequence
          Length = 165525

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 99    aaacacggcagttcttcaaatcta 122
             ||||||||||| ||||||||||||
Sbjct: 66822 aaacacggcagctcttcaaatcta 66799

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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    gcttgatttcgccatcaagg 243
              ||||||||||||||||||||
Sbjct: 676426 gcttgatttcgccatcaagg 676445

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>emb|BX842683.9| Zebrafish DNA sequence from clone DKEYP-118H3 in linkage group 9,
             complete sequence
          Length = 160823

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   agatggtgcagagcgacttc 328
             ||||||||||||||||||||
Sbjct: 89510 agatggtgcagagcgacttc 89529

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>gb|U43898.2|DRU43898 Danio rerio alternatively spliced brn-1.1 protein variant (brn-1.1)
           mRNA, partial cds
          Length = 1326

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 agatggtgcagagcgacttc 328
           ||||||||||||||||||||
Sbjct: 143 agatggtgcagagcgacttc 162

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>gb|AF039952.1|AF039952 Danio rerio type III POU domain protein (zp-12) mRNA, complete cds
          Length = 2189

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 agatggtgcagagcgacttc 328
           ||||||||||||||||||||
Sbjct: 709 agatggtgcagagcgacttc 728

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>gb|U77736.1|DRU77736 Danio rerio class III POU domain protein (taichi) gene, complete
           cds
          Length = 1979

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 agatggtgcagagcgacttc 328
           ||||||||||||||||||||
Sbjct: 251 agatggtgcagagcgacttc 270

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>gb|U79765.1|MCU79765 Mesembryanthemum crystallinum voltage-dependent anion-selective
           channel protein porin (VDAC) mRNA, complete cds
          Length = 1210

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 277 cttctcgatggccttggtgtccacctccgccgagatggtg 316
           |||||| |||||||||||||| ||||| || |||| ||||
Sbjct: 860 cttctcaatggccttggtgtcaacctcagcagagaaggtg 821

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>emb|AL844538.9| Mouse DNA sequence from clone RP23-289K19 on chromosome 2, complete
              sequence
          Length = 180252

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 99     aaacacggcagttcttcaaatcta 122
              ||||||||||| ||||||||||||
Sbjct: 137881 aaacacggcagctcttcaaatcta 137904


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,994,480
Number of Sequences: 3902068
Number of extensions: 2994480
Number of successful extensions: 49769
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49614
Number of HSP's gapped (non-prelim): 153
length of query: 414
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 392
effective length of database: 17,147,199,772
effective search space: 6721702310624
effective search space used: 6721702310624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result