ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart38b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 56 7e-05
3emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa... 56 7e-05
4emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa... 56 7e-05
5gb|BC083135.1| Mus musculus prothymosin alpha, mRNA (cDNA clone ... 44 0.25
6gb|BC081453.1| Mus musculus prothymosin alpha, mRNA (cDNA clone ... 44 0.25
7gb|AC102575.11| Mus musculus chromosome 14, clone RP23-239P22, c... 44 0.25
8gb|AC113287.8| Mus musculus chromosome 3, clone RP23-412L13, com... 44 0.25
9dbj|AK142076.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 44 0.25
10dbj|AK152032.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 44 0.25
11dbj|AK153953.1| Mus musculus 2 days neonate thymus thymic cells ... 44 0.25
12dbj|AK151768.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 44 0.25
13dbj|AK146849.1| Mus musculus 17 days embryo kidney cDNA, RIKEN f... 44 0.25
14dbj|AK143576.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f... 44 0.25
15dbj|AK151511.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 44 0.25
16dbj|AK159128.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 44 0.25
17dbj|AK146651.1| Mus musculus 16 days embryo kidney cDNA, RIKEN f... 44 0.25
18dbj|AK146454.1| Mus musculus 17 days embryo kidney cDNA, RIKEN f... 44 0.25
19dbj|AK145650.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 44 0.25
20dbj|AK153496.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 44 0.25
21dbj|AK151289.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 44 0.25
22dbj|AK153178.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 44 0.25
23dbj|AK132003.1| Mus musculus 11 days embryo whole body cDNA, RIK... 44 0.25
24dbj|AK088005.1| Mus musculus 2 days neonate thymus thymic cells ... 44 0.25
25dbj|AK084218.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 44 0.25
26dbj|AK037980.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 44 0.25
27ref|NM_008972.1| Mus musculus prothymosin alpha (Ptma), mRNA 44 0.25
28emb|X56135.1|MMTHYMOA Mouse mRNA for prothymosin alpha 44 0.25
29ref|XM_974043.1| PREDICTED: Mus musculus nemo like kinase, trans... 42 0.99
30emb|Z95326.1|HS344F17 Human DNA sequence from clone RP3-344F17 o... 42 0.99
31emb|AL591376.11| Mouse DNA sequence from clone RP23-404C20 on ch... 42 0.99
32gb|BC058652.1| Mus musculus nemo like kinase, mRNA (cDNA clone M... 42 0.99
33gb|BC057667.1| Mus musculus nemo like kinase, mRNA (cDNA clone M... 42 0.99
34ref|NM_008702.2| Mus musculus nemo like kinase (Nlk), mRNA 42 0.99
35dbj|AK024262.1| Homo sapiens cDNA FLJ14200 fis, clone NT2RP3002799 42 0.99
36dbj|AK078118.1| Mus musculus adult male medulla oblongata cDNA, ... 42 0.99
37gb|AC048341.22| Homo sapiens 12 BAC RP11-631N16 (Roswell Park Ca... 42 0.99
38dbj|AK041337.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 0.99
39gb|AC155320.2| Pan troglodytes BAC clone CH251-421K1 from chromo... 42 0.99
40gb|AC009161.14| Homo sapiens chromosome 16 clone RP11-75D3, comp... 42 0.99
41ref|XM_344122.2| PREDICTED: Rattus norvegicus similar to nemo li... 42 0.99
42ref|XM_573152.1| PREDICTED: Rattus norvegicus similar to nemo li... 42 0.99
43gb|AF036332.1|AF036332 Mus musculus nemo-like kinase (Nlk) mRNA,... 42 0.99
44emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chro... 42 0.99
45gb|AC167963.5| Mus musculus chromosome 1, clone RP24-171A4, comp... 40 3.9
46gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 3.9
47gb|AF519727.1| Betta smaragdina isolate B193 recombinase activat... 40 3.9
48ref|XM_755516.1| Ustilago maydis 521 hypothetical protein (UM044... 40 3.9
49gb|AC133182.3| Mus musculus BAC clone RP24-181H19 from chromosom... 40 3.9
50gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cance... 40 3.9
51emb|AL121877.14|HSBB140E4 Human DNA sequence from clone RP13-140... 40 3.9
52emb|AL133456.1| Human DNA sequence from clone RP1-231P7P on chro... 40 3.9
53ref|XM_793784.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 3.9
54gb|AC184714.1| Macaca mulatta clone CH250-396P23 map human ortho... 40 3.9
55gb|AC184713.1| Macaca mulatta clone CH250-569D9 map human orthol... 40 3.9
56gb|AC184712.1| Macaca mulatta clone CH250-14G4 map human ortholo... 40 3.9
57gb|AC184711.1| Macaca mulatta clone CH250-63N16 map human orthol... 40 3.9
58emb|X58518.1|GGCADHB Chicken mRNA for B-cadherin 40 3.9
59emb|BX248411.3| Mouse DNA sequence from clone RP23-130D7 on chro... 40 3.9
60gb|AC069381.8| Homo sapiens chromosome 15, clone RP11-604N3, com... 40 3.9
61gb|AC094104.2| Homo sapiens chromosome 5 clone RP11-438C19, comp... 40 3.9
62emb|CR387414.1| Gallus gallus finished cDNA, clone ChEST21c1 40 3.9
63gb|M81894.1|CHKKCAM Chicken B-cadherin (K-CAM) gene, complete cd... 40 3.9
64dbj|AK048890.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 3.9
65gb|AC154122.7| Mus musculus chromosome 15, clone RP24-62G16, com... 40 3.9
66gb|AC024038.6|AC024038 Homo sapiens BAC clone RP11-349O6 from Y,... 40 3.9
67gb|DQ020488.1| Sus scrofa clone BAC KNP_798F4, complete sequence 40 3.9
68gb|AC008417.3|AC008417 Homo sapiens chromosome 5 clone CTC-287O8... 40 3.9
69gb|AC155838.7| Mus musculus 6 BAC RP24-441P8 (Roswell Park Cance... 40 3.9
70emb|BX296566.5| Zebrafish DNA sequence from clone CH211-196F4 in... 40 3.9
71gb|AC111031.8| Mus musculus chromosome 18, clone RP23-447L21, co... 40 3.9
72emb|AL096757.1|HSJ231P7P Human DNA sequence from clone 231P7p on... 40 3.9
73gb|AC167139.9| Mus musculus chromosome 1, clone RP23-397C14, com... 40 3.9 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 247      cctcctcctcaccgtcaccttgagcccgccgtccat 282
                |||||||||||||||||||||||| |||||| ||||
Sbjct: 14910522 cctcctcctcaccgtcaccttgaggccgccggccat 14910557
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 247      cctcctcctcaccgtcaccttgagcccgccgtccat 282
                |||||||||||||||||||||||| |||||| ||||
Sbjct: 14864805 cctcctcctcaccgtcaccttgaggccgccggccat 14864840
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>emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa0041M09 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 146519

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 247  cctcctcctcaccgtcaccttgagcccgccgtccat 282
            |||||||||||||||||||||||| |||||| ||||
Sbjct: 9364 cctcctcctcaccgtcaccttgaggccgccggccat 9329
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>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 174521

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                  
Query: 247    cctcctcctcaccgtcaccttgagcccgccgtccat 282
              |||||||||||||||||||||||| |||||| ||||
Sbjct: 171325 cctcctcctcaccgtcaccttgaggccgccggccat 171290
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>gb|BC083135.1| Mus musculus prothymosin alpha, mRNA (cDNA clone MGC:103390
           IMAGE:6506450), complete cds
          Length = 1196

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 360 tcctcctcctcaccgtcacctt 339
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>gb|BC081453.1| Mus musculus prothymosin alpha, mRNA (cDNA clone MGC:102090
           IMAGE:6820943), complete cds
          Length = 934

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 397 tcctcctcctcaccgtcacctt 376
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>gb|AC102575.11| Mus musculus chromosome 14, clone RP23-239P22, complete sequence
          Length = 238123

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 246   tcctcctcctcaccgtcacctt 267
             ||||||||||||||||||||||
Sbjct: 58832 tcctcctcctcaccgtcacctt 58811
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>gb|AC113287.8| Mus musculus chromosome 3, clone RP23-412L13, complete sequence
          Length = 214444

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 246    tcctcctcctcaccgtcacctt 267
              ||||||||||||||||||||||
Sbjct: 159848 tcctcctcctcaccgtcacctt 159869
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>dbj|AK142076.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230021M02 product:prothymosin
           alpha, full insert sequence
          Length = 964

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 413 tcctcctcctcaccgtcacctt 392
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>dbj|AK152032.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830045K19 product:prothymosin
           alpha, full insert sequence
          Length = 1199

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 407 tcctcctcctcaccgtcacctt 386
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>dbj|AK153953.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430010L22
           product:prothymosin alpha, full insert sequence
          Length = 930

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 412 tcctcctcctcaccgtcacctt 391
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>dbj|AK151768.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830036P17 product:prothymosin
           alpha, full insert sequence
          Length = 1201

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 408 tcctcctcctcaccgtcacctt 387
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>dbj|AK146849.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched
           library, clone:I920064G23 product:prothymosin alpha,
           full insert sequence
          Length = 1200

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 408 tcctcctcctcaccgtcacctt 387
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>dbj|AK143576.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
           library, clone:F420006I06 product:prothymosin alpha,
           full insert sequence
          Length = 1200

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 408 tcctcctcctcaccgtcacctt 387
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>dbj|AK151511.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830031D01 product:prothymosin
           alpha, full insert sequence
          Length = 1203

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 411 tcctcctcctcaccgtcacctt 390
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>dbj|AK159128.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420002N16 product:prothymosin alpha,
           full insert sequence
          Length = 1200

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 408 tcctcctcctcaccgtcacctt 387
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>dbj|AK146651.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched
           library, clone:I920038I17 product:prothymosin alpha,
           full insert sequence
          Length = 1200

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 408 tcctcctcctcaccgtcacctt 387
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>dbj|AK146454.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched
           library, clone:I920005J04 product:prothymosin alpha,
           full insert sequence
          Length = 1197

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 408 tcctcctcctcaccgtcacctt 387
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>dbj|AK145650.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0026A17 product:prothymosin alpha,
           full insert sequence
          Length = 931

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 408 tcctcctcctcaccgtcacctt 387
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>dbj|AK153496.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830167H20 product:prothymosin
           alpha, full insert sequence
          Length = 1200

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 408 tcctcctcctcaccgtcacctt 387
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>dbj|AK151289.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830027L09 product:prothymosin
           alpha, full insert sequence
          Length = 1199

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 407 tcctcctcctcaccgtcacctt 386
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>dbj|AK153178.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830126K24 product:prothymosin
           alpha, full insert sequence
          Length = 1201

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 408 tcctcctcctcaccgtcacctt 387
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>dbj|AK132003.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2700078I15 product:prothymosin
           alpha, full insert sequence
          Length = 955

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 414 tcctcctcctcaccgtcacctt 393
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>dbj|AK088005.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430002B21
           product:prothymosin alpha, full insert sequence
          Length = 1199

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 408 tcctcctcctcaccgtcacctt 387
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>dbj|AK084218.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230009N16 product:prothymosin
           alpha, full insert sequence
          Length = 930

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 407 tcctcctcctcaccgtcacctt 386
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>dbj|AK037980.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130068L07 product:prothymosin
           alpha, full insert sequence
          Length = 1068

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 408 tcctcctcctcaccgtcacctt 387
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>ref|NM_008972.1| Mus musculus prothymosin alpha (Ptma), mRNA
          Length = 1191

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 397 tcctcctcctcaccgtcacctt 376
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>emb|X56135.1|MMTHYMOA Mouse mRNA for prothymosin alpha
          Length = 1191

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 tcctcctcctcaccgtcacctt 267
           ||||||||||||||||||||||
Sbjct: 397 tcctcctcctcaccgtcacctt 376
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>ref|XM_974043.1| PREDICTED: Mus musculus nemo like kinase, transcript variant 4
           (Nlk), mRNA
          Length = 1872

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 241 caccttcctcctcctcaccgtcacc 265
           ||||||||||||||||||| |||||
Sbjct: 334 caccttcctcctcctcaccttcacc 358
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>emb|Z95326.1|HS344F17 Human DNA sequence from clone RP3-344F17 on chromosome 6q22.1-22.33
             Contains part of the gene for a novel protein similar to
             FLJ13018 and other hypothetical proteins, complete
             sequence
          Length = 85832

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 122   aatattatttgcttttttaca 142
             |||||||||||||||||||||
Sbjct: 40536 aatattatttgcttttttaca 40516
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>emb|AL591376.11| Mouse DNA sequence from clone RP23-404C20 on chromosome 11 Contains the
             5' end of the Nlk gene for nemo like kinase, a laminin
             receptor 1 (ribosomal protein SA) (Lamr1) pseudogene and a
             novel gene, complete sequence
          Length = 141489

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 241   caccttcctcctcctcaccgtcacc 265
             ||||||||||||||||||| |||||
Sbjct: 44287 caccttcctcctcctcaccttcacc 44263
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>gb|BC058652.1| Mus musculus nemo like kinase, mRNA (cDNA clone MGC:76386
            IMAGE:6406851), complete cds
          Length = 4461

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 241  caccttcctcctcctcaccgtcacc 265
            ||||||||||||||||||| |||||
Sbjct: 1216 caccttcctcctcctcaccttcacc 1240
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>gb|BC057667.1| Mus musculus nemo like kinase, mRNA (cDNA clone MGC:68238
           IMAGE:4235238), complete cds
          Length = 2572

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 241 caccttcctcctcctcaccgtcacc 265
           ||||||||||||||||||| |||||
Sbjct: 353 caccttcctcctcctcaccttcacc 377
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>ref|NM_008702.2| Mus musculus nemo like kinase (Nlk), mRNA
          Length = 4461

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 241  caccttcctcctcctcaccgtcacc 265
            ||||||||||||||||||| |||||
Sbjct: 1216 caccttcctcctcctcaccttcacc 1240
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>dbj|AK024262.1| Homo sapiens cDNA FLJ14200 fis, clone NT2RP3002799
          Length = 3093

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 235 ggtctccaccttcctcctcct 255
           |||||||||||||||||||||
Sbjct: 954 ggtctccaccttcctcctcct 974
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>dbj|AK078118.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330513G01 product:nemo like
           kinase, full insert sequence
          Length = 3602

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 241 caccttcctcctcctcaccgtcacc 265
           ||||||||||||||||||| |||||
Sbjct: 379 caccttcctcctcctcaccttcacc 403
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>gb|AC048341.22| Homo sapiens 12 BAC RP11-631N16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 67400

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 235   ggtctccaccttcctcctcct 255
             |||||||||||||||||||||
Sbjct: 14624 ggtctccaccttcctcctcct 14644
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>dbj|AK041337.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630002L15 product:nemo like kinase, full
           insert sequence
          Length = 1876

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 241 caccttcctcctcctcaccgtcacc 265
           ||||||||||||||||||| |||||
Sbjct: 337 caccttcctcctcctcaccttcacc 361
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>gb|AC155320.2| Pan troglodytes BAC clone CH251-421K1 from chromosome unknown, complete
             sequence
          Length = 185966

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   gtatatgaatattatttgctttttt 139
             |||||| ||||||||||||||||||
Sbjct: 87216 gtatataaatattatttgctttttt 87240
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>gb|AC009161.14| Homo sapiens chromosome 16 clone RP11-75D3, complete sequence
          Length = 180222

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 115   gtatatgaatattatttgctttttt 139
             |||||| ||||||||||||||||||
Sbjct: 16447 gtatataaatattatttgctttttt 16471
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>ref|XM_344122.2| PREDICTED: Rattus norvegicus similar to nemo like kinase (LOC363942),
            mRNA
          Length = 4174

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 241  caccttcctcctcctcaccgtcacc 265
            ||||||||||||||||||| |||||
Sbjct: 1064 caccttcctcctcctcaccttcacc 1088
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>ref|XM_573152.1| PREDICTED: Rattus norvegicus similar to nemo like kinase (LOC497961),
            mRNA
          Length = 4442

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 241  caccttcctcctcctcaccgtcacc 265
            ||||||||||||||||||| |||||
Sbjct: 1221 caccttcctcctcctcaccttcacc 1245
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>gb|AF036332.1|AF036332 Mus musculus nemo-like kinase (Nlk) mRNA, complete cds
          Length = 2603

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 241 caccttcctcctcctcaccgtcacc 265
           ||||||||||||||||||| |||||
Sbjct: 395 caccttcctcctcctcaccttcacc 419
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>emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chromosome 2, complete
             sequence
          Length = 132674

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 241   caccttcctcctcctcaccgtcacc 265
             ||||||||||||||||||| |||||
Sbjct: 96460 caccttcctcctcctcaccttcacc 96436
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>gb|AC167963.5| Mus musculus chromosome 1, clone RP24-171A4, complete sequence
          Length = 172954

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   tctccaccttcctcctcctc 256
             ||||||||||||||||||||
Sbjct: 49911 tctccaccttcctcctcctc 49892
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    ccaccttcctcctcctcacc 259
              ||||||||||||||||||||
Sbjct: 853659 ccaccttcctcctcctcacc 853640
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>gb|AF519727.1| Betta smaragdina isolate B193 recombinase activating protein 1
           (RAG1) gene, partial cds
          Length = 1479

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 cctcctcctcaccgtcacct 266
           ||||||||||||||||||||
Sbjct: 430 cctcctcctcaccgtcacct 411
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>ref|XM_755516.1| Ustilago maydis 521 hypothetical protein (UM04462.1) partial mRNA
          Length = 2754

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  cttcctcctcctcaccgtcacctt 267
            |||||||||||||||| |||||||
Sbjct: 1144 cttcctcctcctcaccttcacctt 1121
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>gb|AC133182.3| Mus musculus BAC clone RP24-181H19 from chromosome 18, complete
             sequence
          Length = 163378

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   tctccaccttcctcctcctc 256
             ||||||||||||||||||||
Sbjct: 48920 tctccaccttcctcctcctc 48901
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>gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 188300

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    tctccaccttcctcctcctc 256
              ||||||||||||||||||||
Sbjct: 161856 tctccaccttcctcctcctc 161837
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>emb|AL121877.14|HSBB140E4 Human DNA sequence from clone RP13-140E4 on chromosome X Contains a
              staufen, RNA binding protein homolog 2, (Drosophila)
              (STAU2) pseudogene and an ubiquitin specific protease 1
              (USP1) pseudogene, complete sequence
          Length = 163253

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     aatcattccatatttttatt 35
              ||||||||||||||||||||
Sbjct: 107764 aatcattccatatttttatt 107745
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>emb|AL133456.1| Human DNA sequence from clone RP1-231P7P on chromosome 22q11.21-12.2
             Contains a ca repeat polymorphism, an STS and GSSs,
             complete sequence
          Length = 80485

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 243   ccttcctcctcctcaccgtcacct 266
             |||||||||||||||| |||||||
Sbjct: 39923 ccttcctcctcctcacagtcacct 39946
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>ref|XM_793784.1| PREDICTED: Strongylocentrotus purpuratus similar to Inositol
           hexakisphosphate kinase 2 (InsP6 kinase 2) (Inositol
           hexakisphosphate kinase 2) (P(i)-uptake stimulator)
           (PiUS) (LOC594340), mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  gacatgtacaaaggggatgt 116
           ||||||||||||||||||||
Sbjct: 346 gacatgtacaaaggggatgt 365
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>gb|AC184714.1| Macaca mulatta clone CH250-396P23 map human ortholog 8p23.1, complete
              sequence
          Length = 174987

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    tctccaccttcctcctcctc 256
              ||||||||||||||||||||
Sbjct: 128598 tctccaccttcctcctcctc 128617
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>gb|AC184713.1| Macaca mulatta clone CH250-569D9 map human ortholog 8p23.1, complete
              sequence
          Length = 153308

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    tctccaccttcctcctcctc 256
              ||||||||||||||||||||
Sbjct: 114032 tctccaccttcctcctcctc 114051
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>gb|AC184712.1| Macaca mulatta clone CH250-14G4 map human ortholog 8p23.1, complete
              sequence
          Length = 190509

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    tctccaccttcctcctcctc 256
              ||||||||||||||||||||
Sbjct: 146843 tctccaccttcctcctcctc 146862
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>gb|AC184711.1| Macaca mulatta clone CH250-63N16 map human ortholog 8p23.1, complete
              sequence
          Length = 200536

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    tctccaccttcctcctcctc 256
              ||||||||||||||||||||
Sbjct: 161350 tctccaccttcctcctcctc 161369
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>emb|X58518.1|GGCADHB Chicken mRNA for B-cadherin
          Length = 2436

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  ccaccttcctcctcctcacc 259
            ||||||||||||||||||||
Sbjct: 1738 ccaccttcctcctcctcacc 1719
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>emb|BX248411.3| Mouse DNA sequence from clone RP23-130D7 on chromosome 11 Contains the
             5' end of the Ncor1 gene for nuclear receptor co-repressor
             1, a novel gene, the 5' end of the gene for the ortholog
             of human and rat class L phosphatidylinositol glycan PIGL
             and a CpG island, complete sequence
          Length = 72368

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    tgtatggacatgtacaaagg 110
             ||||||||||||||||||||
Sbjct: 40871 tgtatggacatgtacaaagg 40890
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>gb|AC069381.8| Homo sapiens chromosome 15, clone RP11-604N3, complete sequence
          Length = 191659

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   tccaccttcctcctcctcac 258
             ||||||||||||||||||||
Sbjct: 54397 tccaccttcctcctcctcac 54416
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>gb|AC094104.2| Homo sapiens chromosome 5 clone RP11-438C19, complete sequence
          Length = 199531

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    atcattccatatttttattc 36
             ||||||||||||||||||||
Sbjct: 22330 atcattccatatttttattc 22349
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>emb|CR387414.1| Gallus gallus finished cDNA, clone ChEST21c1
          Length = 1511

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 240 ccaccttcctcctcctcacc 259
           ||||||||||||||||||||
Sbjct: 833 ccaccttcctcctcctcacc 814
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>gb|M81894.1|CHKKCAM Chicken B-cadherin (K-CAM) gene, complete cds and L-CAM gene, 5' end
          Length = 4434

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  ccaccttcctcctcctcacc 259
            ||||||||||||||||||||
Sbjct: 2876 ccaccttcctcctcctcacc 2857
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>dbj|AK048890.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230078P07
            product:unclassifiable, full insert sequence
          Length = 3370

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 237  tctccaccttcctcctcctc 256
            ||||||||||||||||||||
Sbjct: 1359 tctccaccttcctcctcctc 1378
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>gb|AC154122.7| Mus musculus chromosome 15, clone RP24-62G16, complete sequence
          Length = 215079

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 229   gcctgtggtctccaccttcctcct 252
             |||| |||||||||||||||||||
Sbjct: 90136 gcctctggtctccaccttcctcct 90159
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>gb|AC024038.6|AC024038 Homo sapiens BAC clone RP11-349O6 from Y, complete sequence
          Length = 83621

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    aatcattccatatttttatt 35
             ||||||||||||||||||||
Sbjct: 75023 aatcattccatatttttatt 75004
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>gb|DQ020488.1| Sus scrofa clone BAC KNP_798F4, complete sequence
          Length = 125904

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     ctgaattcattcctgggggt 65
              ||||||||||||||||||||
Sbjct: 119506 ctgaattcattcctgggggt 119487
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>gb|AC008417.3|AC008417 Homo sapiens chromosome 5 clone CTC-287O8, complete sequence
          Length = 216067

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    ttaccatttaccaattacca 170
              ||||||||||||||||||||
Sbjct: 123668 ttaccatttaccaattacca 123687
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>gb|AC155838.7| Mus musculus 6 BAC RP24-441P8 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 196288

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 237  tctccaccttcctcctcctc 256
            ||||||||||||||||||||
Sbjct: 8257 tctccaccttcctcctcctc 8238
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>emb|BX296566.5| Zebrafish DNA sequence from clone CH211-196F4 in linkage group 11,
             complete sequence
          Length = 128109

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   tatatgaatattatttgctttttt 139
             ||||||||||||||||| ||||||
Sbjct: 39889 tatatgaatattatttgttttttt 39912
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>gb|AC111031.8| Mus musculus chromosome 18, clone RP23-447L21, complete sequence
          Length = 177570

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   tctccaccttcctcctcctc 256
             ||||||||||||||||||||
Sbjct: 54608 tctccaccttcctcctcctc 54627
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>emb|AL096757.1|HSJ231P7P Human DNA sequence from clone 231P7p on chromosome 22q11.21-12.2
             Contains CA repeat and STS, complete sequence
          Length = 80485

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 243   ccttcctcctcctcaccgtcacct 266
             |||||||||||||||| |||||||
Sbjct: 39923 ccttcctcctcctcacagtcacct 39946
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>gb|AC167139.9| Mus musculus chromosome 1, clone RP23-397C14, complete sequence
          Length = 198105

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    tctccaccttcctcctcctc 256
              ||||||||||||||||||||
Sbjct: 189419 tctccaccttcctcctcctc 189400



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    tctccaccttcctcctcctc 256
              ||||||||||||||||||||
Sbjct: 117587 tctccaccttcctcctcctc 117568


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,742,731
Number of Sequences: 3902068
Number of extensions: 3742731
Number of successful extensions: 84537
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84345
Number of HSP's gapped (non-prelim): 192
length of query: 297
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 275
effective length of database: 17,147,199,772
effective search space: 4715479937300
effective search space used: 4715479937300
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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