Clone Name | rbart38b09 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 111 bits (278), Expect = 4e-25 Identities = 49/52 (94%), Positives = 51/52 (98%) Frame = -1 Query: 360 ADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 205 ADDKS+QWVHPKNVYY VAPV+QKKDNYGGIMLWDRYFDKQTNYSSLIKYYA Sbjct: 253 ADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 304
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 60.1 bits (144), Expect = 1e-09 Identities = 24/41 (58%), Positives = 30/41 (73%) Frame = -1 Query: 327 KNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 205 K +YY + P QK NYGGIMLWDR++DKQT Y +KY+A Sbjct: 264 KQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 45.1 bits (105), Expect = 4e-05 Identities = 16/38 (42%), Positives = 26/38 (68%) Frame = -1 Query: 339 WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYS 226 W+ K++YY + + NYGG+ ++DRYFDK+ NY+ Sbjct: 250 WMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 45.1 bits (105), Expect = 4e-05 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%) Frame = -1 Query: 330 PKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 214 P NV S + PV ++ YGG+MLW +Y+D Q+ YSS IK Sbjct: 259 PANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIK 298
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 40.0 bits (92), Expect = 0.001 Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -1 Query: 330 PKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 214 PK V S V P + YGG+MLW+R FD Q YSS I+ Sbjct: 252 PKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSSAIR 291
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 38.9 bits (89), Expect = 0.003 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = -1 Query: 309 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 214 V P + YGG+M+WDR+ D Q+ YS+ IK Sbjct: 259 VLPAIKTSPKYGGVMIWDRFNDAQSGYSNAIK 290
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 38.1 bits (87), Expect = 0.005 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -1 Query: 339 WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 217 +V P + + P +K YGG+MLW +++D + YSS I Sbjct: 255 YVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSSSI 295
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 37.4 bits (85), Expect = 0.009 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -1 Query: 339 WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 217 ++ P + + P +K YGG+MLW +++D + YSS I Sbjct: 258 YIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSI 298
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 37.0 bits (84), Expect = 0.012 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -1 Query: 309 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 217 V P + YGG+MLWDR+ D Q+ YS I Sbjct: 264 VLPTIKGSSKYGGVMLWDRFNDGQSGYSGAI 294
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 33.1 bits (74), Expect = 0.17 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = -1 Query: 330 PKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 214 P +V S V P+ YGG+MLW +++D YSS IK Sbjct: 251 PSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSSAIK 288
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 33.1 bits (74), Expect = 0.17 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = -1 Query: 330 PKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 214 P +V S V P + NYGG+MLW + FD YS IK Sbjct: 251 PADVLISQVLPTIKASSNYGGVMLWSKAFD--NGYSDSIK 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 30.8 bits (68), Expect = 0.85 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = -1 Query: 339 WVHPKNVYYSVAP-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 211 ++ P + V P + + Y GI LW+R DK+T YS ++I+Y Sbjct: 263 YIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>HFW1_DROME (Q9W568) Protein halfway precursor (Protein singed wings)| Length = 611 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +2 Query: 80 CTTNCSIIFIYPSTSLTLFSLAAIHQNQIDGDASVACASI 199 C TNC +I Y S + TL ++ I NQ V C+++ Sbjct: 366 CVTNCPVIPNYGSCNCTLENIMIIQDNQSKPQCHVDCSNL 405
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 Query: 309 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 214 V P + YGG+MLW + +D + YSS IK Sbjct: 261 VLPTIKGSAKYGGVMLWSKAYD--SGYSSAIK 290
>RUMA_RALSO (Q8Y035) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)| (23S rRNA(M-5-U1939)-methyltransferase) Length = 450 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 77 ICTTNCSIIFIYPSTSLTLFSLAAIHQNQIDGDASVACASI 199 + T C ++ I S +LT +LA N +DG + AC ++ Sbjct: 310 MATRGCEVMGIEGSEALTTRALANAQHNGLDGKTTFACRNL 350
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/33 (51%), Positives = 17/33 (51%) Frame = +3 Query: 252 TGPRA*CRRSCPSSATPARRCSRRSWGVPTGRT 350 TGPRA C R SS PARR R PT T Sbjct: 968 TGPRA-CPREAESSEEPARRHRARHKAPPTQET 999 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,448,766 Number of Sequences: 219361 Number of extensions: 690920 Number of successful extensions: 1650 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1618 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1648 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)