>FOXE3_HUMAN (Q13461) Forkhead box protein E3 (Forkhead-related protein FKHL12)|
           (Forkhead-related transcription factor 8) (FREAC-8)
          Length = 319

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 5/31 (16%)
 Frame = +3

Query: 231 LVRPGTRPGTG-----PVLPVAGPVHGLGPV 308
           LV P TRPG G     P+L +AGP   LGP+
Sbjct: 269 LVLPATRPGPGPLPAEPLLALAGPAAALGPL 299

>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 25.8 bits (55), Expect(2) = 2.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 319  DCRSSLPPSGRRSAASSGFTSAPSPSP 399
            +C++  PP+G R +++      P PSP
Sbjct: 1503 NCQARPPPAGTRGSSTEDGPGVPPPSP 1529



 Score = 22.7 bits (47), Expect(2) = 2.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 240  PGTRPGTGPVLPVAGP 287
            P T PG GP+L   GP
Sbjct: 1455 PPTAPGVGPLLLQLGP 1470

>CPN_DROME (Q02910) Calphotin|
          Length = 864

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = +3

Query: 204 AHSPRVGPVLVRPGTRPGTGPVLPVAGPVHGLGPVYRPRLPLLAAAVGPPV 356
           A +P V PV+  P   P    V PVA PV  +        P+LA AV P V
Sbjct: 150 AVTPVVSPVIATPPVVPANTTV-PVAAPVAAVPAAVPVVAPVLAPAVAPAV 199

>GCSP_STRCO (Q9AK84) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 961

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +3

Query: 213 PRVGPVLVRPGTRP--GTGPVLPVAGPVHGLGPV 308
           P VGPV VR    P     P+ P AGP  G+GP+
Sbjct: 720 PGVGPVGVRSHLAPYLPNHPLQPAAGPQTGVGPI 753

>GCSP_STRAW (Q827D7) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 961

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +3

Query: 213 PRVGPVLVRPGTRP--GTGPVLPVAGPVHGLGPV 308
           P VGPV VR    P     P+ P AGP  G+GP+
Sbjct: 720 PGVGPVGVRAHLAPYLPNHPLQPEAGPATGVGPI 753

>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 210 SPRVGPVLVRPGTRPGTGPVLPVAGPVHGLGPVYRPRL--PLLAAAVGPPV 356
           SP  GP   +PG+ P  GP     GP+   GP   P L  P  A A GPP+
Sbjct: 672 SPPAGPGTFKPGS-PTVGP-----GPLPPAGPSGLPSLPPPPAAPASGPPL 716

>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1186

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 210 SPRVGPVLVRPGTRPGTGPVLPVAGPVHGLGPVYRPRL--PLLAAAVGPPV 356
           SP  GP   +PG+ P  GP     GP+   GP   P L  P  A A GPP+
Sbjct: 673 SPPAGPGTFKPGS-PTVGP-----GPLPPAGPSGLPSLPPPPAAPASGPPL 717

>K10_DROME (P13468) DNA-binding protein K10 (Female sterile protein K10)|
          Length = 463

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 213 PRVGPVLVRPGTRPGTGPVLPVAGPVHGLGPVYRPR 320
           P   P L      PG GP++ V  P+H +GP   PR
Sbjct: 285 PPPPPPLFMRRNGPGPGPMMGVPPPMHMMGPRMPPR 320

>CTGE4_HUMAN (Q8IX94) Cutaneous T-cell lymphoma-associated antigen 4 (cTAGE-4|
           protein)
          Length = 504

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +3

Query: 204 AHSPRVGPVLVRPGTRPGTGPVLPV--AGPVHGLGPVYRPRLP 326
           A +   GP L+ P   P +GP+ PV   GP    GP + P  P
Sbjct: 410 AENEATGPGLIPPPLAPISGPLFPVDTRGPFMRRGPPFPPPPP 452

>JIP1_RAT (Q9R237) C-jun-amino-terminal kinase-interacting protein 1|
           (JNK-interacting protein 1) (JIP-1) (JNK MAP kinase
           scaffold protein 1) (Islet-brain-1) (IB-1)
           (Mitogen-activated protein kinase 8-interacting protein
           1) (JIP-1-related protein) (JRP)
          Length = 708

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +3

Query: 204 AHSPRVGPVLVRPGTRPGTGPVLPVAGPVHGLGPVYRPRLP 326
           A  P VGP     G  P +       GP  G G  YRP+ P
Sbjct: 118 AQRPGVGPSKAESGQEPASRSQGQGQGPGTGSGDTYRPKRP 158

>GLIS1_HUMAN (Q8NBF1) Zinc finger protein GLIS1 (GLI-similar 1)|
          Length = 620

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 219 VGPVLVRPGTRPGTGPVL--PVAGPVHGLGPVYRPRLP 326
           + P+ +   TR G GP L  P+  P+ GLGP   P LP
Sbjct: 441 LSPLPMAESTRDGLGPGLLSPIVSPLKGLGP---PPLP 475

>CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC domain-containing|
           protein 1) (CXXC finger protein 1)
          Length = 660

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 395 DGDGADVKPEEAADRRPDGGSEERQSWPIY 306
           +GDG+D++P +A D   D  SE  ++ PIY
Sbjct: 2   EGDGSDLEPPDAGD---DSKSENGENAPIY 28

>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)|
          Length = 3969

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/40 (45%), Positives = 19/40 (47%)
 Frame = +3

Query: 237 RPGTRPGTGPVLPVAGPVHGLGPVYRPRLPLLAAAVGPPV 356
           RPGT  G G      G   GLG   R R+P L    GPPV
Sbjct: 12  RPGTTGGGG-----GGGRRGLGGGPRQRVPALLLPPGPPV 46


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,538,398
Number of Sequences: 219361
Number of extensions: 884817
Number of successful extensions: 3587
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3579
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)