ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart38b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018502.1| Zea mays clone EL01N0427E10.d mRNA sequence 48 0.025
2ref|XM_635257.1| Dictyostelium discoideum hypothetical protein (... 46 0.10
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.40
5emb|AL844876.4|CNS08CAZ Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.40
6ref|NM_120263.3| Arabidopsis thaliana ATP binding / kinase/ prot... 42 1.6
7gb|BT018199.1| Zea mays clone EL01N0559D07.c mRNA sequence 42 1.6
8gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
9emb|AL441964.4| Human DNA sequence from clone RP11-151G12 on chr... 42 1.6
10emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 42 1.6
11emb|AL162351.1|ATT20L15 Arabidopsis thaliana DNA chromosome 5, B... 42 1.6
12gb|AC005897.3| Arabidopsis thaliana chromosome 2 clone T10J7 map... 42 1.6
13gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 42 1.6
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
15emb|BX830646.1|CNS0A020 Arabidopsis thaliana Full-length cDNA Co... 42 1.6
16gb|AC007918.2|F28J9 Arabidopsis thaliana chromosome 1 BAC F28J9 ... 42 1.6
17gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
18gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genom... 40 6.2
19gb|AF539999.1| Mamestra configurata nucleopolyhedrovirus A 90/4,... 40 6.2
20ref|NM_121165.2| Arabidopsis thaliana OCP3 (OVEREXPRESSOR OF CAT... 40 6.2
21ref|NM_184180.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
22ref|XM_475597.1| Oryza sativa (japonica cultivar-group), predic... 40 6.2
23ref|XM_469886.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
24ref|NM_189761.1| Oryza sativa (japonica cultivar-group), predic... 40 6.2
25gb|AY185586.1| Aeromonas allosaccharophila strain CECT 4200 RNA ... 40 6.2
26gb|AY169348.1| Aeromonas allosaccharophila strain CECT 4199 RNA ... 40 6.2
27gb|AY169333.1| Aeromonas veronii bv. Sobria strain CECT 4246 RNA... 40 6.2
28gb|U39470.1| Caenorhabditis elegans cosmid T08H4, complete sequence 40 6.2
29ref|XM_882556.1| PREDICTED: Bos taurus similar to Delta-like pro... 40 6.2
30ref|XM_596946.2| PREDICTED: Bos taurus similar to Delta-like pro... 40 6.2
31ref|XM_869332.1| PREDICTED: Bos taurus similar to Delta-like pro... 40 6.2
32gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
33ref|XM_869163.1| PREDICTED: Bos taurus similar to leucine rich r... 40 6.2
34ref|XM_714221.1| Candida albicans SC5314 hypothetical protein (C... 40 6.2
35ref|XM_657016.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 6.2
36gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.2
37gb|AC102575.11| Mus musculus chromosome 14, clone RP23-239P22, c... 40 6.2
38gb|U59461.2|MBU59461 Mamestra configurata NPV-A strain 90/2, com... 40 6.2
39ref|XM_846920.1| PREDICTED: Canis familiaris hypothetical protei... 40 6.2
40gb|DQ483705.1| Gymnogyps californianus clone 128F microsatellite... 40 6.2
41ref|XM_752296.1| Ustilago maydis 521 hypothetical protein (UM012... 40 6.2
42emb|Z81065.1|CEF16C3 Caenorhabditis elegans Cosmid F16C3, comple... 40 6.2
43gb|AC127250.3| Mus musculus BAC clone RP24-482H23 from chromosom... 40 6.2
44ref|XM_813920.1| Trypanosoma cruzi strain CL Brener mucin-associ... 40 6.2
45gb|AC127382.4| Homo sapiens BAC clone RP11-1380M11 from UL, comp... 40 6.2
46ref|XM_674605.1| Plasmodium berghei strain ANKA hypothetical pro... 40 6.2
47ref|NM_205519.1| Gallus gallus ATPase, Ca++ transporting, cardia... 40 6.2
48gb|AC112677.8| Mus musculus chromosome 3, clone RP23-176J23, com... 40 6.2
49emb|AL354713.7| Human DNA sequence from clone RP11-498A13 on chr... 40 6.2
50gb|AY127869.1| Aeromonas culicicola MTCC 3249 RNA polymerase sig... 40 6.2
51gb|AY127867.1| Aeromonas allosaccharophila RNA polymerase sigma ... 40 6.2
52gb|AY127860.1| Aeromonas veronii bv. Sobria RNA polymerase sigma... 40 6.2
53gb|AC010282.6| Homo sapiens chromosome 5 clone CTC-555I19, compl... 40 6.2
54ref|NM_204195.1| Gallus gallus SRY (sex determining region Y)-bo... 40 6.2
55emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 6.2
56emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BA... 40 6.2
57emb|AL031262.2|SPBC30B4 S.pombe chromosome II cosmid c30B4 40 6.2
58gb|BT008743.1| Arabidopsis thaliana At5g11270 gene, complete cds 40 6.2
59emb|AJ245811.1|RSO245811 Ralstonia solanacearum DNA for hrp gene... 40 6.2
60gb|AC021630.11| Mus musculus chromosome 14, clone RP23-178B24, c... 40 6.2
61dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 40 6.2
62gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genom... 40 6.2
63gb|AC004680.3| Arabidopsis thaliana chromosome 2 clone F23F1 map... 40 6.2
64gb|AC009036.7| Homo sapiens chromosome 16 clone RP11-142L23, com... 40 6.2
65gb|AY838859.1| Dorvillea erucaeformis 28S ribosomal RNA gene, pa... 40 6.2
66gb|AC175205.2| Sporobolomyces roseus clone JGIBAIF-5L1, complete... 40 6.2
67gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 40 6.2
68gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 40 6.2
69gb|AC018501.9| Homo sapiens chromosome 3 clone RP11-283K15 map 3... 40 6.2
70gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 40 6.2
71ref|NM_001021435.1| Schizosaccharomyces pombe 972h- hypothetical... 40 6.2
72gb|AC009063.8| Homo sapiens chromosome 16 clone RP11-298D21, com... 40 6.2
73dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
74dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
75dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
76dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
77dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
78gb|AC012320.6|AC012320 Homo sapiens chromosome 16 clone RP11-280... 40 6.2
79emb|BX831226.1|CNS09YSK Arabidopsis thaliana Full-length cDNA Co... 40 6.2
80gb|AC037424.10|AC037424 Arabidopsis thaliana chromosome 1 BAC F1... 40 6.2
81gb|AF038543.1|AF038543 Rhodococcus sp. ATCC15963 DNA polymerase ... 40 6.2
82gb|AC027138.10| Staphylococcus aureus clone sabac-9, complete se... 40 6.2
83dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
84dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.2
85gb|AC024619.16| Homo sapiens chromosome 17, clone RP11-321A17, c... 40 6.2
86gb|AC091050.3| Homo sapiens chromosome 8, clone RP11-242F4, comp... 40 6.2
87dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
88dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 6.2
89dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.2
90dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
91dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 40 6.2
92dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.2
93dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
94dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.2
95dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
96dbj|AK119998.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
97dbj|AK099659.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
98emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 6.2
99gb|BT002017.1| Arabidopsis thaliana putative protein (At5g11270)... 40 6.2
100gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 6.2
101emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 40 6.2
102dbj|AP006207.1| Homo sapiens genomic DNA, chromosome 8, clone:RP... 40 6.2
103gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.2
104gb|AF048833.1|AF048833 Streptomyces peucetius polyketide cyclase... 40 6.2
105emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.2
106emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.2
107emb|Z95620.1|SPBC3D6 S.pombe chromosome II cosmid c3D6 40 6.2
108gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.2
109emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on ch... 40 6.2
110emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 40 6.2
111gb|AC090955.3| Homo sapiens chromosome 3 clone RP11-622A14 map 3... 40 6.2
112gb|AC172750.1| Mus musculus BAC clone RP24-177J9 from chromosome... 40 6.2
113emb|AL136374.4| Human DNA sequence from clone RP1-244G5 on chrom... 40 6.2
114emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on ch... 40 6.2
115gb|AC167813.4| Mus musculus BAC clone RP24-233L18 from chromosom... 40 6.2
116gb|M26064.1|CHKATPCA Chicken Ca2+ ATPase, complete cds 40 6.2
117dbj|AB011803.1| Gallus gallus mRNA for SOX3, complete cds 40 6.2
118dbj|AB027890.1| Schizosaccharomyces pombe gene for Hypothetical ... 40 6.2
119dbj|AB020860.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-onco... 40 6.2
120dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2 
>gb|BT018502.1| Zea mays clone EL01N0427E10.d mRNA sequence
          Length = 1544

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 287  ggtacacgggcttgggccggtatatcggccacgactgccgctcc 330
            ||||||| ||| |||||||||| || |||||||||||| |||||
Sbjct: 1271 ggtacacaggcctgggccggtaaatgggccacgactgcggctcc 1228
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>ref|XM_635257.1| Dictyostelium discoideum hypothetical protein (DDB0218367), partial
           mRNA
          Length = 2947

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 138 ttatattattatttgatgatgct 160
           |||||||||||||||||||||||
Sbjct: 899 ttatattattatttgatgatgct 877
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 331      tcgctgccgccgtcgggccgcc 352
                ||||||||||||||||||||||
Sbjct: 15214040 tcgctgccgccgtcgggccgcc 15214019



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 348      ccgccggtccgctgcctcct 367
                ||||||||||||||||||||
Sbjct: 20920812 ccgccggtccgctgcctcct 20920793
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 331      tcgctgccgccgtcgggccgcc 352
                ||||||||||||||||||||||
Sbjct: 15168323 tcgctgccgccgtcgggccgcc 15168302



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 348      ccgccggtccgctgcctcct 367
                ||||||||||||||||||||
Sbjct: 20847026 ccgccggtccgctgcctcct 20847007
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>emb|AL844876.4|CNS08CAZ Oryza sativa chromosome 12, . BAC OSJNBa0063F10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153687

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 331   tcgctgccgccgtcgggccgcc 352
             ||||||||||||||||||||||
Sbjct: 41878 tcgctgccgccgtcgggccgcc 41899
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>ref|NM_120263.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
           serine/threonine kinase/ protein-tyrosine kinase
           AT5G01850 mRNA, complete cds
          Length = 1784

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 422 cgtcttcgtcttcttcgtctc 442
           |||||||||||||||||||||
Sbjct: 1   cgtcttcgtcttcttcgtctc 21
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>gb|BT018199.1| Zea mays clone EL01N0559D07.c mRNA sequence
          Length = 906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 287 ggtacacgggcttgggccggtatatcggccacg 319
           ||||||||||| | ||||||||||| |||||||
Sbjct: 634 ggtacacgggcgtaggccggtatatgggccacg 602
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>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0485F09, complete sequence
          Length = 161276

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 332   cgctgccgccgtcgggccgcc 352
             |||||||||||||||||||||
Sbjct: 68784 cgctgccgccgtcgggccgcc 68804
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>emb|AL441964.4| Human DNA sequence from clone RP11-151G12 on chromosome X Contains a
             mortality factor 4 like 1 (MORF4L1) pseudogene and a novel
             pseudogene, complete sequence
          Length = 92775

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 132   tgatgcttatattattatttg 152
             |||||||||||||||||||||
Sbjct: 14746 tgatgcttatattattatttg 14726
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 327    ctcctcgctgccgccgtcgggccgc 351
              |||| ||||||||||||||||||||
Sbjct: 107587 ctccacgctgccgccgtcgggccgc 107611
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>emb|AL162351.1|ATT20L15 Arabidopsis thaliana DNA chromosome 5, BAC clone T20L15 (ESSA project)
          Length = 96565

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 422   cgtcttcgtcttcttcgtctc 442
             |||||||||||||||||||||
Sbjct: 56961 cgtcttcgtcttcttcgtctc 56981
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>gb|AC005897.3| Arabidopsis thaliana chromosome 2 clone T10J7 map mi398, complete
             sequence
          Length = 87119

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 424   tcttcgtcttcttcgtctcgc 444
             |||||||||||||||||||||
Sbjct: 62923 tcttcgtcttcttcgtctcgc 62903
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 299    tgggccggtatatcggccacg 319
              |||||||||||||||||||||
Sbjct: 319344 tgggccggtatatcggccacg 319324
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 332      cgctgccgccgtcgggccgcc 352
                |||||||||||||||||||||
Sbjct: 25461893 cgctgccgccgtcgggccgcc 25461913
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>emb|BX830646.1|CNS0A020 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB9ZF01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1647

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 422 cgtcttcgtcttcttcgtctc 442
           |||||||||||||||||||||
Sbjct: 1   cgtcttcgtcttcttcgtctc 21
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>gb|AC007918.2|F28J9 Arabidopsis thaliana chromosome 1 BAC F28J9 sequence, complete sequence
          Length = 115963

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 424   tcttcgtcttcttcgtctcgc 444
             |||||||||||||||||||||
Sbjct: 94810 tcttcgtcttcttcgtctcgc 94830
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 332      cgctgccgccgtcgggccgcc 352
                |||||||||||||||||||||
Sbjct: 25780563 cgctgccgccgtcgggccgcc 25780583
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>gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete
             sequence
          Length = 126163

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gtgatgcttatattattatt 150
             ||||||||||||||||||||
Sbjct: 46264 gtgatgcttatattattatt 46283
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>gb|AF539999.1| Mamestra configurata nucleopolyhedrovirus A 90/4, complete genome
          Length = 153656

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 87195 cgtcttcgtcttcttcgtct 87176
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>ref|NM_121165.2| Arabidopsis thaliana OCP3 (OVEREXPRESSOR OF CATIONIC PEROXIDASE 3)
           AT5G11270 (OCP3) mRNA, complete cds
          Length = 1344

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 423 gtcttcgtcttcttcgtctc 442
           ||||||||||||||||||||
Sbjct: 211 gtcttcgtcttcttcgtctc 230
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>ref|NM_184180.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 960

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 411 ttcgcggacggcgtcttcgtcttc 434
           ||||||||||||| ||||||||||
Sbjct: 137 ttcgcggacggcgccttcgtcttc 114
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>ref|XM_475597.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 246

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 cggcgtcttcgtcttcttcg 438
           ||||||||||||||||||||
Sbjct: 66  cggcgtcttcgtcttcttcg 47
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>ref|XM_469886.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1350

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 411 ttcgcggacggcgtcttcgtcttc 434
           ||||||| ||||||||||||||||
Sbjct: 185 ttcgcggccggcgtcttcgtcttc 162
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>ref|NM_189761.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 648

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 411 ttcgcggacggcgtcttcgtcttc 434
           ||||||| ||||||||||||||||
Sbjct: 144 ttcgcggccggcgtcttcgtcttc 121
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>gb|AY185586.1| Aeromonas allosaccharophila strain CECT 4200 RNA polymerase
           sigma-70 factor (rpoD) gene, partial cds
          Length = 819

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 276 cgtcttcgtcttcttcgtct 257
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>gb|AY169348.1| Aeromonas allosaccharophila strain CECT 4199 RNA polymerase
           sigma-70 factor (rpoD) gene, partial cds
          Length = 819

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 276 cgtcttcgtcttcttcgtct 257
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>gb|AY169333.1| Aeromonas veronii bv. Sobria strain CECT 4246 RNA polymerase
           sigma-70 factor (rpoD) gene, partial cds
          Length = 819

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 276 cgtcttcgtcttcttcgtct 257
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>gb|U39470.1| Caenorhabditis elegans cosmid T08H4, complete sequence
          Length = 38006

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 35713 cgtcttcgtcttcttcgtct 35694
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>ref|XM_882556.1| PREDICTED: Bos taurus similar to Delta-like protein 4 precursor
            (Drosophila Delta homolog 4), transcript variant 3
            (LOC518746), mRNA
          Length = 2246

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 333  gctgccgccgtcgggccgcc 352
            ||||||||||||||||||||
Sbjct: 1966 gctgccgccgtcgggccgcc 1947
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>ref|XM_596946.2| PREDICTED: Bos taurus similar to Delta-like protein 4 precursor
            (Drosophila Delta homolog 4), transcript variant 1
            (LOC518746), mRNA
          Length = 3346

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 333  gctgccgccgtcgggccgcc 352
            ||||||||||||||||||||
Sbjct: 1912 gctgccgccgtcgggccgcc 1893
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>ref|XM_869332.1| PREDICTED: Bos taurus similar to Delta-like protein 4 precursor
            (Drosophila Delta homolog 4), transcript variant 2
            (LOC518746), mRNA
          Length = 3400

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 333  gctgccgccgtcgggccgcc 352
            ||||||||||||||||||||
Sbjct: 1966 gctgccgccgtcgggccgcc 1947
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>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04,
             complete sequence
          Length = 133271

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   cggcgtcttcgtcttcttcg 438
             ||||||||||||||||||||
Sbjct: 93482 cggcgtcttcgtcttcttcg 93501
to top
>ref|XM_869163.1| PREDICTED: Bos taurus similar to leucine rich repeat (in FLII)
          interacting protein 1 (LOC616994), mRNA
          Length = 3679

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 68 tagagggcagggctgggccc 87
          ||||||||||||||||||||
Sbjct: 60 tagagggcagggctgggccc 79
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>ref|XM_714221.1| Candida albicans SC5314 hypothetical protein (CaO19_7552), mRNA
          Length = 2619

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 523 cgtcttcgtcttcttcgtct 504
to top
>ref|XM_657016.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4504.2), mRNA
          Length = 1995

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 487 cgtcttcgtcttcttcgtct 468
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 411      ttcgcggacggcgtcttcgtcttc 434
                ||||||| ||||||||||||||||
Sbjct: 31335325 ttcgcggccggcgtcttcgtcttc 31335348



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 131      gtgatgcttatattattatt 150
                ||||||||||||||||||||
Sbjct: 16121084 gtgatgcttatattattatt 16121103
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>gb|AC102575.11| Mus musculus chromosome 14, clone RP23-239P22, complete sequence
          Length = 238123

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    cgtcttcgtcttcttcgtct 441
              ||||||||||||||||||||
Sbjct: 122359 cgtcttcgtcttcttcgtct 122340
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>gb|U59461.2|MBU59461 Mamestra configurata NPV-A strain 90/2, complete genome
          Length = 155060

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 88593 cgtcttcgtcttcttcgtct 88574
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>ref|XM_846920.1| PREDICTED: Canis familiaris hypothetical protein LOC609627
           (LOC609627), mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  agagggcagggctgggcccg 88
           ||||||||||||||||||||
Sbjct: 200 agagggcagggctgggcccg 219
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>gb|DQ483705.1| Gymnogyps californianus clone 128F microsatellite sequence
          Length = 437

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 242 cgtcttcgtcttcttcgtct 223
to top
>ref|XM_752296.1| Ustilago maydis 521 hypothetical protein (UM01242.1) partial mRNA
          Length = 2118

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 991 cgtcttcgtcttcttcgtct 972
to top
>emb|Z81065.1|CEF16C3 Caenorhabditis elegans Cosmid F16C3, complete sequence
          Length = 16928

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 12708 cgtcttcgtcttcttcgtct 12727
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>gb|AC127250.3| Mus musculus BAC clone RP24-482H23 from chromosome 3, complete sequence
          Length = 136942

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    attatagatcaaatgaaata 41
             ||||||||||||||||||||
Sbjct: 28521 attatagatcaaatgaaata 28502
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>ref|XM_813920.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053506067.169) partial mRNA
          Length = 798

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 358 cgtcttcgtcttcttcgtct 339
to top
>gb|AC127382.4| Homo sapiens BAC clone RP11-1380M11 from UL, complete sequence
          Length = 179507

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     cacaagaaattacaaacata 22
             ||||||||||||||||||||
Sbjct: 15167 cacaagaaattacaaacata 15186
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>ref|XM_674605.1| Plasmodium berghei strain ANKA hypothetical protein (PB106171.00.0)
            partial mRNA
          Length = 12046

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ttatattattatttgatgat 157
            ||||||||||||||||||||
Sbjct: 5312 ttatattattatttgatgat 5293
to top
>ref|NM_205519.1| Gallus gallus ATPase, Ca++ transporting, cardiac muscle, fast twitch
            1 (ATP2A1), mRNA
          Length = 3189

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  cacgtccgcgccgtctccgtcgcc 398
            |||||| |||||||||||||||||
Sbjct: 1361 cacgtcagcgccgtctccgtcgcc 1338
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>gb|AC112677.8| Mus musculus chromosome 3, clone RP23-176J23, complete sequence
          Length = 215247

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    attatagatcaaatgaaata 41
             ||||||||||||||||||||
Sbjct: 25982 attatagatcaaatgaaata 26001
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>emb|AL354713.7| Human DNA sequence from clone RP11-498A13 on chromosome 1 Contains a
             processed pseudogene for nuclear receptor binding factor 2
             (NRBF2), a processed pseudogene similar to part of
             olfactory receptor, family 11, subfamily H, member 6
             (OR11H6) and the 5' end of the CD53 gene for CD53 antigen,
             complete sequence
          Length = 138370

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    ctagcaaagtaatgcaagat 115
             ||||||||||||||||||||
Sbjct: 73423 ctagcaaagtaatgcaagat 73404
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>gb|AY127869.1| Aeromonas culicicola MTCC 3249 RNA polymerase sigma factor D gene,
           partial cds
          Length = 844

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 304 cgtcttcgtcttcttcgtct 285
to top
>gb|AY127867.1| Aeromonas allosaccharophila RNA polymerase sigma factor D gene,
           partial cds
          Length = 844

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 304 cgtcttcgtcttcttcgtct 285
to top
>gb|AY127860.1| Aeromonas veronii bv. Sobria RNA polymerase sigma factor D gene,
           partial cds
          Length = 844

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 304 cgtcttcgtcttcttcgtct 285
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>gb|AC010282.6| Homo sapiens chromosome 5 clone CTC-555I19, complete sequence
          Length = 191131

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      acaagaaattacaaacatat 23
              ||||||||||||||||||||
Sbjct: 134065 acaagaaattacaaacatat 134046
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>ref|NM_204195.1| Gallus gallus SRY (sex determining region Y)-box 3 (SOX3), mRNA
          Length = 1824

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 228 gtcctggtccgacccggaacccgc 251
           ||||||||||||||||| ||||||
Sbjct: 328 gtcctggtccgacccggcacccgc 305
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      catattatagatcaaatgaa 38
               ||||||||||||||||||||
Sbjct: 1226685 catattatagatcaaatgaa 1226704
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>emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BAC clone F2I11 (ESSA project)
          Length = 110992

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   gtcttcgtcttcttcgtctc 442
             ||||||||||||||||||||
Sbjct: 59634 gtcttcgtcttcttcgtctc 59615
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>emb|AL031262.2|SPBC30B4 S.pombe chromosome II cosmid c30B4
          Length = 25282

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 559 cgtcttcgtcttcttcgtct 540
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>gb|BT008743.1| Arabidopsis thaliana At5g11270 gene, complete cds
          Length = 1065

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 423 gtcttcgtcttcttcgtctc 442
           ||||||||||||||||||||
Sbjct: 204 gtcttcgtcttcttcgtctc 223
to top
>emb|AJ245811.1|RSO245811 Ralstonia solanacearum DNA for hrp gene locus
          Length = 23407

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 418   acggcgtcttcgtcttcttcgtct 441
             |||||||||||||| |||||||||
Sbjct: 11973 acggcgtcttcgtcctcttcgtct 11950
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>gb|AC021630.11| Mus musculus chromosome 14, clone RP23-178B24, complete sequence
          Length = 202804

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     tcaaatgaaataggaagatt 49
              ||||||||||||||||||||
Sbjct: 121245 tcaaatgaaataggaagatt 121226
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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      catattatagatcaaatgaa 38
               ||||||||||||||||||||
Sbjct: 1274542 catattatagatcaaatgaa 1274561
to top
>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete
              sequence
          Length = 146022

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 411    ttcgcggacggcgtcttcgtcttc 434
              ||||||| ||||||||||||||||
Sbjct: 142566 ttcgcggccggcgtcttcgtcttc 142589
to top
>gb|AC004680.3| Arabidopsis thaliana chromosome 2 clone F23F1 map m283, complete
             sequence
          Length = 88543

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 45263 cgtcttcgtcttcttcgtct 45244
to top
>gb|AC009036.7| Homo sapiens chromosome 16 clone RP11-142L23, complete sequence
          Length = 193790

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    ctagcaaagtaatgcaagat 115
             ||||||||||||||||||||
Sbjct: 43631 ctagcaaagtaatgcaagat 43650
to top
>gb|AY838859.1| Dorvillea erucaeformis 28S ribosomal RNA gene, partial sequence
          Length = 3575

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  gacccggaacccgccccggc 257
            ||||||||||||||||||||
Sbjct: 2418 gacccggaacccgccccggc 2399
to top
>gb|AC175205.2| Sporobolomyces roseus clone JGIBAIF-5L1, complete sequence
          Length = 36144

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 33435 cgtcttcgtcttcttcgtct 33416
to top
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      catattatagatcaaatgaa 38
               ||||||||||||||||||||
Sbjct: 1237798 catattatagatcaaatgaa 1237817
to top
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      catattatagatcaaatgaa 38
               ||||||||||||||||||||
Sbjct: 1134032 catattatagatcaaatgaa 1134051
to top
>gb|AC018501.9| Homo sapiens chromosome 3 clone RP11-283K15 map 3p, complete sequence
          Length = 202070

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 3    cacaagaaattacaaacata 22
            ||||||||||||||||||||
Sbjct: 8881 cacaagaaattacaaacata 8900
to top
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      catattatagatcaaatgaa 38
               ||||||||||||||||||||
Sbjct: 1213978 catattatagatcaaatgaa 1213997
to top
>ref|NM_001021435.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC3D6.14c),
           partial mRNA
          Length = 932

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 373 cgtcttcgtcttcttcgtct 392
to top
>gb|AC009063.8| Homo sapiens chromosome 16 clone RP11-298D21, complete sequence
          Length = 194237

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     ctagcaaagtaatgcaagat 115
              ||||||||||||||||||||
Sbjct: 161730 ctagcaaagtaatgcaagat 161749
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 411      ttcgcggacggcgtcttcgtcttc 434
                ||||||| ||||||||||||||||
Sbjct: 29033913 ttcgcggccggcgtcttcgtcttc 29033936
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 419     cggcgtcttcgtcttcttcg 438
               ||||||||||||||||||||
Sbjct: 2417882 cggcgtcttcgtcttcttcg 2417901
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 411      ttcgcggacggcgtcttcgtcttc 434
                ||||||| ||||||||||||||||
Sbjct: 31425841 ttcgcggccggcgtcttcgtcttc 31425864



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 131      gtgatgcttatattattatt 150
                ||||||||||||||||||||
Sbjct: 16115617 gtgatgcttatattattatt 16115636
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 411     ttcgcggacggcgtcttcgtcttc 434
               ||||||| ||||||||||||||||
Sbjct: 8631727 ttcgcggccggcgtcttcgtcttc 8631750
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 411      ttcgcggacggcgtcttcgtcttc 434
                ||||||| ||||||||||||||||
Sbjct: 41581446 ttcgcggccggcgtcttcgtcttc 41581469



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 411     ttcgcggacggcgtcttcgtcttc 434
               ||||||||||||| ||||||||||
Sbjct: 1371007 ttcgcggacggcgccttcgtcttc 1370984
to top
>gb|AC012320.6|AC012320 Homo sapiens chromosome 16 clone RP11-280N16, complete sequence
          Length = 189840

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     ctagcaaagtaatgcaagat 115
              ||||||||||||||||||||
Sbjct: 101888 ctagcaaagtaatgcaagat 101907
to top
>emb|BX831226.1|CNS09YSK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS6ZA11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1309

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 423 gtcttcgtcttcttcgtctc 442
           ||||||||||||||||||||
Sbjct: 202 gtcttcgtcttcttcgtctc 221
to top
>gb|AC037424.10|AC037424 Arabidopsis thaliana chromosome 1 BAC F19K6 genomic sequence, complete
             sequence
          Length = 75948

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 60608 cgtcttcgtcttcttcgtct 60627
to top
>gb|AF038543.1|AF038543 Rhodococcus sp. ATCC15963 DNA polymerase I (polA) gene, complete cds
          Length = 3027

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 422  cgtcttcgtcttcttcgtct 441
            ||||||||||||||||||||
Sbjct: 1911 cgtcttcgtcttcttcgtct 1892
to top
>gb|AC027138.10| Staphylococcus aureus clone sabac-9, complete sequence
          Length = 46239

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    catattatagatcaaatgaa 38
             ||||||||||||||||||||
Sbjct: 39392 catattatagatcaaatgaa 39411
to top
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0614D08
          Length = 147548

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 411    ttcgcggacggcgtcttcgtcttc 434
              ||||||| ||||||||||||||||
Sbjct: 137739 ttcgcggccggcgtcttcgtcttc 137762
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 422     cgtcttcgtcttcttcgtct 441
               ||||||||||||||||||||
Sbjct: 7483543 cgtcttcgtcttcttcgtct 7483524
to top
>gb|AC024619.16| Homo sapiens chromosome 17, clone RP11-321A17, complete sequence
          Length = 198666

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    agagggcagggctgggcccg 88
             ||||||||||||||||||||
Sbjct: 20501 agagggcagggctgggcccg 20482
to top
>gb|AC091050.3| Homo sapiens chromosome 8, clone RP11-242F4, complete sequence
          Length = 139980

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 52449 cgtcttcgtcttcttcgtct 52430
to top
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0060O17
          Length = 180015

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 411    ttcgcggacggcgtcttcgtcttc 434
              ||||||| ||||||||||||||||
Sbjct: 151450 ttcgcggccggcgtcttcgtcttc 151473
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      catattatagatcaaatgaa 38
               ||||||||||||||||||||
Sbjct: 1198012 catattatagatcaaatgaa 1198031
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 415     cggacggcgtcttcgtcttc 434
               ||||||||||||||||||||
Sbjct: 1800654 cggacggcgtcttcgtcttc 1800635
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>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0009N02
          Length = 121142

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 411    ttcgcggacggcgtcttcgtcttc 434
              ||||||| ||||||||||||||||
Sbjct: 101050 ttcgcggccggcgtcttcgtcttc 101073
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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      catattatagatcaaatgaa 38
               ||||||||||||||||||||
Sbjct: 1198213 catattatagatcaaatgaa 1198232
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 428     cgtcttcttcgtctcgcgct 447
               ||||||||||||||||||||
Sbjct: 3120260 cgtcttcttcgtctcgcgct 3120241
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>dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0463G12
          Length = 145403

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 411   ttcgcggacggcgtcttcgtcttc 434
             ||||||| ||||||||||||||||
Sbjct: 38774 ttcgcggccggcgtcttcgtcttc 38797
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 248     ccgccccggcaccggccccg 267
               ||||||||||||||||||||
Sbjct: 4869195 ccgccccggcaccggccccg 4869214
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>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0037C04
          Length = 137879

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 411   ttcgcggacggcgtcttcgtcttc 434
             ||||||||||||| ||||||||||
Sbjct: 69058 ttcgcggacggcgccttcgtcttc 69035
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>dbj|AK119998.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-H04, full
           insert sequence
          Length = 571

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 cggcgtcttcgtcttcttcg 438
           ||||||||||||||||||||
Sbjct: 196 cggcgtcttcgtcttcttcg 177
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>dbj|AK099659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066I05, full
           insert sequence
          Length = 3804

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 gtgatgcttatattattatt 150
           ||||||||||||||||||||
Sbjct: 120 gtgatgcttatattattatt 139
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 418     acggcgtcttcgtcttcttcgtct 441
               |||||||||||||| |||||||||
Sbjct: 1096189 acggcgtcttcgtcctcttcgtct 1096166
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>gb|BT002017.1| Arabidopsis thaliana putative protein (At5g11270) mRNA, complete
           cds
          Length = 1336

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 423 gtcttcgtcttcttcgtctc 442
           ||||||||||||||||||||
Sbjct: 211 gtcttcgtcttcttcgtctc 230
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 414     gcggacggcgtcttcgtcttcttc 437
               |||||||||||||||| |||||||
Sbjct: 1891955 gcggacggcgtcttcggcttcttc 1891978
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>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      catattatagatcaaatgaa 38
               ||||||||||||||||||||
Sbjct: 1240181 catattatagatcaaatgaa 1240200
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>dbj|AP006207.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-702B3, complete
              sequence
          Length = 170015

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 422    cgtcttcgtcttcttcgtct 441
              ||||||||||||||||||||
Sbjct: 152946 cgtcttcgtcttcttcgtct 152965
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 247     cccgccccggcaccggccccgtcc 270
               ||||| ||||||||||||||||||
Sbjct: 2921015 cccgcgccggcaccggccccgtcc 2921038
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>gb|AF048833.1|AF048833 Streptomyces peucetius polyketide cyclase (dpsY) and
            daunorubicin/doxorubicin biosynthesis enzyme (dnrX)
            genes, complete cds
          Length = 2221

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  cggacggcgtcttcgtcttc 434
            ||||||||||||||||||||
Sbjct: 1587 cggacggcgtcttcgtcttc 1606
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>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 182172

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 348  ccgccggtccgctgcctcct 367
            ||||||||||||||||||||
Sbjct: 6302 ccgccggtccgctgcctcct 6283
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>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 107819

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   ccgccggtccgctgcctcct 367
             ||||||||||||||||||||
Sbjct: 38183 ccgccggtccgctgcctcct 38202
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>emb|Z95620.1|SPBC3D6 S.pombe chromosome II cosmid c3D6
          Length = 32329

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 31957 cgtcttcgtcttcttcgtct 31938
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 415     cggacggcgtcttcgtcttc 434
               ||||||||||||||||||||
Sbjct: 1476395 cggacggcgtcttcgtcttc 1476376
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>emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on chromosome X, complete
              sequence
          Length = 201821

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    cgtcttcgtcttcttcgtct 441
              ||||||||||||||||||||
Sbjct: 119546 cgtcttcgtcttcttcgtct 119527
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>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      catattatagatcaaatgaa 38
               ||||||||||||||||||||
Sbjct: 1165809 catattatagatcaaatgaa 1165828
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>gb|AC090955.3| Homo sapiens chromosome 3 clone RP11-622A14 map 3p, complete sequence
          Length = 209168

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      cacaagaaattacaaacata 22
              ||||||||||||||||||||
Sbjct: 143861 cacaagaaattacaaacata 143880
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>gb|AC172750.1| Mus musculus BAC clone RP24-177J9 from chromosome 7, complete sequence
          Length = 145766

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    cgtcttcgtcttcttcgtct 441
              ||||||||||||||||||||
Sbjct: 103677 cgtcttcgtcttcttcgtct 103658



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    cgtcttcgtcttcttcgtct 441
              ||||||||||||||||||||
Sbjct: 103653 cgtcttcgtcttcttcgtct 103634
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>emb|AL136374.4| Human DNA sequence from clone RP1-244G5 on chromosome 1q24.3-25.3,
              complete sequence
          Length = 119853

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     ctagcaaagtaatgcaagat 115
              ||||||||||||||||||||
Sbjct: 109278 ctagcaaagtaatgcaagat 109259
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>emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on chromosome 11, complete
             sequence
          Length = 136540

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 69520 cgtcttcgtcttcttcgtct 69501
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>gb|AC167813.4| Mus musculus BAC clone RP24-233L18 from chromosome 7, complete sequence
          Length = 172485

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 42876 cgtcttcgtcttcttcgtct 42857



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 42852 cgtcttcgtcttcttcgtct 42833
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>gb|M26064.1|CHKATPCA Chicken Ca2+ ATPase, complete cds
          Length = 3189

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 375  cacgtccgcgccgtctccgtcgcc 398
            |||||| |||||||||||||||||
Sbjct: 1361 cacgtcagcgccgtctccgtcgcc 1338
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>dbj|AB011803.1| Gallus gallus mRNA for SOX3, complete cds
          Length = 1824

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 228 gtcctggtccgacccggaacccgc 251
           ||||||||||||||||| ||||||
Sbjct: 328 gtcctggtccgacccggcacccgc 305
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>dbj|AB027890.1| Schizosaccharomyces pombe gene for Hypothetical protein, partial
           cds, clone:TA46
          Length = 631

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 422 cgtcttcgtcttcttcgtct 441
           ||||||||||||||||||||
Sbjct: 161 cgtcttcgtcttcttcgtct 180
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>dbj|AB020860.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 3/11
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   cgtcttcgtcttcttcgtct 441
             ||||||||||||||||||||
Sbjct: 13772 cgtcttcgtcttcttcgtct 13791
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>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0044F08
          Length = 141528

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 411   ttcgcggacggcgtcttcgtcttc 434
             ||||||||||||| ||||||||||
Sbjct: 20628 ttcgcggacggcgccttcgtcttc 20605


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,866,207
Number of Sequences: 3902068
Number of extensions: 3866207
Number of successful extensions: 92746
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91224
Number of HSP's gapped (non-prelim): 1522
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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