ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart38a10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB029935.1| Triticum aestivum mRNA for chitinase 2, complete cds Length = 1163 Score = 103 bits (52), Expect = 3e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 230 atctcactgcaccgcgagcccgatgttgaacgacaattggttgtagcagtcgaggttatt 289 ||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 983 atctcactgtgccgcgagcccaacgttgaacgacaattggttgtagcagtcgaggttatt 924 Query: 290 cccgtagc 297 |||||||| Sbjct: 923 cccgtagc 916 Score = 89.7 bits (45), Expect = 5e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 119 aggtctggacatccatttatttggtcataaaatacttaccaagattatttatttgtgggt 178 |||||||| |||||||||||||||||||||| ||||| |||||||||||||||| || || Sbjct: 1085 aggtctggtcatccatttatttggtcataaagtacttcccaagattatttatttatgtgt 1026 Query: 179 gatca 183 ||||| Sbjct: 1025 gatca 1021
>gb|AC146189.3| Pan troglodytes BAC clone CH251-490L21 from Y, complete sequence Length = 180597 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Minus Query: 185 cacatccacacacgcacatgcat 207 ||||||||||||||||||||||| Sbjct: 119650 cacatccacacacgcacatgcat 119628
>gb|AC140850.20| Medicago truncatula clone mth2-11i23, complete sequence Length = 138846 Score = 46.1 bits (23), Expect = 0.063 Identities = 26/27 (96%) Strand = Plus / Minus Query: 180 atcatcacatccacacacgcacatgca 206 |||||||||||| |||||||||||||| Sbjct: 130057 atcatcacatccccacacgcacatgca 130031
>gb|L40336.1|RICCHITB Oryza sativa chitinase (Rcht2) gene, complete cds Length = 5595 Score = 46.1 bits (23), Expect = 0.063 Identities = 29/31 (93%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggttattcccgtagc 297 |||||||||||||||||||| ||||||||| Sbjct: 4846 tggttgtagcagtcgaggttgctcccgtagc 4816
>gb|L40338.1|RICRCH0 Oryza sativa (clone RCH08) chitinase (Rcht2) mRNA, 3' end of cds Length = 652 Score = 46.1 bits (23), Expect = 0.063 Identities = 29/31 (93%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggttattcccgtagc 297 |||||||||||||||||||| ||||||||| Sbjct: 509 tggttgtagcagtcgaggttgctcccgtagc 479
>dbj|BS000612.1| Pan troglodytes chromosome Y clone:PTBY-009O17, complete sequences Length = 80000 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Plus Query: 185 cacatccacacacgcacatgcat 207 ||||||||||||||||||||||| Sbjct: 64086 cacatccacacacgcacatgcat 64108
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 46.1 bits (23), Expect = 0.063 Identities = 23/23 (100%) Strand = Plus / Minus Query: 185 cacatccacacacgcacatgcat 207 ||||||||||||||||||||||| Sbjct: 23891747 cacatccacacacgcacatgcat 23891725
>gb|AF013580.1|AF013580 Oryza sativa clone RGCH8 chitinase gene, complete cds Length = 2730 Score = 46.1 bits (23), Expect = 0.063 Identities = 29/31 (93%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggttattcccgtagc 297 |||||||||||||||||||| ||||||||| Sbjct: 2296 tggttgtagcagtcgaggttgctcccgtagc 2266
>gb|AF001500.1|OSAF001500 Oryza sativa clone MIRCH1 chitinase mRNA, partial cds Length = 913 Score = 46.1 bits (23), Expect = 0.063 Identities = 29/31 (93%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggttattcccgtagc 297 |||||||||||||||||||| ||||||||| Sbjct: 756 tggttgtagcagtcgaggttgctcccgtagc 726
>gb|AC154093.1| Homo sapiens chromosome 13 clone fa0790, complete sequence Length = 37001 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 cacatccacacacgcacatgca 206 |||||||||||||||||||||| Sbjct: 36335 cacatccacacacgcacatgca 36356
>gb|AC124684.3| Mus musculus BAC clone RP24-375D13 from chromosome 1, complete sequence Length = 167927 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 186 acatccacacacgcacatgcat 207 |||||||||||||||||||||| Sbjct: 115354 acatccacacacgcacatgcat 115375
>emb|AL359649.8| Human DNA sequence from clone RP11-65D24 on chromosome 13 Contains 2 novel genes, complete sequence Length = 144792 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 cacatccacacacgcacatgca 206 |||||||||||||||||||||| Sbjct: 109684 cacatccacacacgcacatgca 109663
>gb|AC153149.4| Mus musculus BAC clone RP23-176O2 from chromosome 3, complete sequence Length = 206540 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 cacatccacacacgcacatgca 206 |||||||||||||||||||||| Sbjct: 146384 cacatccacacacgcacatgca 146405
>gb|AC084760.2| Gallus gallus clone WAG-65N20, complete sequence Length = 109569 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 tatttggtcataaaatacttac 157 |||||||||||||||||||||| Sbjct: 23660 tatttggtcataaaatacttac 23639
>gb|AC019306.10| Homo sapiens chromosome 18, clone RP11-326M20, complete sequence Length = 175840 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 185 cacatccacacacgcacatgcataaa 210 ||||| |||||||||||||||||||| Sbjct: 137699 cacatacacacacgcacatgcataaa 137724
>gb|AC153644.3| Mus musculus BAC clone RP24-531A1 from 1, complete sequence Length = 166988 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 186 acatccacacacgcacatgcat 207 |||||||||||||||||||||| Sbjct: 15411 acatccacacacgcacatgcat 15432
>emb|AL591393.10| Human DNA sequence from clone RP11-224J22 on chromosome 9 Contains a novel gene (FLJ33868) and 2 CpG islands, complete sequence Length = 174911 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Minus Query: 148 aaatacttaccaagattatttattt 172 |||||||||||||| |||||||||| Sbjct: 80594 aaatacttaccaagtttatttattt 80570
>emb|BX322565.11| Zebrafish DNA sequence from clone CH211-262K18 in linkage group 24, complete sequence Length = 158981 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Minus Query: 184 tcacatccacacacgcacatgcata 208 |||||| |||||||||||||||||| Sbjct: 125189 tcacatacacacacgcacatgcata 125165
>emb|BX294098.11| Zebrafish DNA sequence from clone CH211-254P12 in linkage group 24, complete sequence Length = 152545 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 tcacatccacacacgcacatgcata 208 |||||| |||||||||||||||||| Sbjct: 66156 tcacatacacacacgcacatgcata 66180
>emb|BX294095.13| Zebrafish DNA sequence from clone CH211-248L17 in linkage group 24, complete sequence Length = 147604 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Minus Query: 184 tcacatccacacacgcacatgcata 208 |||||| |||||||||||||||||| Sbjct: 105496 tcacatacacacacgcacatgcata 105472
>ref|NM_197598.1| Oryza sativa (japonica cultivar-group) putative chitinase (OSJNBb0015I11.16), mRNA Length = 891 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 863 tggttgtagcagtcgaggtt 844
>ref|NM_197596.1| Oryza sativa (japonica cultivar-group) chitinase (OSJNBb0015I11.14), mRNA Length = 924 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 767 tggttgtagcagtcgaggtt 748
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 87376 tggttgtagcagtcgaggtt 87357
>gb|AC166486.5| Mus musculus chromosome 1, clone RP23-187M9, complete sequence Length = 187098 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ccatttatttggtcataaaa 150 |||||||||||||||||||| Sbjct: 13104 ccatttatttggtcataaaa 13085
>gb|AC131725.2| Mus musculus BAC clone RP23-129H16 from chromosome 5, complete sequence Length = 203437 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 cacatccacacacgcacatgcata 208 ||||| |||||||||||||||||| Sbjct: 10245 cacatacacacacgcacatgcata 10268
>gb|AC124374.5| Mus musculus BAC clone RP24-567K8 from chromosome 5, complete sequence Length = 181395 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cacatccacacacgcacatgcata 208 ||||| |||||||||||||||||| Sbjct: 177006 cacatacacacacgcacatgcata 176983
>gb|AC069288.7| Homo sapiens BAC clone RP11-416J17 from 7, complete sequence Length = 145709 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 cacatccacacacgcacatg 204 |||||||||||||||||||| Sbjct: 136461 cacatccacacacgcacatg 136480
>emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 in linkage group 7, complete sequence Length = 208436 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 aatatgtttataataaaagg 49 |||||||||||||||||||| Sbjct: 125720 aatatgtttataataaaagg 125739
>emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in linkage group 7, complete sequence Length = 196531 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 aatatgtttataataaaagg 49 |||||||||||||||||||| Sbjct: 145929 aatatgtttataataaaagg 145948
>gb|AC121591.4| Mus musculus BAC clone RP23-289H3 from 1, complete sequence Length = 195393 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 ccatttatttggtcataaaa 150 |||||||||||||||||||| Sbjct: 12989 ccatttatttggtcataaaa 13008
>emb|CR933541.6| Mouse DNA sequence from clone DN-97M20 on chromosome 11, complete sequence Length = 176646 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cacatccacacacgcacatgcata 208 ||||| |||||||||||||||||| Sbjct: 66957 cacatgcacacacgcacatgcata 66934
>gb|AC158914.4| Mus musculus chromosome 5, clone RP24-249F11, complete sequence Length = 155216 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 cacatccacacacgcacatgcata 208 ||||| |||||||||||||||||| Sbjct: 147813 cacatacacacacgcacatgcata 147836
>emb|AL592044.4| Human DNA sequence from clone RP13-407F1 on chromosome 13, complete sequence Length = 236130 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ccaagattatttatttgtgg 176 |||||||||||||||||||| Sbjct: 200200 ccaagattatttatttgtgg 200219
>emb|X56787.1|OSLMRNAC O.sativa L. mRNA for endochitinase Length = 1186 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 986 tggttgtagcagtcgaggtt 967
>gb|AY747625.1| Brassica rapa oleosin-like protein mRNA, partial cds Length = 813 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 atgtttataataaaaggggg 52 |||||||||||||||||||| Sbjct: 624 atgtttataataaaaggggg 643
>emb|AL596185.12| Mouse DNA sequence from clone RP23-172M21 on chromosome 11 Contains the 5' end of the Centb1 gene for centaurin beta 1, the gene for a novel protein similar to protein phosphatase 1 regulatory (inhibitor) subunit 2 Ppp1r2, a novel gene, the Gps2 gene for G protein pathway suppressor 2, the Eif5a gene for eukaryotic translation initiation factor 5A, the Ybx2 gene for Y box protein 2, the Slc2a4 gene for solute carrier family 2 (facilitated glucose transporter) member 4, a non-muscle cofilin 1 (Cfl1) pseudogene, the Cldn7 gene for claudin 7, the Rai12 gene for retinoic acid induced 12, the Dullard gene for Dullard homolog (Xenopus laevis) (novel NLI interacting factor-like phosphatase), the gene for novel PHD-finger protein JUNE1, the Dvl2 gene for dishevelled 2 dsh homolog (Drosophila), the Acadvl gene for acyl-Coenzyme A dehydrogenase very long chain, the Dlgh4 gene for discs large homolog 4 (Drosophila), the Asgr1 and Asgr2 genes for asialoglycoprotein receptor 1 and 2, a ribosomal protein L26 (Rpl26) pseudogene, the 5' end of the Mgl2 gene for macrophage galactose N-acetyl-galactosamine specific lectin 2 and nine CpG islands, complete sequence Length = 248203 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cacatccacacacgcacatgcata 208 ||||| |||||||||||||||||| Sbjct: 74107 cacatgcacacacgcacatgcata 74084
>emb|AL591420.5| Zebrafish DNA sequence from clone BUSM1-221H6 in linkage group 7 Contains three genes for novel immune-type receptors (nitr), complete sequence Length = 51019 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aatatgtttataataaaagg 49 |||||||||||||||||||| Sbjct: 25542 aatatgtttataataaaagg 25523
>emb|AL645902.6| Mouse DNA sequence from clone RP23-19I2 on chromosome 11 Contains the gene for the likely ortholog of H. sapiens phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) (PFAS), the gene for a novel protein (1500010J02Rik), the Aurkb gene for aurora kinase B, two genes for novel proteins (2310047M10Rik and 1110004B13Rik), a guanine nucleotide binding protein (G protein) gamma 5 subunit (Gng5) pseudogene and three CpG islands, complete sequence Length = 100678 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tttataataaaagggggcga 55 |||||||||||||||||||| Sbjct: 84763 tttataataaaagggggcga 84782
>gb|AC018352.23| Homo sapiens 3 BAC RP11-124O2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153352 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cacacacgcacatgcataaa 210 |||||||||||||||||||| Sbjct: 140880 cacacacgcacatgcataaa 140899
>gb|AC013701.6| Homo sapiens, clone RP11-22C8, complete sequence Length = 160275 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cacatccacacacgcacatgcata 208 ||||| |||||||||||||||||| Sbjct: 85595 cacatgcacacacgcacatgcata 85572
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 104334 tggttgtagcagtcgaggtt 104315 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 89608 tggttgtagcagtcgaggtt 89589
>gb|S37032.1| oleosin napII [rapeseeds, mRNA, 810 nt] Length = 810 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 atgtttataataaaaggggg 52 |||||||||||||||||||| Sbjct: 614 atgtttataataaaaggggg 633
>gb|DQ328612.1| Brassica napus oleosin-like protein gene, complete cds Length = 2105 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 atgtttataataaaaggggg 52 |||||||||||||||||||| Sbjct: 1765 atgtttataataaaaggggg 1784
>gb|AC161378.2| Mus musculus BAC clone RP23-202A6 from chromosome 16, complete sequence Length = 219298 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 180 atcatcacatccacacacgcacatgcat 207 |||| ||||| ||||||||||||||||| Sbjct: 192642 atcaacacatacacacacgcacatgcat 192615
>gb|AC154429.4| Mus musculus BAC clone RP24-202G18 from chromosome 16, complete sequence Length = 170875 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 180 atcatcacatccacacacgcacatgcat 207 |||| ||||| ||||||||||||||||| Sbjct: 147179 atcaacacatacacacacgcacatgcat 147152
>gb|DQ350639.1| Ajellomyces capsulatus ABC transporter-like protein (ABC1) gene, partial sequence Length = 2499 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cggctctgcataaacgagaa 31 |||||||||||||||||||| Sbjct: 308 cggctctgcataaacgagaa 289
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 20702882 tggttgtagcagtcgaggtt 20702863 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 20688156 tggttgtagcagtcgaggtt 20688137
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 19283301 tggttgtagcagtcgaggtt 19283282
>gb|AY973230.1| Triticum aestivum cultivar Sumai 3 class II chitinase gene, complete cds Length = 811 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 785 tggttgtagcagtcgaggtt 766
>gb|AY973229.1| Triticum aestivum cultivar Gamenya class II chitinase gene, complete cds Length = 891 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 785 tggttgtagcagtcgaggtt 766
>emb|BX649239.1| Sminthopsis DNA sequence from clone RZPD668-232B10, complete sequence Length = 40274 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 cacatccacacacgcacatgcata 208 ||||| |||||||||||||||||| Sbjct: 25008 cacatacacacacgcacatgcata 24985
>emb|X58000.1|BNOLEOSIN B.napus mRNA for major oleosin, nap-II Length = 810 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 atgtttataataaaaggggg 52 |||||||||||||||||||| Sbjct: 614 atgtttataataaaaggggg 633
>dbj|AK108949.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-C03, full insert sequence Length = 979 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 651 tggttgtagcagtcgaggtt 632
>dbj|AK070067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042L15, full insert sequence Length = 1073 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 793 tggttgtagcagtcgaggtt 774
>emb|AL954849.14| Zebrafish DNA sequence from clone DKEY-7N10 in linkage group 7, complete sequence Length = 162939 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 aatatgtttataataaaagg 49 |||||||||||||||||||| Sbjct: 25634 aatatgtttataataaaagg 25615
>gb|AC124225.13| Mus musculus chromosome 16, clone RP23-83P23, complete sequence Length = 157891 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 180 atcatcacatccacacacgcacatgcat 207 |||| ||||| ||||||||||||||||| Sbjct: 147018 atcaacacatacacacacgcacatgcat 147045
>dbj|D16222.1|RICCHT2 Oryza sativa (japonica cultivar-group) Cht-2 gene for endochitinase, complete cds Length = 2986 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 2421 tggttgtagcagtcgaggtt 2402
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 20714154 tggttgtagcagtcgaggtt 20714135 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 20699428 tggttgtagcagtcgaggtt 20699409
>emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on chromosome X, complete sequence Length = 201821 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 tcacatccacacacgcacatgcataaac 211 |||||| ||||||| ||||||||||||| Sbjct: 108892 tcacatgcacacacacacatgcataaac 108865
>emb|AL671885.13| Mouse DNA sequence from clone RP23-132C19 on chromosome X, complete sequence Length = 154019 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 aggacccaatcttatgatctcact 237 |||||||| ||||||||||||||| Sbjct: 84820 aggacccactcttatgatctcact 84843
>emb|AL663064.12| Mouse DNA sequence from clone RP23-12F1 on chromosome X, complete sequence Length = 220522 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 agattatttatttgtgggtg 179 |||||||||||||||||||| Sbjct: 154398 agattatttatttgtgggtg 154417
>gb|L34211.1|BLYCHI33A Hordeum vulgare chitinase (CHI33) gene, complete cds Length = 1779 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 1634 tggttgtagcagtcgaggtt 1615
>gb|AC133010.2| Homo sapiens chromosome 3 clone RP13-597L11, complete sequence Length = 165036 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cacacacgcacatgcataaa 210 |||||||||||||||||||| Sbjct: 129690 cacacacgcacatgcataaa 129671
>gb|U02286.1|OSU02286 Oryza sativa IR58 chitinase mRNA, complete cds Length = 1051 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 975 tggttgtagcagtcgaggtt 956
>dbj|AB016497.1| Oryza sativa mRNA for chitinase, complete cds Length = 923 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tggttgtagcagtcgaggtt 286 |||||||||||||||||||| Sbjct: 773 tggttgtagcagtcgaggtt 754 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,131,541 Number of Sequences: 3902068 Number of extensions: 3131541 Number of successful extensions: 66862 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66680 Number of HSP's gapped (non-prelim): 182 length of query: 297 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 275 effective length of database: 17,147,199,772 effective search space: 4715479937300 effective search space used: 4715479937300 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
