>gb|AC169509.1| Mus musculus BAC clone RP23-137L8 from chromosome 16, complete sequence
          Length = 206061

 Score = 46.1 bits (23), Expect = 0.056
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 32     caggctacagacatgctgtagtacaca 58
              ||||| |||||||||||||||||||||
Sbjct: 156433 caggcaacagacatgctgtagtacaca 156407

>gb|AC148408.2| X. tropicalis BAC clone ISB1-15D4 containing sox17 alpha and beta
             genes, complete sequence
          Length = 97631

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 169   ttattatagtgcagaaactaaataa 193
             ||||||||||||||||| |||||||
Sbjct: 26746 ttattatagtgcagaaaataaataa 26770

>emb|AL031407.3|HS436K10 Human DNA sequence from clone RP3-436K10 on chromosome 6p22.1-23,
             complete sequence
          Length = 165139

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 215   attctgcatgcctaccatgtg 235
             |||||||||||||||||||||
Sbjct: 33645 attctgcatgcctaccatgtg 33665

>emb|CR457443.5| Zebrafish DNA sequence from clone CH211-202J20 in linkage group 15,
              complete sequence
          Length = 146746

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 184    aactaaataagcctgatatgacaac 208
              ||||||| |||||||||||||||||
Sbjct: 128730 aactaaagaagcctgatatgacaac 128706

>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 43      catgctgtagtacacaaggaa 63
               |||||||||||||||||||||
Sbjct: 1742530 catgctgtagtacacaaggaa 1742510

>gb|AC154562.2| Mus musculus BAC clone RP23-400N5 from chromosome 14, complete sequence
          Length = 180365

 Score = 42.1 bits (21), Expect = 0.87
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 158    ttttacaaagtttattatagt 178
              |||||||||||||||||||||
Sbjct: 167926 ttttacaaagtttattatagt 167946

>gb|AC131083.8| Mus musculus chromosome 1, clone RP23-444L13, complete sequence
          Length = 182591

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    ctttattctgcatgcctacc 230
              ||||||||||||||||||||
Sbjct: 118640 ctttattctgcatgcctacc 118621

>gb|AC104613.2| Drosophila melanogaster clone BACR06K07, complete sequence
          Length = 152934

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    acaagtgagcagcaaaaatg 149
              ||||||||||||||||||||
Sbjct: 118845 acaagtgagcagcaaaaatg 118864

>emb|AL449264.18| Human DNA sequence from clone RP11-485H8 on chromosome 1 Contains the
             5' end of the CASQ2 gene for calsequestrin 2 (cardiac
             muscle), the NHLH2 gene for nescient helix loop helix 2, a
             heterogeneous nuclear ribonucleoprotein A1 (HNRPA1)
             pseudogene and two CpG islands, complete sequence
          Length = 164655

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    tccaggacaaagtagcccta 107
             ||||||||||||||||||||
Sbjct: 39573 tccaggacaaagtagcccta 39554

>emb|AL049596.15|HSJ300A12 Human DNA sequence from clone RP1-300A12 on chromosome 1q24.1-24.3
             Contains STSs and GSSs, complete sequence
          Length = 56854

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   atatgacaaccactttattc 218
             ||||||||||||||||||||
Sbjct: 32159 atatgacaaccactttattc 32140

>gb|AC008514.8| Homo sapiens chromosome 5 clone CTC-455F18, complete sequence
          Length = 172525

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 144   aaaatggcagagcgttttacaaag 167
             |||||||||||| |||||||||||
Sbjct: 87705 aaaatggcagagtgttttacaaag 87728

>gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, complete sequence
          Length = 198167

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 158   ttttacaaagtttattatagtgcagaaa 185
             |||||| |||||||| ||||||||||||
Sbjct: 63355 ttttactaagtttatgatagtgcagaaa 63328

>gb|AE003608.5| Drosophila melanogaster chromosome 2L, section 17 of 83 of the complete
              sequence
          Length = 174887

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    acaagtgagcagcaaaaatg 149
              ||||||||||||||||||||
Sbjct: 172454 acaagtgagcagcaaaaatg 172435

>gb|AC005750.1|AC005750 Drosophila melanogaster DNA sequence (P1s DS03979 (D283) and DS01272
             (D284)), complete sequence
          Length = 102516

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   acaagtgagcagcaaaaatg 149
             ||||||||||||||||||||
Sbjct: 66646 acaagtgagcagcaaaaatg 66665


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,240,765
Number of Sequences: 3902068
Number of extensions: 2240765
Number of successful extensions: 38467
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38448
Number of HSP's gapped (non-prelim): 19
length of query: 266
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 244
effective length of database: 17,147,199,772
effective search space: 4183916744368
effective search space used: 4183916744368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)