ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart38a06 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 152 bits (384), Expect = 3e-37 Identities = 73/73 (100%), Positives = 73/73 (100%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA Sbjct: 790 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 849 Query: 255 GLTAKGIPNSISI 217 GLTAKGIPNSISI Sbjct: 850 GLTAKGIPNSISI 862
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 125 bits (314), Expect = 4e-29 Identities = 61/73 (83%), Positives = 65/73 (89%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WTSD +ALE F+RFSDRLVEIE KVVGMN D LKNRNGPA+FPYMLLYPNTSD GAAA Sbjct: 794 WTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAA 853 Query: 255 GLTAKGIPNSISI 217 G+TAKGIPNSISI Sbjct: 854 GITAKGIPNSISI 866
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 119 bits (299), Expect = 2e-27 Identities = 57/73 (78%), Positives = 64/73 (87%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WTSDPKALE FKRFS +LVEIESKV+ MN DP LKNR GPA FPY L++PNTSD+KGAA Sbjct: 791 WTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAE 850 Query: 255 GLTAKGIPNSISI 217 G+TA+GIPNSISI Sbjct: 851 GITARGIPNSISI 863
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 112 bits (279), Expect = 5e-25 Identities = 55/73 (75%), Positives = 58/73 (79%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WTSD KALE FKRF RL EIES+VV MN DP KNR GP FPY LLYPNTSD KG AA Sbjct: 798 WTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAA 857 Query: 255 GLTAKGIPNSISI 217 GL+A+GIPNSISI Sbjct: 858 GLSARGIPNSISI 870
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 99.8 bits (247), Expect = 3e-21 Identities = 50/74 (67%), Positives = 56/74 (75%), Gaps = 1/74 (1%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSD-HKGAA 259 WTSD KAL+ FKRF RLV+IE+++ MN + LKNRNGP K PYMLLYPNTSD K Sbjct: 804 WTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKG 863 Query: 258 AGLTAKGIPNSISI 217 GLTA GIPNSISI Sbjct: 864 QGLTAMGIPNSISI 877
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 83.2 bits (204), Expect = 3e-16 Identities = 39/73 (53%), Positives = 53/73 (72%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WTSD +ALE FK+F ++L EIE K+ N+D +L+NR+GP + PY LLYP++ + Sbjct: 795 WTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSKE------ 848 Query: 255 GLTAKGIPNSISI 217 GLT +GIPNSISI Sbjct: 849 GLTFRGIPNSISI 861
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 82.4 bits (202), Expect = 4e-16 Identities = 40/73 (54%), Positives = 49/73 (67%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WT++ KAL+ FKRF +L EIE K++G N D L+NRNGP K PY +L P D Sbjct: 795 WTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCEDE----- 849 Query: 255 GLTAKGIPNSISI 217 GLT +GIPNSISI Sbjct: 850 GLTFRGIPNSISI 862
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 80.9 bits (198), Expect = 1e-15 Identities = 40/73 (54%), Positives = 47/73 (64%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WT+D KALE FKRF +L IE K+ N DP L+NR GP + PY LL H+ + Sbjct: 798 WTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLL------HRSSEE 851 Query: 255 GLTAKGIPNSISI 217 GLT KGIPNSISI Sbjct: 852 GLTFKGIPNSISI 864
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 80.9 bits (198), Expect = 1e-15 Identities = 41/73 (56%), Positives = 49/73 (67%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WTSD LE FKRF +L EIE K++ N D L+NR GPAK PY LLYP++ + Sbjct: 787 WTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSEE------ 840 Query: 255 GLTAKGIPNSISI 217 GLT +GIPNSISI Sbjct: 841 GLTFRGIPNSISI 853
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 78.6 bits (192), Expect = 6e-15 Identities = 37/73 (50%), Positives = 52/73 (71%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WTSD KAL+ F++F ++L EIE+K+ N+DP L +R GP + PY LL+P++ + Sbjct: 798 WTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSKE------ 851 Query: 255 GLTAKGIPNSISI 217 GLT +GIPNSISI Sbjct: 852 GLTFRGIPNSISI 864
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 78.6 bits (192), Expect = 6e-15 Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 1/74 (1%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELK-NRNGPAKFPYMLLYPNTSDHKGAA 259 WTSD KAL+ F++F ++L EIE K+V N+DP L+ NR GP + PY LLYP++ + Sbjct: 772 WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEE----- 826 Query: 258 AGLTAKGIPNSISI 217 GLT +GIPNSISI Sbjct: 827 -GLTFRGIPNSISI 839
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 78.2 bits (191), Expect = 8e-15 Identities = 38/73 (52%), Positives = 52/73 (71%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WTSD +ALE FKRF ++L +IE+K+ N+D +L+NR GP + PY LL P++ + Sbjct: 791 WTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKE------ 844 Query: 255 GLTAKGIPNSISI 217 GLT +GIPNSISI Sbjct: 845 GLTFRGIPNSISI 857
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 77.8 bits (190), Expect = 1e-14 Identities = 38/73 (52%), Positives = 49/73 (67%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WTSD KAL+ F++F ++L EIE K+ N+D L NR GP + PY LL+PN+ Sbjct: 800 WTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSE------- 852 Query: 255 GLTAKGIPNSISI 217 GLT +GIPNSISI Sbjct: 853 GLTCRGIPNSISI 865
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 77.4 bits (189), Expect = 1e-14 Identities = 38/73 (52%), Positives = 47/73 (64%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WT+D E FKRF +L EIE K+ N+D L+NR GP K PY LLYP++ + Sbjct: 800 WTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSEE------ 853 Query: 255 GLTAKGIPNSISI 217 GLT +GIPNSISI Sbjct: 854 GLTCRGIPNSISI 866
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 72.4 bits (176), Expect = 4e-13 Identities = 36/67 (53%), Positives = 44/67 (65%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WTSD LE FKRF +L EIE K+V N+D L+NR GPAK PY LLYP++ + Sbjct: 681 WTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPSSEE------ 734 Query: 255 GLTAKGI 235 GLT +GI Sbjct: 735 GLTFRGI 741
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 68.2 bits (165), Expect = 8e-12 Identities = 33/73 (45%), Positives = 45/73 (61%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WT D + L F+RF L +IE++++ MN KNR+GP PY LL+P + + Sbjct: 793 WTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSEE------ 846 Query: 255 GLTAKGIPNSISI 217 GLT KGIPNS+SI Sbjct: 847 GLTGKGIPNSVSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 67.8 bits (164), Expect = 1e-11 Identities = 33/73 (45%), Positives = 43/73 (58%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WT D + L F RF +L +IE +++ N D L NR+GP PY LL+P + Sbjct: 795 WTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSE------G 848 Query: 255 GLTAKGIPNSISI 217 GLT KGIPNS+SI Sbjct: 849 GLTGKGIPNSVSI 861
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 66.6 bits (161), Expect = 2e-11 Identities = 31/73 (42%), Positives = 46/73 (63%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 W ++ +ALE F++F +++ EIE + N D LKNR G K PY LL+P++ Sbjct: 793 WAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSE------G 846 Query: 255 GLTAKGIPNSISI 217 G+T +GIPNS+SI Sbjct: 847 GVTGRGIPNSVSI 859
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 66.2 bits (160), Expect = 3e-11 Identities = 32/73 (43%), Positives = 44/73 (60%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WT D + L F+RF ++L +IE +++ N + L NR GP PY LL+P + Sbjct: 794 WTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSE------G 847 Query: 255 GLTAKGIPNSISI 217 GLT KGIPNS+SI Sbjct: 848 GLTGKGIPNSVSI 860
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 56.2 bits (134), Expect = 3e-08 Identities = 31/73 (42%), Positives = 41/73 (56%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 W ++P F++FS RL E E + N++PE KNR G PY LL P + Sbjct: 830 WLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSE------P 883 Query: 255 GLTAKGIPNSISI 217 G+T +GIPNSISI Sbjct: 884 GVTGRGIPNSISI 896
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 54.3 bits (129), Expect = 1e-07 Identities = 31/73 (42%), Positives = 38/73 (52%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 W SD + F+ RL EIE + G N D +LKNR G PY L+ P + A Sbjct: 875 WNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD------A 928 Query: 255 GLTAKGIPNSISI 217 G+T GIPNS SI Sbjct: 929 GVTGMGIPNSTSI 941
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 53.1 bits (126), Expect = 3e-07 Identities = 30/73 (41%), Positives = 38/73 (52%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 W SD + F+ RL EIE + G N D +LKNR G PY L+ P + + Sbjct: 858 WNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD------S 911 Query: 255 GLTAKGIPNSISI 217 G+T GIPNS SI Sbjct: 912 GVTGMGIPNSTSI 924
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 52.4 bits (124), Expect = 5e-07 Identities = 25/73 (34%), Positives = 40/73 (54%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WT+DP AL + F+ + E ++ N DP +NR G PY L+ P+ + Sbjct: 833 WTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPS------SGP 886 Query: 255 GLTAKGIPNSISI 217 G+T +G+PNS++I Sbjct: 887 GITCRGVPNSVTI 899
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 48.9 bits (115), Expect = 5e-06 Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGA-- 262 WT D + F+ F + +I +V N+DP+ KNR+G PY+LL P+ D Sbjct: 860 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDP 919 Query: 261 --AAGLTAKGIPNSISI 217 + GIPNSISI Sbjct: 920 TDEKMVMEMGIPNSISI 936
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 44.7 bits (104), Expect = 1e-04 Identities = 28/73 (38%), Positives = 38/73 (52%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 W ++P F+RF +L +E + N + LKNR G Y LL P TS+H Sbjct: 830 WANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKP-TSEH----- 883 Query: 255 GLTAKGIPNSISI 217 G+T G+P SISI Sbjct: 884 GVTGMGVPYSISI 896
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 44.3 bits (103), Expect = 1e-04 Identities = 26/73 (35%), Positives = 36/73 (49%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 WT+D A+ F+ + E + N D KNR G PY LL P+ + Sbjct: 852 WTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPS------SPP 905 Query: 255 GLTAKGIPNSISI 217 G+T +G+PNSISI Sbjct: 906 GVTCRGVPNSISI 918
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 43.1 bits (100), Expect = 3e-04 Identities = 25/73 (34%), Positives = 37/73 (50%) Frame = -2 Query: 435 WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAA 256 W D + + F+ F ++ +I +V N D +NR+G PY+LL P + A Sbjct: 861 WQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKT 920 Query: 255 GLTAKGIPNSISI 217 + GIPNSISI Sbjct: 921 -VMEMGIPNSISI 932
>COL19_CAEEL (P18835) Cuticle collagen 19 precursor| Length = 289 Score = 36.6 bits (83), Expect = 0.027 Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = -1 Query: 427 GPKGPGGVQAVQRPAGGDREQG-GGHEP*PGAQEPQRTG*VSLHAALPQHLRPQGRRCRA 251 GPKGP G+ PAGG+ +G G PG Q PQ A P P+G Sbjct: 150 GPKGPSGLPGSAGPAGGNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRGEPGTE 209 Query: 250 YRQGHP 233 Y+ G P Sbjct: 210 YKPGQP 215
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 32.0 bits (71), Expect = 0.67 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 13/78 (16%) Frame = -1 Query: 427 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRTG*V-------SLHAALPQHLRPQ 269 GP G G+ PAGG +Q GG++ Q R SL++ + L P+ Sbjct: 1084 GPPGSPGLPGPAGPAGGGYDQSGGYDEYRADQPSFRAKDYEVDATIKSLNSQIENLLTPE 1143 Query: 268 G------RRCRAYRQGHP 233 G R CR R HP Sbjct: 1144 GSKKNPARTCRDIRLSHP 1161
>HYDL_STRCO (P42534) Putative polyketide hydroxylase (EC 1.14.13.-) (WhiE ORF| VIII) Length = 627 Score = 31.2 bits (69), Expect = 1.1 Identities = 16/36 (44%), Positives = 16/36 (44%) Frame = -1 Query: 427 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQR 320 GP GPGG P G GGG PG PQR Sbjct: 435 GPGGPGGPGGPDGPRGAGGAPGGGPGGGPGGGGPQR 470
>PRPP_HUMAN (P81489) Salivary proline-rich protein II-1 (Fragment)| Length = 174 Score = 30.0 bits (66), Expect = 2.5 Identities = 19/67 (28%), Positives = 28/67 (41%) Frame = -1 Query: 427 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRTG*VSLHAALPQHLRPQGRRCRAY 248 GP P G + P GG++ QG P +EP G P +P+GR + Sbjct: 53 GPPPPPGKPEGRPPQGGNQSQGPPPHPPGKPEEPPPQGGNQSQGTPPPPGKPEGRPPQQG 112 Query: 247 RQGHPQQ 227 G P++ Sbjct: 113 GPGKPER 119
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 29.6 bits (65), Expect = 3.3 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -1 Query: 427 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRTG 314 GP+ GG RP GG R QGG + GA +R G Sbjct: 274 GPRPQGG----PRPQGGSRPQGGSAQGAQGAPSQERQG 307
>SPD2_NEPCL (P46804) Spidroin 2 (Dragline silk fibroin 2) (Fragment)| Length = 627 Score = 29.3 bits (64), Expect = 4.3 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 9/63 (14%) Frame = -1 Query: 427 GPKGPGGVQAVQRPAGGDREQG-GGHEP--------*PGAQEPQRTG*VSLHAALPQHLR 275 GP GPG A A G +QG GG+ P PG Q P G + AA Sbjct: 157 GPSGPGSAAAAAAAASGPGQQGPGGYGPGQQGPGGYGPGQQGPSGPGSAAAAAAAASGPG 216 Query: 274 PQG 266 QG Sbjct: 217 QQG 219 Score = 28.5 bits (62), Expect = 7.4 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Frame = -1 Query: 427 GPKGPGGVQAVQRPAGGDREQG-GGHEP---*PGAQEPQRTG 314 GP GPG A A G +QG GG+ P PG P + G Sbjct: 198 GPSGPGSAAAAAAAASGPGQQGPGGYGPGQQGPGGYGPGQQG 239
>RS5_GLOVI (Q7NEG9) 30S ribosomal protein S5| Length = 223 Score = 29.3 bits (64), Expect = 4.3 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = -1 Query: 427 GPKGPGGVQAVQRPAGGDREQGG 359 GP GPGG Q P DRE GG Sbjct: 17 GPGGPGGPGPEQAPEDPDRESGG 39
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 29.3 bits (64), Expect = 4.3 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -1 Query: 430 LGPKGPGGVQAVQRPAGGDREQGGGHEP 347 +GP GP G + +Q P G ++G EP Sbjct: 1028 MGPSGPAGARGIQGPQGPRGDKGEAGEP 1055
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 28.9 bits (63), Expect = 5.7 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -1 Query: 430 LGPKGPGGVQAVQRPAGGDREQGGGH 353 LGP+GP G Q +Q P G QG H Sbjct: 729 LGPQGPPGTQGMQGPPGPRGMQGPPH 754
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 28.9 bits (63), Expect = 5.7 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 14/80 (17%) Frame = -1 Query: 427 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQR--------TG*VSLHAALPQHLRP 272 GP GP G P+GG + G G E A +P+R SL+ + L P Sbjct: 1081 GPPGPPGPPGHAGPSGGGYDGGDGGEY-YRADQPERKPKDYEVDATLKSLNQQIEVILTP 1139 Query: 271 QG------RRCRAYRQGHPQ 230 +G R CR R HP+ Sbjct: 1140 EGSRKNPARTCRDLRLSHPE 1159
>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 28.5 bits (62), Expect = 7.4 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = -1 Query: 433 DLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEP 326 D GPKGP G +Q P G E+G G PG + P Sbjct: 224 DRGPKGPPGPPGLQGPKG---EKGFGMPGLPGLKGP 256
>CAD16_MOUSE (O88338) Cadherin-16 precursor (Kidney-specific cadherin)| (Ksp-cadherin) Length = 830 Score = 28.5 bits (62), Expect = 7.4 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 Query: 363 VVGMNHDPELKNRNGPAKF 307 V G++ DP+L NRNGP F Sbjct: 688 VSGVSEDPDLANRNGPYSF 706
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 28.5 bits (62), Expect = 7.4 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Frame = -1 Query: 433 DLGPKGPGGVQAVQRPAG--GDREQGG--GHEP*PGAQEPQ 323 D+GP+GP GVQ PAG G R + G G PG P+ Sbjct: 587 DVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPK 627
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = -1 Query: 433 DLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQE 329 D G GP G +Q P G GG EP P Q+ Sbjct: 1140 DKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQ 1174
>DHSA_SALTY (Q8ZQU3) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 588 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -1 Query: 394 QRPAGGDREQGGGHEP*PGAQEPQRTG*VSLHAALPQHLR 275 QRP GG + GG + A RTG LH Q+L+ Sbjct: 116 QRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLK 155
>DHSA_ECOLI (P0AC41) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 588 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -1 Query: 394 QRPAGGDREQGGGHEP*PGAQEPQRTG*VSLHAALPQHLR 275 QRP GG + GG + A RTG LH Q+L+ Sbjct: 116 QRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLK 155
>DHSA_ECOL6 (P0AC42) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 588 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -1 Query: 394 QRPAGGDREQGGGHEP*PGAQEPQRTG*VSLHAALPQHLR 275 QRP GG + GG + A RTG LH Q+L+ Sbjct: 116 QRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLK 155
>DHSA_ECO57 (P0AC43) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 588 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -1 Query: 394 QRPAGGDREQGGGHEP*PGAQEPQRTG*VSLHAALPQHLR 275 QRP GG + GG + A RTG LH Q+L+ Sbjct: 116 QRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLK 155
>Y2172_STRP8 (P60362) UPF0297 protein spyM18_2172| Length = 89 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +2 Query: 155 RQVSYVANALYSSMVADGLN*MEMLLGMPLAVSPAAAPLWSE 280 RQ+S A+Y S+ G N + ++G L+ PA P +++ Sbjct: 18 RQISETLTAVYHSLDEKGYNPINQIVGYVLSGDPAYVPRYND 59
>Y2114_STRP1 (P68886) UPF0297 protein SPy2114/M5005_Spy1797| Length = 89 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +2 Query: 155 RQVSYVANALYSSMVADGLN*MEMLLGMPLAVSPAAAPLWSE 280 RQ+S A+Y S+ G N + ++G L+ PA P +++ Sbjct: 18 RQISETLTAVYHSLDEKGYNPINQIVGYVLSGDPAYVPRYND 59
>Y1798_STRP3 (P60361) UPF0297 protein SpyM3_1798/SPs1796| Length = 89 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +2 Query: 155 RQVSYVANALYSSMVADGLN*MEMLLGMPLAVSPAAAPLWSE 280 RQ+S A+Y S+ G N + ++G L+ PA P +++ Sbjct: 18 RQISETLTAVYHSLDEKGYNPINQIVGYVLSGDPAYVPRYND 59
>Y1796_STRP6 (Q5X9I2) UPF0297 protein M6_Spy1796| Length = 89 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +2 Query: 155 RQVSYVANALYSSMVADGLN*MEMLLGMPLAVSPAAAPLWSE 280 RQ+S A+Y S+ G N + ++G L+ PA P +++ Sbjct: 18 RQISETLTAVYHSLDEKGYNPINQIVGYVLSGDPAYVPRYND 59
>Y1781_STRPM (Q48QW9) UPF0297 protein M28_Spy1781| Length = 89 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +2 Query: 155 RQVSYVANALYSSMVADGLN*MEMLLGMPLAVSPAAAPLWSE 280 RQ+S A+Y S+ G N + ++G L+ PA P +++ Sbjct: 18 RQISETLTAVYHSLDEKGYNPINQIVGYVLSGDPAYVPRYND 59
>RNP4_AERPE (Q9YD20) Ribonuclease P protein component 4 (EC 3.1.26.5) (RNase P| component 4) Length = 103 Score = 28.1 bits (61), Expect = 9.7 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = -1 Query: 433 DLGPKGPGGVQAVQRPAGGDREQGGGHEP*P 341 D GP+GP R G D QGGGH+ P Sbjct: 76 DKGPQGP------PRQGGRDNRQGGGHQGGP 100
>PALA_ASHGO (Q756C5) pH-response regulator protein palA/RIM20| Length = 631 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +1 Query: 7 GWGISFHPFQTIVNAMTDTIPVEANLLYLFGLKSNC 114 GWG PF+ +N +T+ + +L+YL + S C Sbjct: 268 GWGPEVLPFEKELNDTLNTLQRDNDLIYLQHIPSQC 303
>CSP_PLAYO (P06914) Circumsporozoite protein precursor (CS)| Length = 367 Score = 28.1 bits (61), Expect = 9.7 Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Frame = -1 Query: 424 PKGPGGVQAVQRPAGGDREQGGGHEP*PGA-QEP 326 P+GPG Q P G QG G PGA QEP Sbjct: 198 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGAPQEP 231
>PAX6_DROME (O18381) Paired box protein Pax-6 (Protein eyeless)| Length = 857 Score = 28.1 bits (61), Expect = 9.7 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 Query: 346 MVHAHHLALDLHQPVAEPLEHLQGLW 423 +VH +H AL HQ + P H G W Sbjct: 303 LVHGNHQALQQHQQQSWPPRHYSGSW 328
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = -1 Query: 433 DLGPKGPGGVQAVQRPAGGDREQGGGHEP*P 341 D GP GP G+Q + +G E G EP P Sbjct: 630 DAGPPGPQGLQGIPGTSGPPGENGKPGEPGP 660
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 427 GPKGPGGVQAVQRPAGGDREQGGGHEP*P 341 G GP GVQ PAG + ++G EP P Sbjct: 438 GEPGPAGVQGPPGPAGEEGKRGARGEPGP 466
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.1 bits (61), Expect = 9.7 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 427 GPKGPGGVQAVQRPAGGDREQGGGHEP*P 341 G GP GVQ PAG + ++G EP P Sbjct: 438 GEPGPAGVQGPPGPAGEEGKRGARGEPGP 466 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,304,258 Number of Sequences: 219361 Number of extensions: 1297018 Number of successful extensions: 4414 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 3465 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4326 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
