Clone Name | rbart38a06 |
---|---|
Clone Library Name | barley_pub |
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds Length = 1331 Score = 833 bits (420), Expect = 0.0 Identities = 432/436 (99%) Strand = Plus / Minus Query: 1 aaaaacggatggggcatttcttttcatccatttcaaacaatagtaaatgccatgactgac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aaaaacggatggggcatttcttttcatccatttcaaacaatagtaaatgccatgactgac 1240 Query: 61 acaattccagtggaagcaaatctgctttatttattcggcttaaagagcaactgctgacat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1239 acaattccagtggaagcaaatctgctttatttattcggcttaaagagcaactgctgacat 1180 Query: 121 agtactgtcacagacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1179 agtactgtcacagacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgc 1120 Query: 181 cctttattcatccatggttgccgatggcttaaattaaatggaaatgctgttggggatgcc 240 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1119 cctttattcatccatggttgccgatggcttaaattagatggagatgctgttggggatgcc 1060 Query: 241 cttggcggtaagcccggcagcggcgcccttgtggtcggaggtgttggggtaaagcagcat 300 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1059 cttggcggtaagcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcat 1000 Query: 301 gtagggaaacttagccggtccgttgcggttcttgagctccgggtcatggttcatgcccac 360 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 gtagggaaacttagccgggccgttgcggttcttgagctccgggtcatggttcatgcccac 940 Query: 361 caccttgctctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 939 caccttgctctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctt 880 Query: 421 tgggtccgaggtccac 436 |||||||||||||||| Sbjct: 879 tgggtccgaggtccac 864
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 686 bits (346), Expect = 0.0 Identities = 361/366 (98%) Strand = Plus / Minus Query: 71 tggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtca 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2800 tggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtca 2741 Query: 131 cagacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattca 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2740 cagacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattca 2681 Query: 191 tccatggttgccgatggcttaaattaaatggaaatgctgttggggatgcccttggcggta 250 ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| Sbjct: 2680 tccatggttgccgatggcttagattagatggagatgctgttggggatgcccttggcggta 2621 Query: 251 agcccggcagcggcgcccttgtggtcggaggtgttggggtaaagcagcatgtagggaaac 310 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2620 agcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaac 2561 Query: 311 ttagccggtccgttgcggttcttgagctccgggtcatggttcatgcccaccaccttgctc 370 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2560 ttagccgggccgttgcggttcttgagctccgggtcatggttcatgcccaccaccttgctc 2501 Query: 371 tcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccgag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2500 tcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccgag 2441 Query: 431 gtccac 436 |||||| Sbjct: 2440 gtccac 2435
>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA sequence Length = 1020 Score = 291 bits (147), Expect = 1e-75 Identities = 201/219 (91%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||| ||| Sbjct: 749 atggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtgatcg 690 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 |||||||||||||| |||| ||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 689 gaggtgttggggtagagcaacatgtaggggaacttggccggaccgttgcggttcaacagc 630 Query: 338 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 397 | |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 629 tgcgggtcgtggttcatgcccaccaccttgctctcgatctccactagccgctcgctgaac 570 Query: 398 cgcttgaacacctccagggcctttgggtccgaggtccac 436 ||||||||||||||||||||||| ||||||||||||||| Sbjct: 569 cgcttgaacacctccagggccttggggtccgaggtccac 531
>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence Length = 934 Score = 268 bits (135), Expect = 1e-68 Identities = 193/213 (90%) Strand = Plus / Plus Query: 224 atgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 283 |||||||||||||||||||||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1 atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60 Query: 284 ttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagctccggg 343 || ||||| |||||||||||||| | ||| ||||| |||||||||||| |||| |||| Sbjct: 61 ttagggtagagcagcatgtaggggagcttggccgggccgttgcggttcaacagctgcggg 120 Query: 344 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 403 || ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 121 tcgtggttcatgcccaccaccttgctctcgatctccaccagccgctcrctgaaccgcttg 180 Query: 404 aacacctccagggcctttgggtccgaggtccac 436 ||||||||||||||||| ||||||||||||||| Sbjct: 181 aacacctccagggccttggggtccgaggtccac 213
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 176 bits (89), Expect = 4e-41 Identities = 182/213 (85%) Strand = Plus / Minus Query: 224 atgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 283 |||||||||||||||||||||||||| | ||||| |||||||| || |||||||||| Sbjct: 2591 atgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggaggtg 2532 Query: 284 ttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagctccggg 343 |||||||||||||||||||| || |||| || || || ||||||||||||||| ||| | Sbjct: 2531 ttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagccccgcg 2472 Query: 344 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 403 || |||||||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 2471 tcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgccgg 2412 Query: 404 aacacctccagggcctttgggtccgaggtccac 436 ||| ||||||| ||| | | |||||| |||||| Sbjct: 2411 aacgcctccagcgccctggcgtccgacgtccac 2379
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 176 bits (89), Expect = 4e-41 Identities = 182/213 (85%) Strand = Plus / Minus Query: 224 atgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 283 |||||||||||||||||||||||||| | ||||| |||||||| || |||||||||| Sbjct: 47227 atgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggaggtg 47168 Query: 284 ttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagctccggg 343 |||||||||||||||||||| || |||| || || || ||||||||||||||| ||| | Sbjct: 47167 ttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagccccgcg 47108 Query: 344 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 403 || |||||||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 47107 tcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgccgg 47048 Query: 404 aacacctccagggcctttgggtccgaggtccac 436 ||| ||||||| ||| | | |||||| |||||| Sbjct: 47047 aacgcctccagcgccctggcgtccgacgtccac 47015 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagccc 255 ||||| |||||||||||||||||| ||||||| ||||| Sbjct: 65812 atggagatgctgttggggatgcccatggcggtgagccc 65775 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 281 gtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 65746 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 65690 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Minus Query: 369 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 428 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 65658 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 65599 Query: 429 aggtccac 436 | |||||| Sbjct: 65598 acgtccac 65591 Score = 46.1 bits (23), Expect = 0.095 Identities = 89/111 (80%) Strand = Plus / Minus Query: 326 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 385 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 6075 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 6016 Query: 386 cggtcgctgaaccgcttgaacacctccagggcctttgggtccgaggtccac 436 | |||||||| |||||| | ||||| ||||| ||||| || |||||| Sbjct: 6015 tgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtccac 5965
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 176 bits (89), Expect = 4e-41 Identities = 182/213 (85%) Strand = Plus / Minus Query: 224 atgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 283 |||||||||||||||||||||||||| | ||||| |||||||| || |||||||||| Sbjct: 27803097 atgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggaggtg 27803038 Query: 284 ttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagctccggg 343 |||||||||||||||||||| || |||| || || || ||||||||||||||| ||| | Sbjct: 27803037 ttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagccccgcg 27802978 Query: 344 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 403 || |||||||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 27802977 tcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgccgg 27802918 Query: 404 aacacctccagggcctttgggtccgaggtccac 436 ||| ||||||| ||| | | |||||| |||||| Sbjct: 27802917 aacgcctccagcgccctggcgtccgacgtccac 27802885 Score = 117 bits (59), Expect = 3e-23 Identities = 179/219 (81%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 30026445 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 30026386 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 |||||||| ||||| |||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 30026385 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 30026326 Query: 338 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 397 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 30026325 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 30026266 Query: 398 cgcttgaacacctccagggcctttgggtccgaggtccac 436 ||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 30026265 cgcttgaacgcctccagcgccttggcgtccgacgtccac 30026227 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagccc 255 ||||| |||||||||||||||||| ||||||| ||||| Sbjct: 27821682 atggagatgctgttggggatgcccatggcggtgagccc 27821645 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 281 gtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 27821616 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 27821560 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Minus Query: 369 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 428 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 27821528 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 27821469 Query: 429 aggtccac 436 | |||||| Sbjct: 27821468 acgtccac 27821461 Score = 46.1 bits (23), Expect = 0.095 Identities = 89/111 (80%) Strand = Plus / Minus Query: 326 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 385 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 27761946 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 27761887 Query: 386 cggtcgctgaaccgcttgaacacctccagggcctttgggtccgaggtccac 436 | |||||||| |||||| | ||||| ||||| ||||| || |||||| Sbjct: 27761886 tgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtccac 27761836 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 atgctgttggggatgccctt 243 |||||||||||||||||||| Sbjct: 14300028 atgctgttggggatgccctt 14300047
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 176 bits (89), Expect = 4e-41 Identities = 182/213 (85%) Strand = Plus / Minus Query: 224 atgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 283 |||||||||||||||||||||||||| | ||||| |||||||| || |||||||||| Sbjct: 27894421 atgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggaggtg 27894362 Query: 284 ttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagctccggg 343 |||||||||||||||||||| || |||| || || || ||||||||||||||| ||| | Sbjct: 27894361 ttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagccccgcg 27894302 Query: 344 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 403 || |||||||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 27894301 tcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgccgg 27894242 Query: 404 aacacctccagggcctttgggtccgaggtccac 436 ||| ||||||| ||| | | |||||| |||||| Sbjct: 27894241 aacgcctccagcgccctggcgtccgacgtccac 27894209 Score = 117 bits (59), Expect = 3e-23 Identities = 179/219 (81%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 30117867 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 30117808 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 |||||||| ||||| |||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 30117807 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 30117748 Query: 338 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 397 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 30117747 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 30117688 Query: 398 cgcttgaacacctccagggcctttgggtccgaggtccac 436 ||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 30117687 cgcttgaacgcctccagcgccttggcgtccgacgtccac 30117649 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagccc 255 ||||| |||||||||||||||||| ||||||| ||||| Sbjct: 27913006 atggagatgctgttggggatgcccatggcggtgagccc 27912969 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 281 gtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 27912940 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 27912884 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Minus Query: 369 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 428 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 27912852 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 27912793 Query: 429 aggtccac 436 | |||||| Sbjct: 27912792 acgtccac 27912785 Score = 46.1 bits (23), Expect = 0.095 Identities = 89/111 (80%) Strand = Plus / Minus Query: 326 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 385 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 27853269 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 27853210 Query: 386 cggtcgctgaaccgcttgaacacctccagggcctttgggtccgaggtccac 436 | |||||||| |||||| | ||||| ||||| ||||| || |||||| Sbjct: 27853209 tgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtccac 27853159 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 atgctgttggggatgccctt 243 |||||||||||||||||||| Sbjct: 14295003 atgctgttggggatgccctt 14295022
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 176 bits (89), Expect = 4e-41 Identities = 182/213 (85%) Strand = Plus / Plus Query: 224 atgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 283 |||||||||||||||||||||||||| | ||||| |||||||| || |||||||||| Sbjct: 10796 atgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggaggtg 10855 Query: 284 ttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagctccggg 343 |||||||||||||||||||| || |||| || || || ||||||||||||||| ||| | Sbjct: 10856 ttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagccccgcg 10915 Query: 344 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 403 || |||||||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 10916 tcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgccgg 10975 Query: 404 aacacctccagggcctttgggtccgaggtccac 436 ||| ||||||| ||| | | |||||| |||||| Sbjct: 10976 aacgcctccagcgccctggcgtccgacgtccac 11008 Score = 46.1 bits (23), Expect = 0.095 Identities = 89/111 (80%) Strand = Plus / Plus Query: 326 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 385 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 51948 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 52007 Query: 386 cggtcgctgaaccgcttgaacacctccagggcctttgggtccgaggtccac 436 | |||||||| |||||| | ||||| ||||| ||||| || |||||| Sbjct: 52008 tgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtccac 52058
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 145 bits (73), Expect = 1e-31 Identities = 160/189 (84%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| ||||||||||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 2060 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 2001 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 |||||||||||||| |||||||||||||| |||| || || ||||| | |||| | ||| Sbjct: 2000 gaggtgttggggtagagcagcatgtaggggaactcggcggggccgttcctgttcctcagc 1941 Query: 338 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 397 | |||||| ||||| |||||||||||||| |||||||| |||||| |||||||||| Sbjct: 1940 tgcgggtcgcggttctcgcccaccaccttgccctcgatcttgaccagcgcgtcgctgaac 1881 Query: 398 cgcttgaac 406 | ||||||| Sbjct: 1880 ctcttgaac 1872
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 137 bits (69), Expect = 3e-29 Identities = 159/189 (84%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| ||||||||||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 4658 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 4599 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 ||||||||||| || |||||||||||||| |||| || || ||||| | |||| | ||| Sbjct: 4598 gaggtgttgggatagagcagcatgtaggggaactcggcggggccgttcctgttcctcagc 4539 Query: 338 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 397 | |||||| ||||| |||||||||||||| |||||||| |||||| |||||||||| Sbjct: 4538 tgcgggtcgcggttctcgcccaccaccttgccctcgatcttgaccagcgcgtcgctgaac 4479 Query: 398 cgcttgaac 406 | ||||||| Sbjct: 4478 ctcttgaac 4470
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 137 bits (69), Expect = 3e-29 Identities = 159/189 (84%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| ||||||||||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 2591 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 2532 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 ||||||||||| || |||||||||||||| |||| || || ||||| | |||| | ||| Sbjct: 2531 gaggtgttgggatagagcagcatgtaggggaactcggcggggccgttcctgttcctcagc 2472 Query: 338 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 397 | |||||| ||||| |||||||||||||| |||||||| |||||| |||||||||| Sbjct: 2471 tgcgggtcgcggttctcgcccaccaccttgccctcgatcttgaccagcgcgtcgctgaac 2412 Query: 398 cgcttgaac 406 | ||||||| Sbjct: 2411 ctcttgaac 2403
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA sequence Length = 1129 Score = 119 bits (60), Expect = 8e-24 Identities = 126/148 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||||||||||||| |||| || ||||| | || |||| |||||||| Sbjct: 902 atggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtggtcg 843 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 |||||||||||||| |||||||||||||| ||||| ||||| ||| |||||||||||||| Sbjct: 842 gaggtgttggggtagagcagcatgtaggggaacttggccggcccggtgcggttcttgagc 783 Query: 338 tccgggtcatggttcatgcccaccacct 365 |||||| ||||||| ||||||||| Sbjct: 782 cgcgggtccccgttcatggccaccacct 755
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 117 bits (59), Expect = 3e-23 Identities = 179/219 (81%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2609 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2550 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 |||||||| ||||| |||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 2549 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 2490 Query: 338 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 397 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 2489 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 2430 Query: 398 cgcttgaacacctccagggcctttgggtccgaggtccac 436 ||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 2429 cgcttgaacgcctccagcgccttggcgtccgacgtccac 2391
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 117 bits (59), Expect = 3e-23 Identities = 179/219 (81%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2691 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2632 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 |||||||| ||||| |||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 2631 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 2572 Query: 338 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 397 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 2571 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 2512 Query: 398 cgcttgaacacctccagggcctttgggtccgaggtccac 436 ||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 2511 cgcttgaacgcctccagcgccttggcgtccgacgtccac 2473
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 117 bits (59), Expect = 3e-23 Identities = 179/219 (81%) Strand = Plus / Plus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 81306 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 81365 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 |||||||| ||||| |||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 81366 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 81425 Query: 338 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 397 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 81426 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 81485 Query: 398 cgcttgaacacctccagggcctttgggtccgaggtccac 436 ||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 81486 cgcttgaacgcctccagcgccttggcgtccgacgtccac 81524
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 117 bits (59), Expect = 3e-23 Identities = 179/219 (81%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2724 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2665 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 |||||||| ||||| |||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 2664 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 2605 Query: 338 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 397 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 2604 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 2545 Query: 398 cgcttgaacacctccagggcctttgggtccgaggtccac 436 ||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 2544 cgcttgaacgcctccagcgccttggcgtccgacgtccac 2506
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 105 bits (53), Expect = 1e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 216 aaatggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 275 ||||||| |||||||| || |||||||||||||| | ||||| ||| ||||||| || Sbjct: 2620 aaatggagatgctgtttggaatgcccttggcggtgatgccggcggcgtcgcccttcgtgt 2561 Query: 276 cggaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttga 335 |||||||||||||||| |||||| ||||||| |||| ||||| |||||||||||||||| Sbjct: 2560 cggaggtgttggggtagagcagcgtgtaggggaactcggccgggccgttgcggttcttga 2501 Query: 336 g 336 | Sbjct: 2500 g 2500 Score = 40.1 bits (20), Expect = 5.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 369 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 428 |||||||||| |||||| ||| ||||||||||||| ||||| | ||||| | ||||| Sbjct: 2467 tctcgatctcggtcagccgcgcgccgaaccgcttgaacgcctcctgcgccttggcgtccg 2408 Query: 429 aggtccac 436 | |||||| Sbjct: 2407 acgtccac 2400
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 101 bits (51), Expect = 2e-18 Identities = 177/219 (80%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| ||||||||| ||||||| ||||| | || ||| |||||||| Sbjct: 2654 atggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtggtcg 2595 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 |||||||| ||||| ||||||||||| || ||||| ||||| ||| |||||||||| ||| Sbjct: 2594 gaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggttctttagc 2535 Query: 338 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 397 | |||||| ||||||| ||||||||| ||||||| || ||||| | | |||| Sbjct: 2534 tgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcgccccgaac 2475 Query: 398 cgcttgaacacctccagggcctttgggtccgaggtccac 436 ||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 2474 cgcttgaacgcctccagcgccttggcgtccgacgtccac 2436
>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence Length = 810 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 792 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 733 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 732 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 674
>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence Length = 805 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 277 ||||| |||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 278 gaggtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 71.9 bits (36), Expect = 2e-09 Identities = 126/156 (80%) Strand = Plus / Minus Query: 281 gtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagctcc 340 ||||||||||| |||||||||||||| | ||| | || ||||| |||||||||||| || Sbjct: 2694 gtgttggggtacagcagcatgtagggcatcttcacgggcccgttccggttcttgagcgcc 2635 Query: 341 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 400 ||||| | ||||||| | | | | |||||||||||||||||||| || ||||| | Sbjct: 2634 gggtccttgttcatgtcgaggatccgcttctcgatctccaccagccggctgccgaacctc 2575 Query: 401 ttgaacacctccagggcctttgggtccgaggtccac 436 |||||| |||| || ||||| | |||||| |||||| Sbjct: 2574 ttgaacgcctcgagcgccttggcgtccgacgtccac 2539 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 226 gctgttggggatgcccttggcggtaagccc 255 |||||||||||||||| ||||||| ||||| Sbjct: 2752 gctgttggggatgcccatggcggtgagccc 2723
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagccc 255 ||||| |||||||||||||||||| ||||||| ||||| Sbjct: 2442 atggagatgctgttggggatgcccatggcggtgagccc 2405 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 281 gtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2376 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2320 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Minus Query: 369 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 428 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 2288 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 2229 Query: 429 aggtccac 436 | |||||| Sbjct: 2228 acgtccac 2221
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagccc 255 ||||| |||||||||||||||||| ||||||| ||||| Sbjct: 2921 atggagatgctgttggggatgcccatggcggtgagccc 2884 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 281 gtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2855 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2799 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Minus Query: 369 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 428 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 2767 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 2708 Query: 429 aggtccac 436 | |||||| Sbjct: 2707 acgtccac 2700
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagccc 255 ||||| |||||||||||||||||| ||||||| ||||| Sbjct: 2915 atggagatgctgttggggatgcccatggcggtgagccc 2878 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 281 gtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2849 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2793 Score = 40.1 bits (20), Expect = 5.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 369 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 428 ||||||| |||||||||||| || ||||| | ||||| | ||||| ||||| | ||||| Sbjct: 2761 tctcgatatccaccagccggctgccgaacctcctgaacgcgtccagcgccttggcgtccg 2702 Query: 429 aggtccac 436 | |||||| Sbjct: 2701 acgtccac 2694
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full insert sequence Length = 1560 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagccc 255 ||||| |||||||||||||||||| ||||||| ||||| Sbjct: 1328 atggagatgctgttggggatgcccatggcggtgagccc 1291 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 281 gtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 1262 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 1206 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Minus Query: 369 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 428 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 1174 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 1115 Query: 429 aggtccac 436 | |||||| Sbjct: 1114 acgtccac 1107
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagccc 255 ||||| |||||||||||||||||| ||||||| ||||| Sbjct: 2593 atggagatgctgttggggatgcccatggcggtgagccc 2556 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 281 gtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2527 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2471 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Minus Query: 369 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 428 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 2439 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 2380 Query: 429 aggtccac 436 | |||||| Sbjct: 2379 acgtccac 2372
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagccc 255 ||||| |||||||||||||||||| ||||||| ||||| Sbjct: 2923 atggagatgctgttggggatgcccatggcggtgagccc 2886 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 281 gtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2857 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2801 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Minus Query: 369 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 428 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 2769 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 2710 Query: 429 aggtccac 436 | |||||| Sbjct: 2709 acgtccac 2702
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full insert sequence Length = 1726 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagccc 255 ||||| |||||||||||||||||| ||||||| ||||| Sbjct: 1493 atggagatgctgttggggatgcccatggcggtgagccc 1456 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 281 gtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgagc 337 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 1427 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 1371 Score = 48.1 bits (24), Expect = 0.024 Identities = 57/68 (83%) Strand = Plus / Minus Query: 369 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 428 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 1339 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 1280 Query: 429 aggtccac 436 | |||||| Sbjct: 1279 acgtccac 1272
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds Length = 1814 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggc 246 ||||| ||||||||||||||||||||||| Sbjct: 1552 atggagatgctgttggggatgcccttggc 1524 Score = 40.1 bits (20), Expect = 5.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 281 gtgttggggtaaagcagcatgtagggaaacttagccggtccgttgcggttcttgag 336 ||||||||||| || ||||||||||| || || || || || || ||||||||||| Sbjct: 1486 gtgttggggtagagtagcatgtaggggaattttgctggcccattccggttcttgag 1431
>ref|XM_469401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2726 Score = 46.1 bits (23), Expect = 0.095 Identities = 89/111 (80%) Strand = Plus / Minus Query: 326 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 385 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 2480 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 2421 Query: 386 cggtcgctgaaccgcttgaacacctccagggcctttgggtccgaggtccac 436 | |||||||| |||||| | ||||| ||||| ||||| || |||||| Sbjct: 2420 tgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtccac 2370
>dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 mRNA for 9-lipoxigenase, complete cds Length = 2988 Score = 46.1 bits (23), Expect = 0.095 Identities = 89/111 (80%) Strand = Plus / Minus Query: 326 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 385 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 2546 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 2487 Query: 386 cggtcgctgaaccgcttgaacacctccagggcctttgggtccgaggtccac 436 | |||||||| |||||| | ||||| ||||| ||||| || |||||| Sbjct: 2486 tgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtccac 2436
>dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132L12, full insert sequence Length = 2830 Score = 46.1 bits (23), Expect = 0.095 Identities = 89/111 (80%) Strand = Plus / Minus Query: 326 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 385 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 2554 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 2495 Query: 386 cggtcgctgaaccgcttgaacacctccagggcctttgggtccgaggtccac 436 | |||||||| |||||| | ||||| ||||| ||||| || |||||| Sbjct: 2494 tgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtccac 2444
>gb|AC073862.36| Homo sapiens 12q BAC RP11-243M5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 71517 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 caaacaatagtaaatgccatga 55 |||||||||||||||||||||| Sbjct: 20738 caaacaatagtaaatgccatga 20717
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 216 aaatggaaatgctgttggggatgccc 241 ||||||| |||||||||||||||||| Sbjct: 22970458 aaatggagatgctgttggggatgccc 22970433
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 218 atggaaatgctgttggggatgcccttggcggtaagccc 255 ||||| ||||||||||| |||||| |||| |||||||| Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagccc 2859
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 216 aaatggaaatgctgttggggatgccc 241 ||||||| |||||||||||||||||| Sbjct: 22898649 aaatggagatgctgttggggatgccc 22898624
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 216 aaatggaaatgctgttggggatgccc 241 ||||||| |||||||||||||||||| Sbjct: 79735 aaatggagatgctgttggggatgccc 79710
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 216 aaatggaaatgctgttggggatgccc 241 ||||||| |||||||||||||||||| Sbjct: 2914 aaatggagatgctgttggggatgccc 2889
>emb|CR339058.11| Zebrafish DNA sequence from clone CH211-135H16 in linkage group 23, complete sequence Length = 110857 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 tgaacacctccagggcctttg 422 ||||||||||||||||||||| Sbjct: 41562 tgaacacctccagggcctttg 41542
>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene) Length = 2967 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 216 aaatggaaatgctgttggggatgcc 240 ||||||| ||||||||||||||||| Sbjct: 2772 aaatggagatgctgttggggatgcc 2748
>emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:2 gene) Length = 3023 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 attaaatggaaatgctgttggggatgccc 241 ||||||||||||||||||| || |||||| Sbjct: 2895 attaaatggaaatgctgttcggaatgccc 2867
>emb|BX548074.9| Zebrafish DNA sequence from clone CH211-11F6 in linkage group 23, complete sequence Length = 167014 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 tgaacacctccagggcctttg 422 ||||||||||||||||||||| Sbjct: 98945 tgaacacctccagggcctttg 98925
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 274 gtcggaggtgttggggtaaagcagcatgtaggg 306 |||||||||||||||| | |||||| ||||||| Sbjct: 1892951 gtcggaggtgttgggggacagcagcgtgtaggg 1892983
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 274 gtcggaggtgttggggtaaagcagcatgtaggg 306 |||||||||||||||| | |||||| ||||||| Sbjct: 21731 gtcggaggtgttgggggacagcagcgtgtaggg 21763
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 274 gtcggaggtgttggggtaaagcagcatgtaggg 306 |||||||||||||||| | |||||| ||||||| Sbjct: 93429 gtcggaggtgttgggggacagcagcgtgtaggg 93461
>gb|AC134914.5| Mus musculus BAC clone RP23-227C5 from 9, complete sequence Length = 206831 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 catttcaaacaatagtaaatg 49 ||||||||||||||||||||| Sbjct: 157783 catttcaaacaatagtaaatg 157803
>ref|NM_105423.2| Arabidopsis thaliana iron ion binding / lipoxygenase AT1G67560 mRNA, complete cds Length = 2928 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 taaatggaaatgctgttggg 234 |||||||||||||||||||| Sbjct: 2780 taaatggaaatgctgttggg 2761
>emb|AL954222.1| Pan troglodytes chromosome 22 clone q21.2, complete sequence Length = 208827 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 355 gcccaccaccttgctctcgatctccaccagcc 386 |||||||||||||||| | || |||||||||| Sbjct: 200815 gcccaccaccttgctccccatgtccaccagcc 200784
>gb|AC087893.15| Homo sapiens 12 BAC RP11-423G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 207829 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ttaaattaaatggaaatgct 228 |||||||||||||||||||| Sbjct: 136709 ttaaattaaatggaaatgct 136728
>emb|AL163278.2|HS21C078 Homo sapiens chromosome 21 segment HS21C078 Length = 340000 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 355 gcccaccaccttgctctcgatctccaccagcc 386 |||||||||||||||| | || |||||||||| Sbjct: 205921 gcccaccaccttgctccccatgtccaccagcc 205890
>gb|BT010546.1| Arabidopsis thaliana At1g67560 gene, complete cds Length = 2754 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 taaatggaaatgctgttggg 234 |||||||||||||||||||| Sbjct: 2753 taaatggaaatgctgttggg 2734
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 gctgttggggatgcccttggcggt 249 ||||||||||||||||||| |||| Sbjct: 137475 gctgttggggatgcccttgccggt 137452
>emb|AL078613.10|HSA354I12 Human DNA sequence from clone RP11-354I12 on chromosome 22 Contains an STS and GSSs, complete sequence Length = 60837 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cacagacacacactacacca 148 |||||||||||||||||||| Sbjct: 58806 cacagacacacactacacca 58825
>gb|AY038877.1|AY038861S16 Mus musculus protein tyrosine phosphatase receptor-like protein J (Ptprj) gene, exons 2 through 24 and complete cds Length = 70607 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tcttttcatccatttcaaac 38 |||||||||||||||||||| Sbjct: 577 tcttttcatccatttcaaac 558
>emb|AJ748537.1| Arabidopsis thaliana mRNA for 13-lipoxygenase (AtLOX6 gene) Length = 2754 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 taaatggaaatgctgttggg 234 |||||||||||||||||||| Sbjct: 2753 taaatggaaatgctgttggg 2734
>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein S2 (Rps2), a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7) pseudogene, a pseudogene similar to part of a novel protein, a novel gene and a eukaryotic translation initiation factor pseudogene, complete sequence Length = 196006 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 ttcttgagctccgggtcatg 348 |||||||||||||||||||| Sbjct: 51161 ttcttgagctccgggtcatg 51142
>emb|BX571955.15| Zebrafish DNA sequence from clone DKEY-27B3 in linkage group 10, complete sequence Length = 272498 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 aattaaatggaaatgctgtt 231 |||||||||||||||||||| Sbjct: 203676 aattaaatggaaatgctgtt 203695
>gb|AC091589.8| Homo sapiens chromosome 18, clone RP11-635B11, complete sequence Length = 177680 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 catttcaaacaatagtaaat 48 |||||||||||||||||||| Sbjct: 117375 catttcaaacaatagtaaat 117394
>gb|AY081253.1| Arabidopsis thaliana putative lipoxygenase (At1g67560) mRNA, complete cds Length = 2928 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 taaatggaaatgctgttggg 234 |||||||||||||||||||| Sbjct: 2780 taaatggaaatgctgttggg 2761
>dbj|AK222124.1| Arabidopsis thaliana mRNA for putative lipoxygenase, complete cds, clone: RAFL22-94-C21 Length = 1203 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 taaatggaaatgctgttggg 234 |||||||||||||||||||| Sbjct: 1065 taaatggaaatgctgttggg 1046
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 atgctgttggggatgccctt 243 |||||||||||||||||||| Sbjct: 49257 atgctgttggggatgccctt 49276
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 atgctgttggggatgccctt 243 |||||||||||||||||||| Sbjct: 111416 atgctgttggggatgccctt 111435
>gb|AF064858.2|AF064858 Homo sapiens chromosome 21 clone BAC 28F9, map 21q22.3, complete sequence Length = 194769 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 355 gcccaccaccttgctctcgatctccaccagcc 386 |||||||||||||||| | || |||||||||| Sbjct: 93205 gcccaccaccttgctccccatgtccaccagcc 93174
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 gctgttggggatgcccttggcggt 249 ||||||||||||||||||| |||| Sbjct: 20830414 gctgttggggatgcccttgccggt 20830391
>emb|BX816626.1|CNS0AAKP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZE11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2857 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 taaatggaaatgctgttggg 234 |||||||||||||||||||| Sbjct: 2769 taaatggaaatgctgttggg 2750
>gb|AC011020.8|AC011020 Arabidopsis thaliana chromosome 1 BAC F12B7 genomic sequence, complete sequence Length = 91529 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 taaatggaaatgctgttggg 234 |||||||||||||||||||| Sbjct: 56566 taaatggaaatgctgttggg 56547
>dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046P13, full insert sequence Length = 3010 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 gctgttggggatgcccttggcggt 249 ||||||||||||||||||| |||| Sbjct: 2681 gctgttggggatgcccttgccggt 2658
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence Length = 568 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 tctcgatctccaccagccgg 388 |||||||||||||||||||| Sbjct: 209 tctcgatctccaccagccgg 190
>emb|AL954223.1| Pan troglodytes chromosome 22 clone PTB-187O16 map q21.2, complete sequence Length = 165877 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 355 gcccaccaccttgctctcgatctccaccagcc 386 |||||||||||||||| | || |||||||||| Sbjct: 63036 gcccaccaccttgctccccatgtccaccagcc 63005
>emb|CR925790.6| Zebrafish DNA sequence from clone DKEY-275J21 in linkage group 10, complete sequence Length = 136117 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 aattaaatggaaatgctgtt 231 |||||||||||||||||||| Sbjct: 51857 aattaaatggaaatgctgtt 51876
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 gctgttggggatgcccttggcggt 249 ||||||||||||||||||| |||| Sbjct: 21140649 gctgttggggatgcccttgccggt 21140626
>emb|AL954341.14| Mouse DNA sequence from clone RP23-213D14 on chromosome 2, complete sequence Length = 178273 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tcttttcatccatttcaaac 38 |||||||||||||||||||| Sbjct: 123612 tcttttcatccatttcaaac 123631
>gb|AC005144.1|AC005144 Homo sapiens chromosome 17, clone hRPK.465_C_12, complete sequence Length = 73362 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ttcaaacaatagtaaatgcc 51 |||||||||||||||||||| Sbjct: 8635 ttcaaacaatagtaaatgcc 8616
>emb|AL954813.14| Mouse DNA sequence from clone RP24-541E15 on chromosome 4, complete sequence Length = 140383 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cacagacacacactacacca 148 |||||||||||||||||||| Sbjct: 40251 cacagacacacactacacca 40232 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,309,909 Number of Sequences: 3902068 Number of extensions: 4309909 Number of successful extensions: 83792 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83413 Number of HSP's gapped (non-prelim): 363 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)