>ref|XM_550206.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1134

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 299 gttcacatggcacgccccatagtctgctccgtaggtggcatcatgacgacgacagagcgc 358
           ||||||||| |||| ||||||||||||||| | |||||| ||||||| | |||||| |||
Sbjct: 857 gttcacatgccacgacccatagtctgctcctttggtggcgtcatgaccaagacagatcgc 798

                    
Query: 359 ccgtagaag 367
           |||| ||||
Sbjct: 797 ccgttgaag 789

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                           
Query: 299     gttcacatggcacgccccatagtctgctccgtaggtggcatcatgacgacgacagagcgc 358
               ||||||||| |||| ||||||||||||||| | |||||| ||||||| | |||||| |||
Sbjct: 3045851 gttcacatgccacgacccatagtctgctcctttggtggcgtcatgaccaagacagatcgc 3045792

                        
Query: 359     ccgtagaag 367
               |||| ||||
Sbjct: 3045791 ccgttgaag 3045783



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 187      atcacattacaacatgttga 206
                ||||||||||||||||||||
Sbjct: 16089389 atcacattacaacatgttga 16089370

>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0011G08
          Length = 139490

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                          
Query: 299    gttcacatggcacgccccatagtctgctccgtaggtggcatcatgacgacgacagagcgc 358
              ||||||||| |||| ||||||||||||||| | |||||| ||||||| | |||||| |||
Sbjct: 127368 gttcacatgccacgacccatagtctgctcctttggtggcgtcatgaccaagacagatcgc 127309

                       
Query: 359    ccgtagaag 367
              |||| ||||
Sbjct: 127308 ccgttgaag 127300

>dbj|AK072658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134D11, full
           insert sequence
          Length = 1134

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 299 gttcacatggcacgccccatagtctgctccgtaggtggcatcatgacgacgacagagcgc 358
           ||||||||| |||| ||||||||||||||| | |||||| ||||||| | |||||| |||
Sbjct: 857 gttcacatgccacgacccatagtctgctcctttggtggcgtcatgaccaagacagatcgc 798

                    
Query: 359 ccgtagaag 367
           |||| ||||
Sbjct: 797 ccgttgaag 789

>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                         
Query: 299   gttcacatggcacgccccatagtctgctccgtaggtggcatcatgacgacgacagagcgc 358
             ||||||||| |||| ||||||||||||||| | |||||| ||||||| | |||||| |||
Sbjct: 13891 gttcacatgccacgacccatagtctgctcctttggtggcgtcatgaccaagacagatcgc 13832

                      
Query: 359   ccgtagaag 367
             |||| ||||
Sbjct: 13831 ccgttgaag 13823

>gb|BT017175.1| Zea mays clone EL01N0369B02.c mRNA sequence
          Length = 764

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 301 tcacatggcacgccccatagtctgctccgtaggtggcatcatgac 345
           ||||||| |||||||||| ||||||||| | || |||||||||||
Sbjct: 425 tcacatgccacgccccatggtctgctccatgggcggcatcatgac 381

>gb|AY104312.1| Zea mays PCO074362 mRNA sequence
          Length = 2610

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 301  tcacatggcacgccccatagtctgctccgtaggtggcatcatgac 345
            ||||||| |||||||||| ||||||||| | || |||||||||||
Sbjct: 2292 tcacatgccacgccccatggtctgctccatgggcggcatcatgac 2248

>emb|AL596114.10| Human DNA sequence from clone RP11-274A8 on chromosome 13 Containd the 3'
              end of a novel gene (KIAA0774), a novel gene, the SLC7A1
              gene for solute carrier family 7 (cationic amino acid
              transporter, y+ system), member 1, and a CpG island,
              complete sequence
          Length = 173191

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 175    cacattcacataatcacattac 196
              ||||||||||||||||||||||
Sbjct: 139656 cacattcacataatcacattac 139677

>gb|AC108840.13| Mus musculus chromosome 1, clone RP23-348P7, complete sequence
          Length = 209336

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 28     actaaatttgggctctgacataaat 52
              |||||||||||||||||||| ||||
Sbjct: 129678 actaaatttgggctctgacaaaaat 129654

>emb|AL590807.13| Human DNA sequence from clone RP11-325L2 on chromosome 13 Contains an
              ADP-ribosylation factor pseudogene, complete sequence
          Length = 178914

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 242    aaaagatccaagacaacacaa 262
              |||||||||||||||||||||
Sbjct: 168737 aaaagatccaagacaacacaa 168717

>emb|BX511303.8| Zebrafish DNA sequence from clone DKEY-227L13 in linkage group 14,
             complete sequence
          Length = 190512

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   ttgaggttcacattcacataa 187
             |||||||||||||||||||||
Sbjct: 59448 ttgaggttcacattcacataa 59428

>ref|XM_665972.1| Plasmodium berghei strain ANKA tRNA ligase (PB000375.01.0), partial
           mRNA
          Length = 903

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 16  ctatatgtgcccactaaattt 36
           |||||||||||||||||||||
Sbjct: 311 ctatatgtgcccactaaattt 291

>ref|XM_482865.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1865

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ttcacataatcacattacaa 198
            ||||||||||||||||||||
Sbjct: 1738 ttcacataatcacattacaa 1719

>gb|AC127306.3| Mus musculus BAC clone RP23-290H17 from chromosome 7, complete sequence
          Length = 204478

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     acataaatttaggagtagag 64
              ||||||||||||||||||||
Sbjct: 129115 acataaatttaggagtagag 129134

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 23      tgcccactaaatttgggctc 42
               ||||||||||||||||||||
Sbjct: 1652064 tgcccactaaatttgggctc 1652083

>gb|AC133646.4| Mus musculus BAC clone RP23-254F11 from chromosome 18, complete sequence
          Length = 209764

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    ccaagacaacacaacatcaa 268
              ||||||||||||||||||||
Sbjct: 128742 ccaagacaacacaacatcaa 128761

>gb|AC110784.3| Homo sapiens BAC clone RP11-417D8 from 7, complete sequence
          Length = 38891

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   gcacacatcatattgcagtt 89
            ||||||||||||||||||||
Sbjct: 7297 gcacacatcatattgcagtt 7316

>emb|AL358216.33| Human DNA sequence from clone RP11-809C18 on chromosome 10 Contains two
             novel genes, the gene for a novel protein (FLJ38694
             FLJ38681) and five CpG islands, complete sequence
          Length = 96891

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   cacattcacataatcacatt 194
             ||||||||||||||||||||
Sbjct: 66841 cacattcacataatcacatt 66860

>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07,
             complete sequence
          Length = 87592

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    tgcccactaaatttgggctc 42
             ||||||||||||||||||||
Sbjct: 60286 tgcccactaaatttgggctc 60305

>gb|AC144535.4| Homo sapiens 12 BAC RP11-191K23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 156422

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    gcacacatcatattgcagtt 89
             ||||||||||||||||||||
Sbjct: 49113 gcacacatcatattgcagtt 49132

>gb|AC013701.6| Homo sapiens, clone RP11-22C8, complete sequence
          Length = 160275

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    atgacattattctgtattta 227
              ||||||||||||||||||||
Sbjct: 151763 atgacattattctgtattta 151744

>dbj|AP006336.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07E09, TM0293,
             complete sequence
          Length = 113091

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   aaggtgaaaagatccaagac 255
             ||||||||||||||||||||
Sbjct: 91779 aaggtgaaaagatccaagac 91798

>gb|AC044893.5| Homo sapiens chromosome 8, clone RP11-696E24, complete sequence
          Length = 190121

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   atgacattattctgtattta 227
             ||||||||||||||||||||
Sbjct: 49124 atgacattattctgtattta 49105

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 179      ttcacataatcacattacaa 198
                ||||||||||||||||||||
Sbjct: 23037085 ttcacataatcacattacaa 23037066

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 23      tgcccactaaatttgggctc 42
               ||||||||||||||||||||
Sbjct: 1652062 tgcccactaaatttgggctc 1652081

>dbj|AP003854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0093M23
          Length = 134578

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   atcacattacaacatgttga 206
             ||||||||||||||||||||
Sbjct: 45552 atcacattacaacatgttga 45533

>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0470B03
          Length = 163371

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   ttcacataatcacattacaa 198
             ||||||||||||||||||||
Sbjct: 96813 ttcacataatcacattacaa 96794

>gb|AC152450.4| Mus musculus BAC clone RP24-342M21 from 18, complete sequence
          Length = 161106

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    ccaagacaacacaacatcaa 268
              ||||||||||||||||||||
Sbjct: 145938 ccaagacaacacaacatcaa 145919

>dbj|AK063363.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-D04, full
            insert sequence
          Length = 1865

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  ttcacataatcacattacaa 198
            ||||||||||||||||||||
Sbjct: 1738 ttcacataatcacattacaa 1719

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     atcatgacgacgacagagcg 357
               ||||||||||||||||||||
Sbjct: 2064517 atcatgacgacgacagagcg 2064536

>dbj|AP007265.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11L01, TM1658,
             complete sequence
          Length = 99089

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   aaggtgaaaagatccaagac 255
             ||||||||||||||||||||
Sbjct: 53954 aaggtgaaaagatccaagac 53935

>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    tgcccactaaatttgggctc 42
             ||||||||||||||||||||
Sbjct: 64527 tgcccactaaatttgggctc 64546


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,790,327
Number of Sequences: 3902068
Number of extensions: 2790327
Number of successful extensions: 49865
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49718
Number of HSP's gapped (non-prelim): 147
length of query: 367
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 345
effective length of database: 17,147,199,772
effective search space: 5915783921340
effective search space used: 5915783921340
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)