Clone Name | rbart37h10 |
---|---|
Clone Library Name | barley_pub |
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 38.5 bits (88), Expect = 0.009 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -1 Query: 464 AAGFKDVASACCGGGRLRAQTWCSPNAT-YCANRNDHVYWDEVHGTQ 327 A GF++ CC G L A C + + C N + +++WD VH TQ Sbjct: 468 AYGFEETKKPCCKTGLLSAGALCKKSTSKICPNTSSYLFWDGVHPTQ 514
>GDF8_BUBBU (Q6X5V1) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 31.6 bits (70), Expect = 1.0 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 +R E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 ERSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_SYLGR (Q5USV6) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H K Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFLFLQKYPHTHLVHQANPK 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_SHEEP (O18830) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H K Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFLFLQKYPHTHLVHQANPK 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_HEMJE (Q5USV8) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H K Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFLFLQKYPHTHLVHQANPK 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_CAPIB (Q5USV9) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H K Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFLFLQKYPHTHLVHQANPK 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_CAPHI (Q6T5B8) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 8/67 (11%) Frame = -3 Query: 177 DREKEKRCTYTSFRFFLWIDGDAI--------ESYIERGCPDACKFIFKQKWPNGPEIHT 22 + E RC R+ L +D +A+ + Y C C+F+F QK+P+ +H Sbjct: 274 EHSTESRCC----RYPLTVDFEAVGWDWIIAPKRYKANYCSGECEFLFLQKYPHTHLVHQ 329 Query: 21 RIKKGKA 1 KG A Sbjct: 330 ANPKGSA 336
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = -1 Query: 467 EAAGFKDVASACCGGGRLRAQTWCSPNA-TYCANRNDHVYWDEVHGTQ 327 E GF+++ CC G + +C +N + +++WD +H +Q Sbjct: 384 EDYGFEEIKKPCCKIGLTKGGVFCKERTLKNMSNASSYLFWDGLHPSQ 431
>GDF8_VULVU (Q6DTL9) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCRRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_TAUDE (Q5USW0) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_PIG (O18831) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_MELGA (O42221) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_MACFA (Q95J86) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_LEPCA (Q8HY52) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_HUMAN (O14793) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_HORSE (Q9GM97) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_CHICK (O42220) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_CANFA (Q6UKZ8) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_BOVIN (O18836) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_BOSIN (Q5RZV4) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_BOSGA (Q5USW1) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_ANTAM (Q5USV5) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_ALOLA (Q6J1J2) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCRRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_AEPME (Q5USV7) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 274 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 333 Query: 9 GKA 1 G A Sbjct: 334 GSA 336
>GDF8_RAT (O35312) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 376 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 275 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 334 Query: 9 GKA 1 G A Sbjct: 335 GSA 337
>GDF8_MOUSE (O08689) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 376 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 177 DREKEKRCTY----TSFRFFLWIDGDAIESYIERGCPDACKFIFKQKWPNGPEIHTRIKK 10 + E RC F F W A + Y C C+F+F QK+P+ +H + Sbjct: 275 EHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPR 334 Query: 9 GKA 1 G A Sbjct: 335 GSA 337
>GDF8_PAPHA (O18828) Growth/differentiation factor 8 precursor (GDF-8)| (Myostatin) Length = 375 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 8/67 (11%) Frame = -3 Query: 177 DREKEKRCTYTSFRFFLWIDGDAI--------ESYIERGCPDACKFIFKQKWPNGPEIHT 22 + E RC R+ L +D +A+ + Y C C+F+F QK+P+ +H Sbjct: 274 EHSTESRCC----RYPLTVDFEALGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQ 329 Query: 21 RIKKGKA 1 +G A Sbjct: 330 ANPRGSA 336
>DSH_DROME (P51140) Segment polarity protein dishevelled| Length = 623 Score = 28.9 bits (63), Expect = 6.8 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -3 Query: 384 HLLRQSQRPCVLGRGAWHPGHLQQGRQGH 298 +++ + + P +LGRG HP L G GH Sbjct: 474 YVVNEERNPNLLGRGHLHPHQLPHGHGGH 502
>FAD6E_BRAJU (Q39287) Omega-6 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) (Delta-12 desaturase) Length = 384 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = +1 Query: 199 GGRAIMHRSPI*EETSCLKLMGAAKPSFT-GAAKMALAPLLEVAWVPCTSSQYTWSLRLA 375 GGR + SP ET LK + P FT G K A+ P +P + S W + +A Sbjct: 4 GGRMQVSPSPKKSETDTLKRVPCETPPFTVGELKKAIPPHCFKRSIPRSFSYLIWDIIVA 63
>LRFN4_MOUSE (Q80XU8) Leucine-rich repeat and fibronectin type-III| domain-containing protein 4 precursor Length = 636 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/88 (22%), Positives = 34/88 (38%) Frame = +1 Query: 103 FYCISIDPQKESKRRVSTSFLLLSIKSKLTTDGGRAIMHRSPI*EETSCLKLMGAAKPSF 282 + CI+ +P E+ RV L L + +GGR + +A+ + Sbjct: 349 YTCIATNPAGEATARVELRVLALPHGGNTSAEGGR-----------PGPSDIAASARTAA 397 Query: 283 TGAAKMALAPLLEVAWVPCTSSQYTWSL 366 G + P ++V V TS +W L Sbjct: 398 EGEGTLESEPAVQVTEVTATSGLVSWGL 425 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,684,298 Number of Sequences: 219361 Number of extensions: 1081246 Number of successful extensions: 2894 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 2785 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2893 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)